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MC11g1302 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1302
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionExonuclease domain-containing protein
Genome locationMC11:15643480..15643724
RNA-Seq ExpressionMC11g1302
SyntenyMC11g1302
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135360.1 protein NEN1-like [Momordica charantia]6.03e-3681.48Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD V+S  NFA+I+DRVYDILH RIWAGHNILRFDCARIRE+ AEIGMPAPEPK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

XP_022921575.1 protein NEN1-like [Cucurbita moschata]2.63e-3581.48Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIGMPAP+PK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

XP_022987423.1 protein NEN1-like [Cucurbita maxima]2.63e-3581.48Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIGMPAP+PK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

XP_023515369.1 protein NEN1-like isoform X1 [Cucurbita pepo subsp. pepo]1.13e-3582.72Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIGMPAPEPK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

XP_023515370.1 protein NEN1-like isoform X2 [Cucurbita pepo subsp. pepo]9.78e-3682.72Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIGMPAPEPK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

TrEMBL top hitse value%identityAlignment
A0A0A0LSC3 Exonuclease domain-containing protein5.52e-3580.25Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIG+PAPEPK TIDSL LLT++FGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

A0A5A7UTA8 Protein NEN15.52e-3580.25Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA A+IG+PAPEPK TIDSL LLT++FGRR GDMKV
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

A0A6J1C0W8 protein NEN1-like2.92e-3681.48Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD V+S  NFA+I+DRVYDILH RIWAGHNILRFDCARIRE+ AEIGMPAPEPK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

A0A6J1E665 protein NEN1-like1.27e-3581.48Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIGMPAP+PK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

A0A6J1JJE4 protein NEN1-like1.27e-3581.48Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN ITRD VIS   FA+I+DRVYDILH RIWAGHNILRFDCARIREA AEIGMPAP+PK TIDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

SwissProt top hitse value%identityAlignment
F4JJ23 Protein NEN43.2e-1855.13Show/hide
Query:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        ITR  V +  +F +++++++ +L+ RIWAGHNI RFDC RI+EA AEIG  APEP   IDSL LL+ KFG+R G+MK+
Subjt:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

Q0V842 Protein NEN22.1e-2570.37Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN I R+ V S   FA+I+D VYDILH RIWAGHNIL+FDC RIREA AEIG   PEPK TIDSL LLT++FGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

Q9CA74 Protein NEN33.2e-2671.79Show/hide
Query:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        ITRD V+S   F+EI+D+VYDILH RIWAGHNI+RFDC RIREA AEIG+  PEPK TIDSL LL++KFG+R GDMK+
Subjt:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

Q9FLR0 Protein NEN13.2e-2672.84Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN I RD V+    FA+I+D VYDILH RIWAGHNILRFDCARIREA AEIG   PEPK  IDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

Arabidopsis top hitse value%identityAlignment
AT1G74390.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-2771.79Show/hide
Query:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        ITRD V+S   F+EI+D+VYDILH RIWAGHNI+RFDC RIREA AEIG+  PEPK TIDSL LL++KFG+R GDMK+
Subjt:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

AT1G74390.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-2771.79Show/hide
Query:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        ITRD V+S   F+EI+D+VYDILH RIWAGHNI+RFDC RIREA AEIG+  PEPK TIDSL LL++KFG+R GDMK+
Subjt:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

AT4G39810.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-1955.13Show/hide
Query:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        ITR  V +  +F +++++++ +L+ RIWAGHNI RFDC RI+EA AEIG  APEP   IDSL LL+ KFG+R G+MK+
Subjt:  ITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

AT5G07710.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-2772.84Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN I RD V+    FA+I+D VYDILH RIWAGHNILRFDCARIREA AEIG   PEPK  IDSL LLT+KFGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV

AT5G61390.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-2670.37Show/hide
Query:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV
        CN I R+ V S   FA+I+D VYDILH RIWAGHNIL+FDC RIREA AEIG   PEPK TIDSL LLT++FGRR GDMK+
Subjt:  CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSL-LLTKKFGRRVGDMKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGCAATGACATCACTAGAGATGTTGTCATTTCTATAGCCAATTTCGCTGAAATTTCTGATAGGGTTTACGATATCCTTCACAGACGGATATGGGCAGGCCATAACATACT
GAGATTTGATTGTGCACGAATAAGGGAGGCTTTGGCAGAAATTGGTATGCCAGCACCAGAGCCGAAATGTACTATTGATTCATTATTGTTGACTAAAAAGTTTGGTAGGA
GAGTTGGCGACATGAAGGTA
mRNA sequenceShow/hide mRNA sequence
TGCAATGACATCACTAGAGATGTTGTCATTTCTATAGCCAATTTCGCTGAAATTTCTGATAGGGTTTACGATATCCTTCACAGACGGATATGGGCAGGCCATAACATACT
GAGATTTGATTGTGCACGAATAAGGGAGGCTTTGGCAGAAATTGGTATGCCAGCACCAGAGCCGAAATGTACTATTGATTCATTATTGTTGACTAAAAAGTTTGGTAGGA
GAGTTGGCGACATGAAGGTA
Protein sequenceShow/hide protein sequence
CNDITRDVVISIANFAEISDRVYDILHRRIWAGHNILRFDCARIREALAEIGMPAPEPKCTIDSLLLTKKFGRRVGDMKV