; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g1444 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1444
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPhotosystem I P700 chlorophyll a apoprotein A2
Genome locationMC11:19251678..19251815
RNA-Seq ExpressionMC11g1444
SyntenyMC11g1444
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR036408 - Photosystem I PsaA/PsaB superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAL79470.1 PsaB, partial [Phaseolus vulgaris]4.35e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
ACF36991.1 PsaB, partial [Lippia alba]5.00e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
ACF37003.1 PsaB, partial [Lippia alba]4.88e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
RYR01979.1 hypothetical protein Ahy_B06g080840 isoform B [Arachis hypogaea]5.13e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
WP_156524861.1 hypothetical protein, partial [Paenarthrobacter nicotinovorans]3.97e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
TrEMBL top hitse value%identityAlignment
B4ZXH6 PsaB (Fragment)2.36e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
B4ZXL0 PsaB (Fragment)2.36e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
B8R8J8 PsaB (Fragment)2.36e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
B8R8K0 PsaB (Fragment)2.36e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
Q8LVW7 PsaB (Fragment)2.11e-0863.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
SwissProt top hitse value%identityAlignment
A1EA07 Photosystem I P700 chlorophyll a apoprotein A25.5e-0763.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
Q33332 Photosystem I P700 chlorophyll a apoprotein A25.5e-0763.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
Q3V535 Photosystem I P700 chlorophyll a apoprotein A25.5e-0763.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
Q70Y04 Photosystem I P700 chlorophyll a apoprotein A25.5e-0763.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
Q8S8X5 Photosystem I P700 chlorophyll a apoprotein A25.5e-0763.83Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRWRDKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
Arabidopsis top hitse value%identityAlignment
ATCG00340.1 Photosystem I, PsaA/PsaB protein8.7e-0861.7Show/hide
Query:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG
        ANLIRW+DKPVALSIVQARLVGLA  S  +   Y+  L    S +FG
Subjt:  ANLIRWRDKPVALSIVQARLVGLAWIS-RFHKRYSLILSCGISTRFG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCTAATTTGATTCGATGGAGAGATAAACCTGTGGCTCTTTCCATTGTCCAAGCAAGATTAGTTGGATTAGCGTGGATATCGAGGTTCCACAAGCGGTACTCCCTGATACT
GAGTTGTGGAATTTCAACTAGATTTGGA
mRNA sequenceShow/hide mRNA sequence
GCTAATTTGATTCGATGGAGAGATAAACCTGTGGCTCTTTCCATTGTCCAAGCAAGATTAGTTGGATTAGCGTGGATATCGAGGTTCCACAAGCGGTACTCCCTGATACT
GAGTTGTGGAATTTCAACTAGATTTGGA
Protein sequenceShow/hide protein sequence
ANLIRWRDKPVALSIVQARLVGLAWISRFHKRYSLILSCGISTRFG