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MC11g1401 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1401
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box domain-containing protein
Genome locationMC11:18504852..18505104
RNA-Seq ExpressionMC11g1401
SyntenyMC11g1401
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52679.1 hypothetical protein Csa_008030 [Cucumis sativus]8.63e-1747.87Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        N +RISL+PD+L+H I+S LNT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  N  KL+++SS
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]2.30e-1647.83Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PDSL+H I+S  NT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  + +KL+++SS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]1.82e-1647.83Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PDSL+H I+S  NT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  + +KL+++SS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]3.10e-1647.25Show/hide
Query:  DRISLVPDSLI-HCIMSLNTQQAVQTCVLLKRWETVWTCMHTINF--------DGSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PD L+ H + ++NT+Q VQTCVL KRW+T+WT + T+NF        + S    R K+ SFKN  F +LS  C    +KLS++SS
Subjt:  DRISLVPDSLI-HCIMSLNTQQAVQTCVLLKRWETVWTCMHTINF--------DGSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]8.42e-1749.46Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRV----------KELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PD L+H I+S LNT+  VQTCVL KRW+T+WT + T+NFD ++  S +          KE SFK   F VLS HC  N  KL++++S
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRV----------KELSFKNLFFGVLSHHCGGNFEKLSFSSS

TrEMBL top hitse value%identityAlignment
A0A0A0KUU7 F-box domain-containing protein4.18e-1747.87Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        N +RISL+PD+L+H I+S LNT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  N  KL+++SS
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.11e-1647.83Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PDSL+H I+S  NT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  + +KL+++SS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X28.80e-1747.83Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PDSL+H I+S  NT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  + +KL+++SS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

A0A5A7TCF1 F-box/LRR-repeat protein2.25e-1646.74Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PD+L+H I+S  NT+  VQTC+L KRW+T+WT + T+NFD ++  S           K  SFK   F VLS HC  + +KL+++SS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQS---------RVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.50e-1647.25Show/hide
Query:  DRISLVPDSLI-HCIMSLNTQQAVQTCVLLKRWETVWTCMHTINF--------DGSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLSFSSS
        DRISL+PD L+ H + ++NT+Q VQTCVL KRW+T+WT + T+NF        + S    R K+ SFKN  F +LS  C    +KLS++SS
Subjt:  DRISLVPDSLI-HCIMSLNTQQAVQTCVLLKRWETVWTCMHTINF--------DGSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLSFSSS

SwissProt top hitse value%identityAlignment
P0C2G0 F-box/LRR-repeat protein At1g066306.1e-0436.47Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD------GSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLS
        D I+ +PD ++  I+S L T+QAV T VL K+W T++  + T+ FD      G    S V   SFK+L    ++  C     KLS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD------GSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLS

Q3EA38 Putative F-box/FBD/LRR-repeat protein At4g139651.9e-0542.25Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRVKELSFKNLFFGVLSH
        N DRIS +P++LI  I+S L T+ AV T VL K+W+ +W  +  +NFD    +   K  S KN+   +LSH
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRVKELSFKNLFFGVLSH

Q6NKX3 F-box/FBD/LRR-repeat protein At2g042302.1e-0444Show/hide
Query:  NVDRISLVPDS-LIHCIMSLNTQQAVQTCVLLKRWETVWTCMHTINFDGS
        N DRIS +PD+ L+  + SL T+ A+ T VL KRW ++WT +  + FD +
Subjt:  NVDRISLVPDS-LIHCIMSLNTQQAVQTCVLLKRWETVWTCMHTINFDGS

Q9SAG4 F-box protein At1g809603.6e-0447.92Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD
        NVD IS +PD ++  I+S L+T++A++T V+ KRWE VW  M  + FD
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD

Q9SJ32 Putative F-box/FBD/LRR-repeat protein At2g053002.1e-0442.19Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRVKELSFKNLFF
        DRIS +PD L+  I++ L T++AV+T VL  RW T+W  +  +    S        LSF NLFF
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRVKELSFKNLFF

Arabidopsis top hitse value%identityAlignment
AT1G06630.1 F-box/RNI-like superfamily protein4.3e-0536.47Show/hide
Query:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD------GSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLS
        D I+ +PD ++  I+S L T+QAV T VL K+W T++  + T+ FD      G    S V   SFK+L    ++  C     KLS
Subjt:  DRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD------GSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLS

AT1G80960.1 F-box and Leucine Rich Repeat domains containing protein2.5e-0547.92Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD
        NVD IS +PD ++  I+S L+T++A++T V+ KRWE VW  M  + FD
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD

AT1G80960.2 F-box and Leucine Rich Repeat domains containing protein2.5e-0547.92Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD
        NVD IS +PD ++  I+S L+T++A++T V+ KRWE VW  M  + FD
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD

AT1G80960.3 F-box and Leucine Rich Repeat domains containing protein2.5e-0547.92Show/hide
Query:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD
        NVD IS +PD ++  I+S L+T++A++T V+ KRWE VW  M  + FD
Subjt:  NVDRISLVPDSLIHCIMS-LNTQQAVQTCVLLKRWETVWTCMHTINFD

AT2G04230.1 FBD, F-box and Leucine Rich Repeat domains containing protein1.5e-0544Show/hide
Query:  NVDRISLVPDS-LIHCIMSLNTQQAVQTCVLLKRWETVWTCMHTINFDGS
        N DRIS +PD+ L+  + SL T+ A+ T VL KRW ++WT +  + FD +
Subjt:  NVDRISLVPDS-LIHCIMSLNTQQAVQTCVLLKRWETVWTCMHTINFDGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGTGGACAGAATCAGCCTTGTACCAGATTCTCTTATTCATTGCATTATGTCCTTAAACACACAACAGGCTGTCCAAACGTGTGTTCTATTAAAAAGATGGGAAACCGT
CTGGACTTGTATGCACACTATCAACTTTGATGGGTCAACTCTGCAATCTCGTGTGAAAGAATTATCGTTTAAGAACTTATTTTTTGGAGTTCTATCTCATCATTGTGGTG
GAAATTTTGAAAAATTGAGTTTCTCTTCCTCA
mRNA sequenceShow/hide mRNA sequence
AATGTGGACAGAATCAGCCTTGTACCAGATTCTCTTATTCATTGCATTATGTCCTTAAACACACAACAGGCTGTCCAAACGTGTGTTCTATTAAAAAGATGGGAAACCGT
CTGGACTTGTATGCACACTATCAACTTTGATGGGTCAACTCTGCAATCTCGTGTGAAAGAATTATCGTTTAAGAACTTATTTTTTGGAGTTCTATCTCATCATTGTGGTG
GAAATTTTGAAAAATTGAGTTTCTCTTCCTCA
Protein sequenceShow/hide protein sequence
NVDRISLVPDSLIHCIMSLNTQQAVQTCVLLKRWETVWTCMHTINFDGSTLQSRVKELSFKNLFFGVLSHHCGGNFEKLSFSSS