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MC11g1406 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1406
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box family protein
Genome locationMC11:18534810..18535067
RNA-Seq ExpressionMC11g1406
SyntenyMC11g1406
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]5.82e-2460.23Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTR-NNPKSKEKSFKRFIFKVMSEHRGY-IQKLS
        DRISLLPD+LLHHILSS NTK  VQTC+LSKRW+++W  IPTLNFD++S+    S   ++ +SK +SFK FIF+V+S+H    IQKL+
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTR-NNPKSKEKSFKRFIFKVMSEHRGY-IQKLS

XP_022141765.1 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [Momordica charantia]5.62e-2971.25Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKS--KEKSFKRFIFKVMSEH
        DRISLLPDSLLH ILS LNT+  VQTCVLSKRW+++W  IPTLNFDFDSYPF++S RN+  S  KE SF+RFI +V+SEH
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKS--KEKSFKRFIFKVMSEH

XP_022141790.1 F-box/FBD/LRR-repeat protein At1g16930-like [Momordica charantia]5.33e-53100Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS
        DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]9.27e-2866.67Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEH-RGYIQKLS
        DRISLLPD LL HILS++NTK  VQTCVLSKRW+++W  IPTLNF+F SYPFEE + N  +SK+ SFK FIF+++SE  R  IQKLS
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEH-RGYIQKLS

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]1.62e-2566.25Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST--RNNPKSKEKSFKRFIFKVMSEH
        DRISLLPD LLHHILS+LNTK  VQTCVLSKRW+++W  IPTLNFD++SY    S+   N+ ++KEKSFK FIF+V+S+H
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST--RNNPKSKEKSFKRFIFKVMSEH

TrEMBL top hitse value%identityAlignment
A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X23.03e-2460.23Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTR-NNPKSKEKSFKRFIFKVMSEHRGY-IQKLS
        DRISLLPDSLLHHILS+ NTK  VQTC+LSKRW+++W  IPTLNFD++S+    S   ++ +SK +SFK FIF+V+S+H    IQKL+
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTR-NNPKSKEKSFKRFIFKVMSEHRGY-IQKLS

A0A5A7TCF1 F-box/LRR-repeat protein2.82e-2460.23Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTR-NNPKSKEKSFKRFIFKVMSEHRGY-IQKLS
        DRISLLPD+LLHHILSS NTK  VQTC+LSKRW+++W  IPTLNFD++S+    S   ++ +SK +SFK FIF+V+S+H    IQKL+
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTR-NNPKSKEKSFKRFIFKVMSEHRGY-IQKLS

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568202.72e-2971.25Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKS--KEKSFKRFIFKVMSEH
        DRISLLPDSLLH ILS LNT+  VQTCVLSKRW+++W  IPTLNFDFDSYPF++S RN+  S  KE SF+RFI +V+SEH
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKS--KEKSFKRFIFKVMSEH

A0A6J1CJ42 F-box/FBD/LRR-repeat protein At1g16930-like2.58e-53100Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS
        DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like4.49e-2866.67Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEH-RGYIQKLS
        DRISLLPD LL HILS++NTK  VQTCVLSKRW+++W  IPTLNF+F SYPFEE + N  +SK+ SFK FIF+++SE  R  IQKLS
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEH-RGYIQKLS

SwissProt top hitse value%identityAlignment
Q501G5 F-box protein At5g031008.5e-0947.06Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNF-----DFDSYPFEESTRNNPKSK
        D IS LPD +LHHIL++  TKLA++T VLSKRW+ VW+  P+++      D DS     S+ + PK K
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNF-----DFDSYPFEESTRNNPKSK

Q6NKX3 F-box/FBD/LRR-repeat protein At2g042301.0e-0945.57Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHR
        DRIS LPD+LL  ILSSL T+ A+ T VLSKRWRS+W  +P L FD +  P  +    +P      F   ++K +S H+
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHR

Q9FJ30 Putative F-box/LRR-repeat protein At5g418405.0e-0949.35Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKE-KSFKRFIFKVMS
        DRIS LPD+L+ HILS L TK A  T VL+KRW+ +   +P LNFD DS  F    R N  SK  +SF  F+  V++
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKE-KSFKRFIFKVMS

Q9FZ52 F-box/FBD/LRR-repeat protein At1g169301.0e-0955.56Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEE
        DRIS LPDSLL  ILS L+TK +V T VLSKRWR++W  +P L+ D +++P ++
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEE

Q9LXJ6 F-box/FBD/LRR-repeat protein At3g526807.6e-1058.93Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST
        DRIS LPD LL  ILSSL T + V T VLSK+WRS+W  +P L FD D Y  E  T
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST

Arabidopsis top hitse value%identityAlignment
AT1G16930.1 F-box/RNI-like/FBD-like domains-containing protein7.1e-1155.56Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEE
        DRIS LPDSLL  ILS L+TK +V T VLSKRWR++W  +P L+ D +++P ++
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEE

AT2G04230.1 FBD, F-box and Leucine Rich Repeat domains containing protein7.1e-1145.57Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHR
        DRIS LPD+LL  ILSSL T+ A+ T VLSKRWRS+W  +P L FD +  P  +    +P      F   ++K +S H+
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHR

AT3G52680.1 F-box/RNI-like/FBD-like domains-containing protein5.4e-1158.93Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST
        DRIS LPD LL  ILSSL T + V T VLSK+WRS+W  +P L FD D Y  E  T
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST

AT3G52680.2 F-box/RNI-like/FBD-like domains-containing protein5.4e-1158.93Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST
        DRIS LPD LL  ILSSL T + V T VLSK+WRS+W  +P L FD D Y  E  T
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEEST

AT5G41840.1 F-box/RNI-like superfamily protein3.5e-1049.35Show/hide
Query:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKE-KSFKRFIFKVMS
        DRIS LPD+L+ HILS L TK A  T VL+KRW+ +   +P LNFD DS  F    R N  SK  +SF  F+  V++
Subjt:  DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKE-KSFKRFIFKVMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCGAATCAGCCTTCTACCAGATTCTCTTCTCCACCACATTCTCTCCTCCTTAAACACAAAACTCGCTGTCCAGACTTGTGTTCTATCCAAACGGTGGAGGAGTGTTTG
GTTTCGTATACCAACACTCAACTTTGATTTTGACTCCTACCCATTTGAAGAGTCAACTAGAAACAATCCCAAATCCAAAGAAAAATCGTTTAAGCGCTTCATCTTCAAAG
TTATGTCTGAACATCGCGGATATATTCAAAAATTGAGT
mRNA sequenceShow/hide mRNA sequence
GATCGAATCAGCCTTCTACCAGATTCTCTTCTCCACCACATTCTCTCCTCCTTAAACACAAAACTCGCTGTCCAGACTTGTGTTCTATCCAAACGGTGGAGGAGTGTTTG
GTTTCGTATACCAACACTCAACTTTGATTTTGACTCCTACCCATTTGAAGAGTCAACTAGAAACAATCCCAAATCCAAAGAAAAATCGTTTAAGCGCTTCATCTTCAAAG
TTATGTCTGAACATCGCGGATATATTCAAAAATTGAGT
Protein sequenceShow/hide protein sequence
DRISLLPDSLLHHILSSLNTKLAVQTCVLSKRWRSVWFRIPTLNFDFDSYPFEESTRNNPKSKEKSFKRFIFKVMSEHRGYIQKLS