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MC11g1282 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1282
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC11:14980061..14980330
RNA-Seq ExpressionMC11g1282
SyntenyMC11g1282
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8673674.1 AP-2 complex subunit alpha-2 [Hibiscus syriacus]2.58e-0839.02Show/hide
Query:  ICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS
        +CK + E+ QHLFF SC+ A + W  +L  +G  T LPNDP +LL+ +   N K  +W   +   LW+ W  RN  +F + S
Subjt:  ICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS

KAE8687812.1 Beta-adaptin-like protein A [Hibiscus syriacus]6.59e-0838.1Show/hide
Query:  CIICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS
        C +CK + E+ QHLFF SC+ A + W  +L  +   T LPNDP++LL+ +   N K  +W       LW+ W  RN  +F + S
Subjt:  CIICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS

OUZ99263.1 Reverse transcriptase zinc-binding domain [Macleaya cordata]5.33e-0732.18Show/hide
Query:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKN---IKEQLWTNFIRAFLWTTWGERNQRIFLDKSQ
        C +C   +ES       CT++ E W +I+  FGW    P+        +P K    I + +W     A  WT W ERN+R+F +KS+
Subjt:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKN---IKEQLWTNFIRAFLWTTWGERNQRIFLDKSQ

XP_010241067.1 PREDICTED: uncharacterized protein LOC104585780 [Nelumbo nucifera]2.28e-0631.87Show/hide
Query:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQ---LWTNFIRAFLWTTWGERNQRIFLDKSQSFDH
        C++C  + ES       C F+ + W   L A G +  LP   K  L  + LK + ++   +W     A LW+ W ERN RIF  + +  DH
Subjt:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQ---LWTNFIRAFLWTTWGERNQRIFLDKSQSFDH

XP_039034276.1 AP-2 complex subunit alpha-2-like [Hibiscus syriacus]2.57e-0839.02Show/hide
Query:  ICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS
        +CK + E+ QHLFF SC+ A + W  +L  +G  T LPNDP +LL+ +   N K  +W   +   LW+ W  RN  +F + S
Subjt:  ICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS

TrEMBL top hitse value%identityAlignment
A0A200PM22 Reverse transcriptase zinc-binding domain2.58e-0732.18Show/hide
Query:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKN---IKEQLWTNFIRAFLWTTWGERNQRIFLDKSQ
        C +C   +ES       CT++ E W +I+  FGW    P+        +P K    I + +W     A  WT W ERN+R+F +KS+
Subjt:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKN---IKEQLWTNFIRAFLWTTWGERNQRIFLDKSQ

A0A2N9FER0 zf-RVT domain-containing protein9.04e-0734.09Show/hide
Query:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYP--LKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKSQSF
        C +C+ + E+       CTFAS+ W  +L +FG     P     LL G+     N K  +W       +WT W ERN+R F D+ Q F
Subjt:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYP--LKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKSQSF

A0A5B6Z3J7 zf-RVT domain-containing protein (Fragment)9.12e-0735.37Show/hide
Query:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIK---EQLWTNFIRAFLWTTWGERNQRIF
        C +CKKSMES    F  C  A E W       G S  +P   K LL+G+    ++   ++LW       +W+ W ERN+R F
Subjt:  CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIK---EQLWTNFIRAFLWTTWGERNQRIF

A0A6A2YGY9 AP-2 complex subunit alpha-21.25e-0839.02Show/hide
Query:  ICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS
        +CK + E+ QHLFF SC+ A + W  +L  +G  T LPNDP +LL+ +   N K  +W   +   LW+ W  RN  +F + S
Subjt:  ICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS

A0A6A2Z9R5 Beta-adaptin-like protein A3.19e-0838.1Show/hide
Query:  CIICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS
        C +CK + E+ QHLFF SC+ A + W  +L  +   T LPNDP++LL+ +   N K  +W       LW+ W  RN  +F + S
Subjt:  CIICKKSMES-QHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTATTATTTGCAAGAAGAGCATGGAATCTCAACATCTCTTCTTCACTTCGTGTACTTTTGCATCTGAATTTTGGAAGGACATCCTCTTTGCTTTTGGTTGGTCCACAAC
GTTACCAAATGACCCTAAACTTCTCCTAACGGGATATCCCTTAAAAAACATAAAGGAACAGTTATGGACAAATTTCATTCGAGCATTTCTGTGGACTACTTGGGGTGAAA
GAAATCAAAGGATCTTCCTTGACAAGTCACAATCTTTTGATCACTTTTTT
mRNA sequenceShow/hide mRNA sequence
TGTATTATTTGCAAGAAGAGCATGGAATCTCAACATCTCTTCTTCACTTCGTGTACTTTTGCATCTGAATTTTGGAAGGACATCCTCTTTGCTTTTGGTTGGTCCACAAC
GTTACCAAATGACCCTAAACTTCTCCTAACGGGATATCCCTTAAAAAACATAAAGGAACAGTTATGGACAAATTTCATTCGAGCATTTCTGTGGACTACTTGGGGTGAAA
GAAATCAAAGGATCTTCCTTGACAAGTCACAATCTTTTGATCACTTTTTT
Protein sequenceShow/hide protein sequence
CIICKKSMESQHLFFTSCTFASEFWKDILFAFGWSTTLPNDPKLLLTGYPLKNIKEQLWTNFIRAFLWTTWGERNQRIFLDKSQSFDHFF