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MC11g1429 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1429
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING/U-box superfamily protein
Genome locationMC11:18904815..18904949
RNA-Seq ExpressionMC11g1429
SyntenyMC11g1429
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016020 - membrane (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002867 - IBR domain
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFZ17290.1 RING/U-box superfamily protein [Actinidia rufa]8.82e-1764.44Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        +ELA   SW+KCPHCK YVEKTEGC H+ C C F+FCY+CG  W+
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
XP_015887437.1 probable E3 ubiquitin-protein ligase RNF217 [Ziziphus jujuba]4.39e-1666.67Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELA+  +WK+CPHCK YVEKTEGC HI C C F+FCY+CG  W 
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
XP_015887444.1 probable E3 ubiquitin-protein ligase RNF217 [Ziziphus jujuba]3.31e-1668.89Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELAE   WK+CP CK YVEKTEGC HI C C+F+FCY CG  WN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
XP_021802002.1 probable E3 ubiquitin-protein ligase RNF144A [Prunus avium]4.15e-1666.67Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELA++  WK+CP CK YVE+TEGC HI C C F+FCY CGG WN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
XP_022156852.1 probable E3 ubiquitin-protein ligase ARI8 [Momordica charantia]1.16e-28100Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
TrEMBL top hitse value%identityAlignment
A0A6J1DT24 probable E3 ubiquitin-protein ligase ARI85.60e-29100Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
A0A6P4A1Y1 probable E3 ubiquitin-protein ligase RNF2172.12e-1666.67Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELA+  +WK+CPHCK YVEKTEGC HI C C F+FCY+CG  W 
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
A0A6P4AMY1 probable E3 ubiquitin-protein ligase RNF2171.60e-1668.89Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELAE   WK+CP CK YVEKTEGC HI C C+F+FCY CG  WN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
A0A6P5RGP4 probable E3 ubiquitin-protein ligase RNF144A2.01e-1666.67Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        KELA++  WK+CP CK YVE+TEGC HI C C F+FCY CGG WN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
A0A7J0H2H7 RING/U-box superfamily protein4.27e-1764.44Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        +ELA   SW+KCPHCK YVEKTEGC H+ C C F+FCY+CG  W+
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
SwissProt top hitse value%identityAlignment
D3YYI7 Probable E3 ubiquitin-protein ligase RNF2171.0e-0554.55Show/hide
Query:  KKCPHCKIYVEKTEGCSHIIC-MCTFEFCYSCG
        +KCP CKI++++TEGC H+ C  C   FCY CG
Subjt:  KKCPHCKIYVEKTEGCSHIIC-MCTFEFCYSCG
F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic1.9e-0442.5Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSC
        K+ A+  + K+CP CK  +EKT+GC+H+ C C    C++C
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSC
P0CE10 ATP-dependent RNA helicase DEAH11, chloroplastic1.9e-0442.5Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSC
        K+ A+    K+CP CK  +EKT+GC+H+ C C    C++C
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSC
Q4KLT0 Probable E3 ubiquitin-protein ligase RNF2171.0e-0551.52Show/hide
Query:  KKCPHCKIYVEKTEGCSHIIC-MCTFEFCYSCG
        +KCP CK+++++TEGC H+ C  C   FCY CG
Subjt:  KKCPHCKIYVEKTEGCSHIIC-MCTFEFCYSCG
Q8TC41 Probable E3 ubiquitin-protein ligase RNF2171.0e-0554.55Show/hide
Query:  KKCPHCKIYVEKTEGCSHIIC-MCTFEFCYSCG
        +KCP CKI++++TEGC H+ C  C   FCY CG
Subjt:  KKCPHCKIYVEKTEGCSHIIC-MCTFEFCYSCG
Arabidopsis top hitse value%identityAlignment
AT2G21420.1 IBR domain containing protein2.4e-1053.33Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        K LA +  W++C  C   VE  EGC+HI C C FEFCY CG  WN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
AT3G14250.1 RING/U-box superfamily protein4.4e-1250Show/hide
Query:  ELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        ++A+   W++CP CK YV+K EGC HI C C ++FCY CG  W+
Subjt:  ELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
AT3G45580.1 RING/U-box protein with C6HC-type zinc finger2.0e-0947.73Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGW
        K LA +  W++C +CK  +E +EGC HI C C  +FCY CG  W
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGW
AT5G37560.1 RING/U-box superfamily protein4.1e-1052.27Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGW
        K LA    W++C  CK  +E TEGC+HI C C +EFCY CG  W
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGW
AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein2.8e-1151.11Show/hide
Query:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN
        K LA    W++C  C+  +E ++GC+HI C C  EFCY+CGGGWN
Subjt:  KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGAGCTGGCCGAGAGGATGAGTTGGAAGAAATGTCCCCACTGCAAGATTTATGTGGAGAAGACTGAAGGTTGCTCCCATATCATCTGTATGTGTACGTTTGAGTTTTG
TTATAGCTGTGGAGGAGGGTGGAAT
mRNA sequenceShow/hide mRNA sequence
AAGGAGCTGGCCGAGAGGATGAGTTGGAAGAAATGTCCCCACTGCAAGATTTATGTGGAGAAGACTGAAGGTTGCTCCCATATCATCTGTATGTGTACGTTTGAGTTTTG
TTATAGCTGTGGAGGAGGGTGGAAT
Protein sequenceShow/hide protein sequence
KELAERMSWKKCPHCKIYVEKTEGCSHIICMCTFEFCYSCGGGWN