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MC11g1307 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1307
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S16-like
Genome locationMC11:15755526..15755642
RNA-Seq ExpressionMC11g1307
SyntenyMC11g1307
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000307 - Ribosomal protein S16
IPR023803 - Ribosomal protein S16 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF28258.1 mitochondrial ribosomal protein S16, putative [Ricinus communis]3.37e-1884.62Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKN+PFY VM ANS+SP+DGKHL+VLGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

MBA0812271.1 hypothetical protein [Gossypium harknessii]3.98e-1886.84Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLP
        LSRFGCKNKPFY VM ANS+SP+DGKHL+VLGYYNPLP
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLP

PPR83850.1 hypothetical protein GOBAR_AA36858 [Gossypium barbadense]6.99e-1987.18Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKNKPFY VM ANS+SP+DGKHL+VLGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

QID92315.1 ribosomal protein S16 [Delphinium maackianum]4.86e-1887.18Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKNKPFY VM ANS+SP+DGKHL+VLGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

XP_022754871.1 30S ribosomal protein S16-2, chloroplastic/mitochondrial [Durio zibethinus]4.82e-1884.62Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKNKPFY VM ANS+SP+DGKHL++LGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

TrEMBL top hitse value%identityAlignment
A0A2P5VYD4 Uncharacterized protein3.38e-1987.18Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKNKPFY VM ANS+SP+DGKHL+VLGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

A0A6G6CIF1 Ribosomal protein S162.36e-1887.18Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKNKPFY VM ANS+SP+DGKHL+VLGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

A0A6P5ZR43 30S ribosomal protein S16-2, chloroplastic/mitochondrial2.34e-1884.62Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKNKPFY VM ANS+SP+DGKHL++LGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

A0A7J9HQY4 Uncharacterized protein (Fragment)1.93e-1886.84Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLP
        LSRFGCKNKPFY VM ANS+SP+DGKHL+VLGYYNPLP
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLP

B9T7A2 Mitochondrial ribosomal protein S16, putative1.63e-1884.62Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKN+PFY VM ANS+SP+DGKHL+VLGYYNPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

SwissProt top hitse value%identityAlignment
A4XLF4 30S ribosomal protein S168.0e-0756.76Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPL
        L R G KN PFY ++ A+S+SP+DGK +  +GYYNPL
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPL

B2TJ28 30S ribosomal protein S161.0e-0651.35Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPL
        L R GCK  PFY ++ A+S+SP+DG+ ++ +GYYNP+
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPL

B2V4E2 30S ribosomal protein S161.0e-0651.35Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPL
        L R GCK  PFY ++ A+S+SP+DG+ ++ +GYYNP+
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPL

O65686 30S ribosomal protein S16-1, chloroplastic3.6e-0753.85Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        L+R GCK++PFY V+ A+ +S +DGK ++VLG+Y+PL G
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

Q9LTS6 30S ribosomal protein S16-2, chloroplastic/mitochondrial4.4e-1376.92Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKN+PF+ VM A+S+SP+DGKHL+VLGY+NPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

Arabidopsis top hitse value%identityAlignment
AT4G34620.1 small subunit ribosomal protein 162.5e-0853.85Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        L+R GCK++PFY V+ A+ +S +DGK ++VLG+Y+PL G
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG

AT5G56940.1 Ribosomal protein S16 family protein3.1e-1476.92Show/hide
Query:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG
        LSRFGCKN+PF+ VM A+S+SP+DGKHL+VLGY+NPLPG
Subjt:  LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTCGAGGTTTGGCTGCAAGAACAAACCATTTTACTGGGTAATGCCTGCCAATAGCCAATCTCCCAAAGACGGCAAGCATCTCAAGGTTCTAGGCTACTATAATCCACT
GCCAGGG
mRNA sequenceShow/hide mRNA sequence
TTGTCGAGGTTTGGCTGCAAGAACAAACCATTTTACTGGGTAATGCCTGCCAATAGCCAATCTCCCAAAGACGGCAAGCATCTCAAGGTTCTAGGCTACTATAATCCACT
GCCAGGG
Protein sequenceShow/hide protein sequence
LSRFGCKNKPFYWVMPANSQSPKDGKHLKVLGYYNPLPG