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MC11g1255 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1255
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationMC11:13450272..13450703
RNA-Seq ExpressionMC11g1255
SyntenyMC11g1255
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]6.79e-1430.43Show/hide
Query:  VRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKK
        + F  + IN   G+ N  +    E++    +EQ++E  + I      W +S  G  +    ++   A VW + + +RL+ +++  +I  NRA+++Y +  
Subjt:  VRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKK

Query:  GTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA
        G   N G LI ++IR+C++K  G L FP LI+ELC+Q+
Subjt:  GTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.22e-1227.48Show/hide
Query:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG
        INT YGL ++ +   +E +   ++ ++      +      W VS+ G  +     +N  A +W + +K+RL+PT++   +   R +++Y +  G   N G
Subjt:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG

Query:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA
         +I  EI +C+ +  G L FP LI  +C  A
Subjt:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]2.67e-1228.24Show/hide
Query:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG
        INT YGL +  +   +E +   ++ ++      +      W VS+ G  +     +N  A VW + +K+RL+PT++  ++   R +++Y +  G   N G
Subjt:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG

Query:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA
        ++I  EI + + +  G L FP LIT +C  A
Subjt:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]3.17e-4972.58Show/hide
Query:  VVRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILK
        +V+   + IN + G  +   V GNE++VHPSDEQVEEARRLICRP KTWT+STMGK+SLK LDINEQA VW YVVKNRLIPTS DSSIK NRAM+VYIL 
Subjt:  VVRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILK

Query:  KGTEFNFGELIRNEIRSCSKKMVG
        KG EFNFGELIRNEI+SCS+K+ G
Subjt:  KGTEFNFGELIRNEIRSCSKKMVG

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]1.02e-2270Show/hide
Query:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA
        +W+YVVKN LI TS DSSI+  R M+VYIL KG EFNF ELIRNEI  C++KMVGPLIFP  I ELCL+A
Subjt:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA

TrEMBL top hitse value%identityAlignment
A0A2P5BNT0 Uncharacterized protein (Fragment)1.07e-1227.48Show/hide
Query:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG
        INT YGL ++ +   +E +   ++ ++      +      W VS+ G  +     +N  A +W + +K+RL+PT++   +   R +++Y +  G   N G
Subjt:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG

Query:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA
         +I  EI +C+ +  G L FP LI  +C  A
Subjt:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA

A0A2P5CPE8 Uncharacterized protein1.29e-1228.24Show/hide
Query:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG
        INT YGL +  +   +E +   ++ ++      +      W VS+ G  +     +N  A VW + +K+RL+PT++  ++   R +++Y +  G   N G
Subjt:  INTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFG

Query:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA
        ++I  EI + + +  G L FP LIT +C  A
Subjt:  ELIRNEIRSCSKKMVGPLIFPGLITELCLQA

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220071.53e-4972.58Show/hide
Query:  VVRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILK
        +V+   + IN + G  +   V GNE++VHPSDEQVEEARRLICRP KTWT+STMGK+SLK LDINEQA VW YVVKNRLIPTS DSSIK NRAM+VYIL 
Subjt:  VVRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILK

Query:  KGTEFNFGELIRNEIRSCSKKMVG
        KG EFNFGELIRNEI+SCS+K+ G
Subjt:  KGTEFNFGELIRNEIRSCSKKMVG

A0A6J1E204 uncharacterized protein LOC1110257024.93e-2370Show/hide
Query:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA
        +W+YVVKN LI TS DSSI+  R M+VYIL KG EFNF ELIRNEI  C++KMVGPLIFP  I ELCL+A
Subjt:  VWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA

W9RBS1 Uncharacterized protein3.29e-1430.43Show/hide
Query:  VRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKK
        + F  + IN   G+ N  +    E++    +EQ++E  + I      W +S  G  +    ++   A VW + + +RL+ +++  +I  NRA+++Y +  
Subjt:  VRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKK

Query:  GTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA
        G   N G LI ++IR+C++K  G L FP LI+ELC+Q+
Subjt:  GTEFNFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAAAAAAAAAATGTGGTAAGATTTTTGCCTTCCATTATTAACACTCACTATGGTTTGTCAAATGTATTCAATGTCCTAGGAAATGAAGTTATGGTGCATCCTTCGGA
CGAGCAAGTGGAGGAGGCACGTCGACTTATTTGTAGACCACGCAAGACATGGACCGTCTCAACAATGGGAAAGATTTCCTTAAAGTCCCTTGACATCAATGAACAAGCAA
TGGTTTGGACGTATGTGGTGAAGAATAGGTTGATTCCCACTTCTAACGATTCCTCCATTAAGTGCAATAGGGCGATGATGGTGTACATCCTGAAGAAGGGCACTGAGTTC
AATTTTGGCGAACTCATAAGGAATGAAATTCGGAGTTGCTCGAAGAAAATGGTAGGTCCACTTATTTTTCCTGGATTAATAACTGAGTTATGCTTACAAGCA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAATGTGGTAAGATTTTTGCCTTCCATTATTAACACTCACTATGGTTTGTCAAATGTATTCAATGTCCTAGGAAATGAAGTTATGGTGCATCCTTCGGA
CGAGCAAGTGGAGGAGGCACGTCGACTTATTTGTAGACCACGCAAGACATGGACCGTCTCAACAATGGGAAAGATTTCCTTAAAGTCCCTTGACATCAATGAACAAGCAA
TGGTTTGGACGTATGTGGTGAAGAATAGGTTGATTCCCACTTCTAACGATTCCTCCATTAAGTGCAATAGGGCGATGATGGTGTACATCCTGAAGAAGGGCACTGAGTTC
AATTTTGGCGAACTCATAAGGAATGAAATTCGGAGTTGCTCGAAGAAAATGGTAGGTCCACTTATTTTTCCTGGATTAATAACTGAGTTATGCTTACAAGCA
Protein sequenceShow/hide protein sequence
KKKKNVVRFLPSIINTHYGLSNVFNVLGNEVMVHPSDEQVEEARRLICRPRKTWTVSTMGKISLKSLDINEQAMVWTYVVKNRLIPTSNDSSIKCNRAMMVYILKKGTEF
NFGELIRNEIRSCSKKMVGPLIFPGLITELCLQA