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MC11g1405 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1405
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box domain-containing protein
Genome locationMC11:18524930..18525067
RNA-Seq ExpressionMC11g1405
SyntenyMC11g1405
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649006.1 hypothetical protein Csa_008454 [Cucumis sativus]6.81e-1884.78Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PD LLH ILSFLNTK VVQ CVLSKRWKTLW +IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

XP_004141639.1 F-box/LRR-repeat protein At3g26922 [Cucumis sativus]6.71e-1884.78Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PD LLH ILSFLNTK VVQ CVLSKRWKTLW +IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]2.66e-1580.43Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PDSLLH ILS  NTK VVQ C+LSKRWKTLW  IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

XP_022141765.1 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [Momordica charantia]2.39e-1986.96Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PDSLLH ILS LNT+QVVQ CVLSKRWKTLW DIPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]8.59e-1682.61Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PD LLH ILS LNTK VVQ CVLSKRWKTLW  IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

TrEMBL top hitse value%identityAlignment
A0A0A0KSW6 F-box domain-containing protein5.31e-1884.78Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PD LLH ILSFLNTK VVQ CVLSKRWKTLW +IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.55e-1580.43Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PDSLLH ILS  NTK VVQ C+LSKRWKTLW  IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X21.29e-1580.43Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PDSLLH ILS  NTK VVQ C+LSKRWKTLW  IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568201.16e-1986.96Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PDSLLH ILS LNT+QVVQ CVLSKRWKTLW DIPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

A0A6J1CJ42 F-box/FBD/LRR-repeat protein At1g16930-like1.72e-1576.09Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRISL+PDSLLH ILS LNTK  VQ CVLSKRW+++W  IPTLNFD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

SwissProt top hitse value%identityAlignment
Q1PFK0 F-box/LRR-repeat protein At1g556603.2e-0750Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        D+IS +PD LL  +LSFL+TK  V   +LS RWK+LW+ +P L ++
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

Q56YH2 FBD-associated F-box protein At5g187801.5e-0754.35Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS++P+ LL  ILSFL TK  V+  VLS RW+ LW+ +P L+ D
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

Q8LF09 F-box/FBD/LRR-repeat protein At4g001602.5e-0758.7Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS +PD+LL  ILSFL TK VV   V SK+W+ LW  +P L FD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

Q9FJT1 Putative FBD-associated F-box protein At5g568203.2e-0752.17Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS +PD LL  ILSF++T   +   +LSKRWK +W  +PTL+ D
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

Q9FZ52 F-box/FBD/LRR-repeat protein At1g169305.0e-0858.7Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS +PDSLL  ILS L+TK+ V   VLSKRW+ LW+ +P L+ D
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

Arabidopsis top hitse value%identityAlignment
AT1G16930.1 F-box/RNI-like/FBD-like domains-containing protein3.6e-0958.7Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS +PDSLL  ILS L+TK+ V   VLSKRW+ LW+ +P L+ D
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

AT1G55660.1 FBD, F-box and Leucine Rich Repeat domains containing protein2.3e-0850Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        D+IS +PD LL  +LSFL+TK  V   +LS RWK+LW+ +P L ++
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

AT4G00160.1 F-box/RNI-like/FBD-like domains-containing protein1.8e-0858.7Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS +PD+LL  ILSFL TK VV   V SK+W+ LW  +P L FD
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

AT5G18780.1 F-box/RNI-like superfamily protein1.0e-0854.35Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS++P+ LL  ILSFL TK  V+  VLS RW+ LW+ +P L+ D
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD

AT5G18780.2 F-box/RNI-like superfamily protein1.0e-0854.35Show/hide
Query:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD
        DRIS++P+ LL  ILSFL TK  V+  VLS RW+ LW+ +P L+ D
Subjt:  DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACAGAATCAGCCTTGTACCAGATTCCCTTCTTCACGGCATTCTCTCATTCTTGAACACAAAACAGGTTGTGCAAAATTGTGTTCTTTCAAAACGGTGGAAAACTCTTTG
GATTGATATACCCACTCTCAACTTTGAT
mRNA sequenceShow/hide mRNA sequence
GACAGAATCAGCCTTGTACCAGATTCCCTTCTTCACGGCATTCTCTCATTCTTGAACACAAAACAGGTTGTGCAAAATTGTGTTCTTTCAAAACGGTGGAAAACTCTTTG
GATTGATATACCCACTCTCAACTTTGAT
Protein sequenceShow/hide protein sequence
DRISLVPDSLLHGILSFLNTKQVVQNCVLSKRWKTLWIDIPTLNFD