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MC11g1410 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1410
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationMC11:18634436..18634624
RNA-Seq ExpressionMC11g1410
SyntenyMC11g1410
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.74e-0646Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.74e-0646Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.72e-0646Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.74e-0646Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.71e-0646Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein8.45e-0746Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein8.43e-0746Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein8.42e-0746Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein8.32e-0746Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein8.29e-0746Show/hide
Query:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
        PK C FF   ++H  IN  DRLQ RLP+  LSP+ C +CN++ +  +H F
Subjt:  PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTAAAACATGTAATTTTTTTTTTTGTTGTGTGATGCATAGGGGCATAAATATTCATGATAGACTCCAAGCTAGACTACCTTCCATGTACTTAAGTCCAAGCCGTTGCAC
TATCTGCAATCAGAATAATGATTCTACGGATCATTATTTCTATATTATCCATACTCAACGTTCTTATGGATGCGTTTTT
mRNA sequenceShow/hide mRNA sequence
CCTAAAACATGTAATTTTTTTTTTTGTTGTGTGATGCATAGGGGCATAAATATTCATGATAGACTCCAAGCTAGACTACCTTCCATGTACTTAAGTCCAAGCCGTTGCAC
TATCTGCAATCAGAATAATGATTCTACGGATCATTATTTCTATATTATCCATACTCAACGTTCTTATGGATGCGTTTTT
Protein sequenceShow/hide protein sequence
PKTCNFFFCCVMHRGINIHDRLQARLPSMYLSPSRCTICNQNNDSTDHYFYIIHTQRSYGCVF