; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC11g1453 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC11g1453
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L16, chloroplastic
Genome locationMC11:19408361..19408716
RNA-Seq ExpressionMC11g1453
SyntenyMC11g1453
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR016180 - Ribosomal protein L10e/L16
IPR020798 - Ribosomal protein L16, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDK99983.1 ribosomal protein L16 [Siraitia grosvenorii]4.33e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

QJA16182.1 ribosomal protein L16 [Siraitia grosvenorii]4.63e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

YP_009674428.1 ribosomal protein L16 [Siraitia grosvenorii]2.65e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

YP_009752703.1 ribosomal protein L16 [Ampelosycios humblotii]4.48e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

YP_009752957.1 ribosomal protein L16 [Momordica sessilifolia]4.48e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

TrEMBL top hitse value%identityAlignment
A0A514YKW7 50S ribosomal protein L16, chloroplastic1.28e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

A0A515BLR4 50S ribosomal protein L16, chloroplastic2.10e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

A0A6C0UEP4 50S ribosomal protein L16, chloroplastic1.28e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

A0A6H0EU26 50S ribosomal protein L16, chloroplastic2.17e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

A0A6H0EX62 50S ribosomal protein L16, chloroplastic2.17e-7190.76Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK
        MKGISYRGNRICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPN-ILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

SwissProt top hitse value%identityAlignment
B1NWI7 50S ribosomal protein L16, chloroplastic6.3e-5587.39Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK
        MKGI++RGNRICF RYA+QALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFI SG
Subjt:  VISIAASKMPIRTQFITSG

Q09ME0 50S ribosomal protein L16, chloroplastic5.3e-5486.55Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK
        MKGISYRGN ICF RYA+QALEPAWIT RQIEAGRR MTRN RRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEM GV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFI SG
Subjt:  VISIAASKMPIRTQFITSG

Q0ZIY1 50S ribosomal protein L16, chloroplastic6.3e-5587.39Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK
        MKGISYRGNRICF RYA+QALEPAWIT RQIEAGRR MTRN RRGGKIW  IFPDKPVT+RPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFI SG
Subjt:  VISIAASKMPIRTQFITSG

Q49KW1 50S ribosomal protein L16, chloroplastic1.4e-5486.55Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK
        MKGISYRGNRICF +YA+QALEPAWIT RQIEAGRR MTRN RRGGKIW  IFPDKPVT+RPT+TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFI SG
Subjt:  VISIAASKMPIRTQFITSG

Q4VZN1 50S ribosomal protein L16, chloroplastic2.8e-5589.08Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK
        MKGISYRGN ICF RYAIQALEPAWIT RQIEAGRR MTRNARRGGKIW  IFPDKPVTLRPT+TRMGSGKGSPEYWV VVKP  ILYEM GV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITSG
         ISIAASKMPIRTQFITSG
Subjt:  VISIAASKMPIRTQFITSG

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 125.1e-3664.96Show/hide
Query:  KGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARKV
        KG+S +G  IC  RYA+Q LEPAWIT RQIEAGRR MTRN  RG  +   IF DKPVT+RP +TRMG GKG+P +WV VVKP  I+YEMGGV E +AR+ 
Subjt:  KGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARKV

Query:  ISIAASKMPIRTQFITS
        ISIAASK+P +T+FI S
Subjt:  ISIAASKMPIRTQFITS

ATCG00790.1 ribosomal protein L163.0e-5283.05Show/hide
Query:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK
        +KGIS RGNRICF RYA+Q LEPAWIT RQIEAGRR MTRN RRGGKIW  IFPDKPVT+RP +TRMGSGKGSPEYWV VVKP  ILYEMGGV ENIARK
Subjt:  MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGVVENIARK

Query:  VISIAASKMPIRTQFITS
         ISIAASKMPI+TQFI S
Subjt:  VISIAASKMPIRTQFITS

ATMG00080.1 ribosomal protein L161.2e-1637.4Show/hide
Query:  KGISYRGNRICFDRYAIQALEPAWITYRQIEAGR--------RVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGV
        +G    G ++ F RY  ++ +   ++YR IEA R        R M+   RR GKIW  +F D P+T +PT+ RMG GKG+P  W+  V    I +EM GV
Subjt:  KGISYRGNRICFDRYAIQALEPAWITYRQIEAGR--------RVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKP-NILYEMGGV

Query:  VENIARKVISIAASKMPIRTQFI
            AR+  ++AA K    T+F+
Subjt:  VENIARKVISIAASKMPIRTQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGATAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATATAGACAAATCGAAGCAGGACGAAGGGT
AATGACACGAAATGCGCGACGCGGAGGAAAAATATGGGAACCTATATTTCCAGACAAGCCTGTTACACTAAGACCTACACAAACACGGATGGGTTCAGGGAAAGGATCCC
CCGAATATTGGGTAGTTGTTGTTAAACCAAATATACTTTATGAAATGGGTGGAGTAGTAGAAAATATAGCCAGAAAAGTTATTTCAATAGCGGCGTCTAAAATGCCTATA
CGAACCCAATTTATTACTTCGGGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAATATCTTATCGAGGCAATCGTATTTGCTTCGATAGATACGCTATTCAGGCACTTGAACCCGCTTGGATCACATATAGACAAATCGAAGCAGGACGAAGGGT
AATGACACGAAATGCGCGACGCGGAGGAAAAATATGGGAACCTATATTTCCAGACAAGCCTGTTACACTAAGACCTACACAAACACGGATGGGTTCAGGGAAAGGATCCC
CCGAATATTGGGTAGTTGTTGTTAAACCAAATATACTTTATGAAATGGGTGGAGTAGTAGAAAATATAGCCAGAAAAGTTATTTCAATAGCGGCGTCTAAAATGCCTATA
CGAACCCAATTTATTACTTCGGGA
Protein sequenceShow/hide protein sequence
MKGISYRGNRICFDRYAIQALEPAWITYRQIEAGRRVMTRNARRGGKIWEPIFPDKPVTLRPTQTRMGSGKGSPEYWVVVVKPNILYEMGGVVENIARKVISIAASKMPI
RTQFITSG