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MC11g1275 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1275
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiont-SNARE
Genome locationMC11:14667505..14668620
RNA-Seq ExpressionMC11g1275
SyntenyMC11g1275
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0048278 - vesicle docking (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030133.1 Syntaxin-43, partial [Cucurbita argyrosperma subsp. argyrosperma]4.88e-5586.96Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTL+FRKYRDALRSVR PT SSP SASP TSSG GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

XP_022156434.1 syntaxin-41-like [Momordica charantia]2.03e-5991.3Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTLLFRKYRDALRSVRAPTSSSP+SASP TSSG GGPVIELVSS LL+PNRTYAPLSTED GNSSKGAHTVGLPPAWVD+SEEIAANV RARAKM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
         EL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

XP_022999413.1 syntaxin-43-like [Cucurbita maxima]4.88e-5586.96Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTL+FRKYRDALRSVR PT SSP SASP TSSG GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

XP_023522691.1 syntaxin-41-like, partial [Cucurbita pepo subsp. pepo]1.61e-5686.96Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTL+FRKYRDALRSVR PT SSP SASP TSSG GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

XP_023545297.1 syntaxin-43-like [Cucurbita pepo subsp. pepo]4.88e-5586.96Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTL+FRKYRDALRSVR PT SSP SASP TSSG GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

TrEMBL top hitse value%identityAlignment
A0A0A0LLY7 t-SNARE coiled-coil homology domain-containing protein5.20e-5486.09Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTLLF+KYRDALRSVR PTSSSP  ASP TSS GGGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV  AR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

A0A1S3BWR8 syntaxin-437.36e-5486.09Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTLLF+KYRDALRSVR PTSSS  SASP TSS  GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

A0A6J1DTG3 syntaxin-41-like9.80e-6091.3Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTLLFRKYRDALRSVRAPTSSSP+SASP TSSG GGPVIELVSS LL+PNRTYAPLSTED GNSSKGAHTVGLPPAWVD+SEEIAANV RARAKM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
         EL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

A0A6J1G576 syntaxin-43-like2.36e-5586.96Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTL+FRKYRDALRSVR PT SSP SASP TSSG GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

A0A6J1KJM9 syntaxin-43-like2.36e-5586.96Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MASRNRTL+FRKYRDALRSVR PT SSP SASP TSSG GGPVIELVSS LL+PNR+YAPLSTED GNSSKGA TVGLPPAWVD+SEEIAANV RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
        MEL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

SwissProt top hitse value%identityAlignment
O65359 Syntaxin-411.1e-3773.91Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MA+RNRTLLFRKYR++LRSVRAP SSS ++    T SGG GPVIE+ S+ LLNPNR+YAP+STED G SSKGA TVGLPPAWVD+SEEI+ N+ RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
         EL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

Q9SUJ1 Syntaxin-436.5e-3366.67Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISA-----SPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLR
        MA+RNRTLLFRKYR++LRSVRAP  SS  S      S   +  G GPVIE+ S+ LLNPNR+YAP+STED GNSS+G  TVGLPP WVD+SEEI+  + R
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISA-----SPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLR

Query:  ARAKMMELDKAHAKALMPSF
        AR KM EL KAHAKALMPSF
Subjt:  ARAKMMELDKAHAKALMPSF

Q9SWH4 Syntaxin-421.8e-2254.31Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNR-TYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAK
        MA+RNRT ++RK+RDA +S RAP S S        S   GGPVIE+VS      N  +YAPL++ D G SS  A T+G+PPAWVD SEEI  N+ + R K
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNR-TYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAK

Query:  MMELDKAHAKALMPSF
        M EL KAH+KALMP+F
Subjt:  MMELDKAHAKALMPSF

Arabidopsis top hitse value%identityAlignment
AT3G05710.1 syntaxin of plants 431.8e-3364.71Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISA-----SPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTEDGNSSKGAHTVGLPPAWVDLSEEIAANVLRA
        MA+RNRTLLFRKYR++LRSVRAP  SS  S      S   +  G GPVIE+ S+ LLNPNR+YAP+STED  +S+G  TVGLPP WVD+SEEI+  + RA
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISA-----SPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTEDGNSSKGAHTVGLPPAWVDLSEEIAANVLRA

