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MC11g1276 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1276
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionAT-hook motif nuclear-localized protein
Genome locationMC11:14677106..14677321
RNA-Seq ExpressionMC11g1276
SyntenyMC11g1276
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003680 - AT DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR005175 - PPC domain
IPR014476 - AT-hook motif nuclear-localized protein 15-29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433664.1 hypothetical protein FNV43_RR24767 [Rhamnella rubrinervis]4.51e-2367.61Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NKSKPPIVITK SPNAL+SHVLEI++G+DI  SI   A RR  GVS+L+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

RDX60443.1 AT-hook motif nuclear-localized protein 20, partial [Mucuna pruriens]1.46e-2469.01Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK+KPPIVITK SPNAL+SHVLEI TGTD+A SI   A+RR  GVS+L+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

TXG49820.1 hypothetical protein EZV62_025695 [Acer yangbiense]3.61e-2370.42Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPIVITK SPN+L+SHVLEITTGTDI  SI   A RR  GVSIL+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

XP_007163438.1 hypothetical protein PHAVU_001G234600g [Phaseolus vulgaris]6.70e-2366.2Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPIVITK SPNAL+SHVLEI +G+D+A SI   A+RR  GVS+L+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

XP_027337540.1 AT-hook motif nuclear-localized protein 15-like [Abrus precatorius]1.76e-2366.2Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPIVITK SPNAL+SHVLEITTG+D+  SI   A+RR  GVS+L+G G +T++TLRQPAAP  +IT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

TrEMBL top hitse value%identityAlignment
A0A371E361 AT-hook motif nuclear-localized protein 20 (Fragment)7.06e-2569.01Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK+KPPIVITK SPNAL+SHVLEI TGTD+A SI   A+RR  GVS+L+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

A0A445HGX6 AT-hook motif nuclear-localized protein6.29e-2366.2Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPIVITK SPNAL+SHVLEIT+G+D+A SI   A+RR  GVS+L+G G + ++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

A0A5C7GYK7 PPC domain-containing protein1.75e-2370.42Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPIVITK SPN+L+SHVLEITTGTDI  SI   A RR  GVSIL+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

A0A7J7M9G6 AT-hook motif nuclear-localized protein3.77e-2363.38Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPI++T+ SPNAL+SHVLEI++GTDI+ SI   A RR+ GVSIL+G G +T++TLRQPAAP  V+T 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

V7CZ27 AT-hook motif nuclear-localized protein3.25e-2366.2Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF
        NK KPPIVITK SPNAL+SHVLEI +G+D+A SI   A+RR  GVS+L+G G +T++TLRQPAAP  VIT 
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITF

SwissProt top hitse value%identityAlignment
O22130 AT-hook motif nuclear-localized protein 226.6e-1553.12Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAA
        NK KPPI+IT+ S NAL+SHV+E+  G D+  S+ V A RR+ G+ +L+G GA+T++T+RQPA+
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAA

Q6DBQ1 AT-hook motif nuclear-localized protein 251.0e-1556.92Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP
        NK KPP +IT+ SPN L+SHVLE+T+G+DI+ ++   A RR  GV I++G GA+T++T+RQPAAP
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP

Q9C9K7 AT-hook motif nuclear-localized protein 291.9e-1453.97Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPA
        NK KPP+++T+ SPN L+SHVLE+++G DI  S+   A RR  GVSIL+G G + +++LRQPA
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPA

Q9M2S3 AT-hook motif nuclear-localized protein 158.3e-1858.33Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITFR
        NK K P+V+TK SPN+LQSHVLEI TG D+A S+   A RR  GVS+L+G G +T++TLRQPAA   V++ R
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITFR

Q9S7C9 AT-hook motif nuclear-localized protein 271.0e-1555.38Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP
        NK+KPPI++T+ SPNAL+SHVLE++ G DI  S+   A RR  GVS+L G G ++++TLRQP  P
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP

Arabidopsis top hitse value%identityAlignment
AT1G20900.1 Predicted AT-hook DNA-binding family protein7.2e-1755.38Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP
        NK+KPPI++T+ SPNAL+SHVLE++ G DI  S+   A RR  GVS+L G G ++++TLRQP  P
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP

AT1G76500.1 Predicted AT-hook DNA-binding family protein1.4e-1553.97Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPA
        NK KPP+++T+ SPN L+SHVLE+++G DI  S+   A RR  GVSIL+G G + +++LRQPA
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPA

AT2G45430.1 AT-hook motif nuclear-localized protein 224.7e-1653.12Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAA
        NK KPPI+IT+ S NAL+SHV+E+  G D+  S+ V A RR+ G+ +L+G GA+T++T+RQPA+
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAA

AT3G55560.1 AT-hook protein of GA feedback 25.9e-1958.33Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITFR
        NK K P+V+TK SPN+LQSHVLEI TG D+A S+   A RR  GVS+L+G G +T++TLRQPAA   V++ R
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITFR

AT4G35390.1 AT-hook protein of GA feedback 17.2e-1756.92Show/hide
Query:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP
        NK KPP +IT+ SPN L+SHVLE+T+G+DI+ ++   A RR  GV I++G GA+T++T+RQPAAP
Subjt:  NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACAAGTCCAAGCCACCCATTGTGATCACCAAACACAGCCCCAACGCCCTCCAAAGCCACGTCCTCGAGATCACTACTGGCACCGACATAGCCCGTTCCATCTTCGTCTT
GGCCCACCGCCGCCGCCCCGGAGTCTCCATCCTCAACGGTAGAGGCGCCATCACTGACATCACCCTCCGGCAGCCGGCCGCACCCAATAGGGTTATAACCTTTCGC
mRNA sequenceShow/hide mRNA sequence
AACAAGTCCAAGCCACCCATTGTGATCACCAAACACAGCCCCAACGCCCTCCAAAGCCACGTCCTCGAGATCACTACTGGCACCGACATAGCCCGTTCCATCTTCGTCTT
GGCCCACCGCCGCCGCCCCGGAGTCTCCATCCTCAACGGTAGAGGCGCCATCACTGACATCACCCTCCGGCAGCCGGCCGCACCCAATAGGGTTATAACCTTTCGC
Protein sequenceShow/hide protein sequence
NKSKPPIVITKHSPNALQSHVLEITTGTDIARSIFVLAHRRRPGVSILNGRGAITDITLRQPAAPNRVITFR