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MC11g1439 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1439
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionphytochromobilin:ferredoxin oxidoreductase, chloroplastic
Genome locationMC11:19196158..19196313
RNA-Seq ExpressionMC11g1439
SyntenyMC11g1439
Gene Ontology termsGO:0010019 - chloroplast-nucleus signaling pathway (biological process)
GO:0010024 - phytochromobilin biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0050619 - phytochromobilin:ferredoxin oxidoreductase activity (molecular function)
GO:0050897 - cobalt ion binding (molecular function)
InterPro domainsIPR009249 - Ferredoxin-dependent bilin reductase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067231.1 phytochromobilin:ferredoxin oxidoreductase [Cucumis melo var. makuwa]1.59e-1576Show/hide
Query:  KTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        +T  LQLL W GKLTS+SLKFFSPIVIW+KF S ESKYDIL  A MDYYK
Subjt:  KTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
XP_004139053.1 phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis sativus]4.29e-1574.51Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIW+KF S ESKYDILF A MDYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
XP_008450371.1 PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Cucumis melo]5.87e-1472.55Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIW+KF S ESKYDIL  A MDYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
XP_022154370.1 phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Momordica charantia]1.63e-1574.51Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIWTKFPS  SKYDILF A +DYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
XP_038880083.1 phytochromobilin:ferredoxin oxidoreductase, chloroplastic [Benincasa hispida]1.60e-1472.55Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIW+KF S ESKYDILF A +DYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
TrEMBL top hitse value%identityAlignment
A0A0A0LXG3 Uncharacterized protein2.08e-1574.51Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIW+KF S ESKYDILF A MDYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
A0A1S3BP29 phytochromobilin:ferredoxin oxidoreductase, chloroplastic2.84e-1472.55Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIW+KF S ESKYDIL  A MDYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
A0A5A7VNP0 Phytochromobilin:ferredoxin oxidoreductase7.67e-1676Show/hide
Query:  KTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        +T  LQLL W GKLTS+SLKFFSPIVIW+KF S ESKYDIL  A MDYYK
Subjt:  KTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
A0A6J1DJE9 phytochromobilin:ferredoxin oxidoreductase, chloroplastic7.91e-1674.51Show/hide
Query:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        L T + +LL W GKLTS+SLKFFSPIVIWTKFPS  SKYDILF A +DYYK
Subjt:  LKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
A0A7J6FMN4 Uncharacterized protein1.67e-1367.35Show/hide
Query:  TDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        TDF+QLL W GKLTS+SL FFSPIVIWT+F   + KYD+L+ A +DYYK
Subjt:  TDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
SwissProt top hitse value%identityAlignment
Q9SR43 Phytochromobilin:ferredoxin oxidoreductase, chloroplastic6.2e-0746.81Show/hide
Query:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        + +   W GKLT +S+KFFSP+V+WT+F S + K+  LF A ++YY+
Subjt:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
Arabidopsis top hitse value%identityAlignment
AT3G09150.1 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)4.4e-0846.81Show/hide
Query:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        + +   W GKLT +S+KFFSP+V+WT+F S + K+  LF A ++YY+
Subjt:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
AT3G09150.2 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)4.4e-0846.81Show/hide
Query:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        + +   W GKLT +S+KFFSP+V+WT+F S + K+  LF A ++YY+
Subjt:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
AT3G09150.3 phytochromobilin:ferredoxin oxidoreductase, chloroplast / phytochromobilin synthase (HY2)4.4e-0846.81Show/hide
Query:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK
        + +   W GKLT +S+KFFSP+V+WT+F S + K+  LF A ++YY+
Subjt:  FLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTACTGAAAACAGACTTCCTGCAGCTCTTATCGTGGAGCGGAAAGCTTACGAGCAAATCTTTGAAATTTTTCTCACCGATCGTGATATGGACTAAATTTCCCTCGATCGA
GTCCAAGTACGACATATTATTTTTTGCATCCATGGATTATTATAAG
mRNA sequenceShow/hide mRNA sequence
TTACTGAAAACAGACTTCCTGCAGCTCTTATCGTGGAGCGGAAAGCTTACGAGCAAATCTTTGAAATTTTTCTCACCGATCGTGATATGGACTAAATTTCCCTCGATCGA
GTCCAAGTACGACATATTATTTTTTGCATCCATGGATTATTATAAG
Protein sequenceShow/hide protein sequence
LLKTDFLQLLSWSGKLTSKSLKFFSPIVIWTKFPSIESKYDILFFASMDYYK