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MC11g1427 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1427
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING/U-box superfamily protein
Genome locationMC11:18893216..18893308
RNA-Seq ExpressionMC11g1427
SyntenyMC11g1427
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039247.1 putative E3 ubiquitin-protein ligase RNF217 isoform X2 [Cucumis melo var. makuwa]8.84e-1274.19Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCPHC+IYVE I+GCP++IC+CG++FCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

XP_008460341.1 PREDICTED: E3 ubiquitin-protein ligase RNF144B-like [Cucumis melo]3.99e-1177.42Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RCPHCKIYVE+  GC HI+C+CGSEFCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

XP_022949425.1 probable E3 ubiquitin-protein ligase rbrA [Cucurbita moschata]5.69e-1174.19Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCPHCKIYVE+I GC H  C+CGS FCY C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

XP_023524679.1 probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo]5.69e-1174.19Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCPHCKIYVE+I GC H  C+CGS FCY C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

XP_023527456.1 probable E3 ubiquitin-protein ligase rbrA [Cucurbita pepo subsp. pepo]2.58e-1180.65Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCPHCKI VE+I+GC HI C+CGSEFCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

TrEMBL top hitse value%identityAlignment
A0A0A0L952 Uncharacterized protein3.72e-1174.19Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RCPHCKIYVE+  GC HI+C+CGS+FCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

A0A1S3CDI0 E3 ubiquitin-protein ligase RNF144B-like1.93e-1177.42Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RCPHCKIYVE+  GC HI+C+CGSEFCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

A0A5A7TCD1 Putative E3 ubiquitin-protein ligase RNF217 isoform X24.28e-1274.19Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCPHC+IYVE I+GCP++IC+CG++FCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

A0A5A7UED3 E3 ubiquitin-protein ligase RNF144B-like protein1.93e-1177.42Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RCPHCKIYVE+  GC HI+C+CGSEFCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

A0A6J1GCQ5 probable E3 ubiquitin-protein ligase rbrA2.75e-1174.19Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCPHCKIYVE+I GC H  C+CGS FCY C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

SwissProt top hitse value%identityAlignment
A4IIY1 Probable E3 ubiquitin-protein ligase RNF144A1.0e-0453.12Show/hide
Query:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC
        KRCP CK+Y+ER +GC  ++CK C   FC+ C
Subjt:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC

P50876 E3 ubiquitin-protein ligase RNF144A1.0e-0453.12Show/hide
Query:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC
        KRCP CK+Y+ER +GC  ++CK C   FC+ C
Subjt:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC

Q5RFV4 Probable E3 ubiquitin-protein ligase RNF144A-A1.0e-0453.12Show/hide
Query:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC
        KRCP CK+Y+ER +GC  ++CK C   FC+ C
Subjt:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC

Q6DH94 Probable E3 ubiquitin-protein ligase RNF144A-B1.0e-0453.12Show/hide
Query:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC
        KRCP CK+Y+ER +GC  ++CK C   FC+ C
Subjt:  KRCPHCKIYVERIQGCPHIICK-CGSEFCYSC

Q9US46 E3 ubiquitin-protein ligase itt11.0e-0454.84Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RCP C   VERI GC H+ C CG+ FC+ C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

Arabidopsis top hitse value%identityAlignment
AT2G26135.1 RING/U-box protein with C6HC-type zinc finger3.2e-0651.61Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        ++C  CK  +E  QGC  +IC+CG EFCY C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

AT3G14250.1 RING/U-box superfamily protein4.1e-0958.06Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RCP CK YV++++GC HI C+CG +FCY C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

AT3G53690.1 RING/U-box superfamily protein5.9e-0858.06Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        KRCP CK Y+E+ QGC ++ C+CG  FCY+C
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

AT4G19670.1 RING/U-box superfamily protein7.7e-0858.06Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RC  C+I +E  QGC H+ C+CG EFCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC

AT4G19670.2 RING/U-box superfamily protein7.7e-0858.06Show/hide
Query:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC
        +RC  C+I +E  QGC H+ C+CG EFCYSC
Subjt:  KRCPHCKIYVERIQGCPHIICKCGSEFCYSC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAGATGTCCCCATTGCAAAATTTACGTGGAGAGGATTCAAGGTTGTCCCCATATCATATGTAAGTGTGGGTCTGAGTTTTGCTATAGCTGT
mRNA sequenceShow/hide mRNA sequence
AAGAGATGTCCCCATTGCAAAATTTACGTGGAGAGGATTCAAGGTTGTCCCCATATCATATGTAAGTGTGGGTCTGAGTTTTGCTATAGCTGT
Protein sequenceShow/hide protein sequence
KRCPHCKIYVERIQGCPHIICKCGSEFCYSC