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MC11g1396 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1396
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationMC11:18410683..18411271
RNA-Seq ExpressionMC11g1396
SyntenyMC11g1396
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3955750.1 hypothetical protein CMV_019074 [Castanea mollissima]2.93e-1966.67Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+L+V+MY+LLPMPLLFFAG ++SS +  +   +VNATKFLT  S VGSIAIPAILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

XP_012084363.1 vacuolar protein sorting-associated protein 55 homolog isoform X2 [Jatropha curcas]1.73e-1969.84Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFFAG ++SS I  +   +VNATKFLT  S VGSIAIP ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

XP_021599879.1 vacuolar protein sorting-associated protein 55 homolog [Manihot esculenta]1.69e-1969.84Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFFAG ++SS    +   +VNATKFLT  S VGSIAIPAILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

XP_022157395.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]6.59e-2176.19Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WPLLSVIMYILLPMPLLFFAG +TSS    +   +VNATKFLT  STVGSIAIP ILKHA+II
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

XP_022772447.1 vacuolar protein sorting-associated protein 55 homolog [Durio zibethinus]2.11e-2070.49Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHAD
        WP+L+VIMY+LLPMPLLFFAGFN SS +  +   +V ATK+LT  STVGSIAIPAILKHA+
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHAD

TrEMBL top hitse value%identityAlignment
A0A2C9U468 Uncharacterized protein8.18e-2069.84Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFFAG ++SS    +   +VNATKFLT  S VGSIAIPAILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

A0A6J1DSZ0 vacuolar protein sorting-associated protein 55 homolog3.19e-2176.19Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WPLLSVIMYILLPMPLLFFAG +TSS    +   +VNATKFLT  STVGSIAIP ILKHA+II
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

A0A6M2F9G2 Uncharacterized protein1.19e-1968.25Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFFAG N+SS +  +   +VNATKFLT  S +GSIAIP ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

A0A6P6B5J2 vacuolar protein sorting-associated protein 55 homolog1.02e-2070.49Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHAD
        WP+L+VIMY+LLPMPLLFFAGFN SS +  +   +V ATK+LT  STVGSIAIPAILKHA+
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHAD

D7TTG4 Uncharacterized protein1.64e-1968.25Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+L+VIMY+LLPMPLLFFAG +TSS    +   +V+ATKFLT  S VGSIAIPAILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

SwissProt top hitse value%identityAlignment
Q9AST6 Vacuolar protein sorting-associated protein 55 homolog3.8e-1460.32Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFF G +++S    +   ++NA KFLT  S VGS+AIP+ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein2.7e-1560.32Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFF G +++S    +   ++NA KFLT  S VGS+AIP+ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein2.7e-1560.32Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFF G +++S    +   ++NA KFLT  S VGS+AIP+ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein2.7e-1560.32Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFF G +++S    +   ++NA KFLT  S VGS+AIP+ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein2.7e-1560.32Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFF G +++S    +   ++NA KFLT  S VGS+AIP+ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein2.7e-1560.32Show/hide
Query:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII
        WP+LSVIMY+LLPMPLLFF G +++S    +   ++NA KFLT  S VGS+AIP+ILKHA +I
Subjt:  WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADII


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCCATTGCTGAGTGTGATTATGTACATTCTTCTCCCAATGCCTTTGCTGTTTTTTGCTGGTTTCAATACTTCCTCCGCCATCTTCCGAAACTGGAGACAGTTT
GTGAATGCGACTAAATTTTTAACTAGGACTTCAACGGTTGGAAGCATTGCAATACCTGCAATTTTGAAGCATGCTGATATTATCGAC
mRNA sequenceShow/hide mRNA sequence
TGGCCATTGCTGAGTGTGATTATGTACATTCTTCTCCCAATGCCTTTGCTGTTTTTTGCTGGTTTCAATACTTCCTCCGCCATCTTCCGAAACTGGAGACAGTTT
GTGAATGCGACTAAATTTTTAACTAGGACTTCAACGGTTGGAAGCATTGCAATACCTGCAATTTTGAAGCATGCTGATATTATCGAC
Protein sequenceShow/hide protein sequence
WPLLSVIMYILLPMPLLFFAGFNTSSAIFRNWRQFVNATKFLTRTSTVGSIAIPAILKHADIID