Query:  RAKMMELDKAHAKALMPSF
        R KM EL KAHAKALMPSF
Subjt:  RAKMMELDKAHAKALMPSF

AT3G05710.2 syntaxin of plants 434.6e-3466.67Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISA-----SPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLR
        MA+RNRTLLFRKYR++LRSVRAP  SS  S      S   +  G GPVIE+ S+ LLNPNR+YAP+STED GNSS+G  TVGLPP WVD+SEEI+  + R
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISA-----SPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLR

Query:  ARAKMMELDKAHAKALMPSF
        AR KM EL KAHAKALMPSF
Subjt:  ARAKMMELDKAHAKALMPSF

AT4G02195.1 syntaxin of plants 421.3e-2354.31Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNR-TYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAK
        MA+RNRT ++RK+RDA +S RAP S S        S   GGPVIE+VS      N  +YAPL++ D G SS  A T+G+PPAWVD SEEI  N+ + R K
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNR-TYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAK

Query:  MMELDKAHAKALMPSF
        M EL KAH+KALMP+F
Subjt:  MMELDKAHAKALMPSF

AT5G26980.1 syntaxin of plants 418.2e-3973.91Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MA+RNRTLLFRKYR++LRSVRAP SSS ++    T SGG GPVIE+ S+ LLNPNR+YAP+STED G SSKGA TVGLPPAWVD+SEEI+ N+ RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
         EL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF

AT5G26980.2 syntaxin of plants 418.2e-3973.91Show/hide
Query:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM
        MA+RNRTLLFRKYR++LRSVRAP SSS ++    T SGG GPVIE+ S+ LLNPNR+YAP+STED G SSKGA TVGLPPAWVD+SEEI+ N+ RAR KM
Subjt:  MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTED-GNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKM

Query:  MELDKAHAKALMPSF
         EL KAHAKALMPSF
Subjt:  MELDKAHAKALMPSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGAGGAATCGGACTTTGCTTTTTAGGAAATACAGGGACGCCTTGAGAAGTGTGAGGGCTCCTACCAGCTCTTCGCCAATTTCAGCATCGCCACCGACTAGTTC
TGGCGGTGGTGGTCCGGTGATTGAATTGGTGAGCTCGTTGTTGCTGAATCCGAATCGGACTTATGCTCCCTTGAGTACTGAGGATGGTAATTCAAGTAAGGGTGCTCATA
CCGTGGGTCTGCCTCCTGCTTGGGTCGATCTATCCGAAGAAATAGCTGCAAATGTGCTACGTGCACGAGCAAAGATGATGGAGTTAGATAAAGCTCATGCGAAGGCTTTA
ATGCCTTCATTT
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGAGGAATCGGACTTTGCTTTTTAGGAAATACAGGGACGCCTTGAGAAGTGTGAGGGCTCCTACCAGCTCTTCGCCAATTTCAGCATCGCCACCGACTAGTTC
TGGCGGTGGTGGTCCGGTGATTGAATTGGTGAGCTCGTTGTTGCTGAATCCGAATCGGACTTATGCTCCCTTGAGTACTGAGGATGGTAATTCAAGTAAGGGTGCTCATA
CCGTGGGTCTGCCTCCTGCTTGGGTCGATCTATCCGAAGAAATAGCTGCAAATGTGCTACGTGCACGAGCAAAGATGATGGAGTTAGATAAAGCTCATGCGAAGGCTTTA
ATGCCTTCATTT
Protein sequenceShow/hide protein sequence
MASRNRTLLFRKYRDALRSVRAPTSSSPISASPPTSSGGGGPVIELVSSLLLNPNRTYAPLSTEDGNSSKGAHTVGLPPAWVDLSEEIAANVLRARAKMMELDKAHAKAL
MPSF