CuGenDBv2

Gene ID	MC11g1402
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	30S ribosomal protein S11, chloroplastic
Genome location	MC11:18514731..18514943
RNA-Seq Expression	MC11g1402
Synteny	MC11g1402
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0019843 - rRNA binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

AMQ10368.1 ribosomal protein S11 [Sonchus maritimus]

1.49e-34

87.32

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRSDILL+F+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

QTA71780.1 ribosomal protein S11 [Coriaria nepalensis]

1.49e-34

88.73

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR+VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSFI DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

YP_009346516.1 ribosomal protein S11 [Cucumis x hytivus]

1.05e-34

90.14

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIRVVVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSFI DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

YP_009646961.1 30S ribosomal protein S11 [Cephalotus follicularis]

1.49e-34

87.32

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRSDILL+F+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

YP_010038746.1 chloroplast 30S ribosomal protein S11 [Sonchus arvensis]

1.40e-34

87.32

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRSDILL+F+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

TrEMBL top hits

e value

%identity

Alignment

A0A1P8C7T4 30S ribosomal protein S11, chloroplastic

5.08e-35

90.14

Show/hide

Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIRVVVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSFI DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

A0A1U8YIE9 30S ribosomal protein S11, chloroplastic

7.21e-35

87.32

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRSDILL+F+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

A0A4Y5QKC2 30S ribosomal protein S11

7.21e-35

87.32

Show/hide

Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRSDILL+F+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

A0A4Y5RD43 30S ribosomal protein S11, chloroplastic

5.08e-35

90.14

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIRVVVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSFI DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

A0A5D2IB07 Uncharacterized protein (Fragment)

1.04e-34

87.32

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSF+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

SwissProt top hits

e value

%identity

Alignment

A0ZZ68 30S ribosomal protein S11, chloroplastic

8.8e-28

87.32

Show/hide

Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSF+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

B1A968 30S ribosomal protein S11, chloroplastic

8.8e-28

87.32

Show/hide

Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSF+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

Q06GW4 30S ribosomal protein S11, chloroplastic

8.8e-28

87.32

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSF+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

Q09WY4 30S ribosomal protein S11, chloroplastic

6.7e-28

88.73

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Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSFI DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

Q49KW5 30S ribosomal protein S11, chloroplastic

8.8e-28

87.32

Show/hide

Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEVMIKGPGLGRDA LRAIRRS ILLSF+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00750.1 ribosomal protein S11

3.1e-28

85.92

Show/hide

Query:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV
        T FA QTAAGNAIR VVDQGMQ AEV IKGPGLGRDA LRAIRRS ILLSF+ DVTPMPHNG RPPKKRRV
Subjt:  TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

Sequences

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CDS sequence

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ACACTATTTGCCGATCAAACCGCAGCAGGAAATGCTATTCGGGTAGTAGTGGATCAGGGTATGCAACTAGCGGAAGTCATGATAAAGGGCCCAGGTCTCGGAAGAGATGC
AACATTAAGAGCTATTCGTAGAAGCGATATACTCTTAAGTTTCATACTGGATGTAACCCCTATGCCACATAATGGCTATAGGCCCCCTAAAAAACGACGTGTG

mRNA sequence

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Protein sequence

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TLFADQTAAGNAIRVVVDQGMQLAEVMIKGPGLGRDATLRAIRRSDILLSFILDVTPMPHNGYRPPKKRRV

MC11g1402 (gene) of Bitter gourd (Dali-11) v1 genome