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MELO.jh005152.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh005152.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGlycine cleavage T-protein family
Genome locationchr03:5513743..5517459
RNA-Seq ExpressionMELO.jh005152.1
SyntenyMELO.jh005152.1
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR017703 - YgfZ/GcvT conserved site
IPR027266 - GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058924.1 putative transferase [Cucumis melo var. makuwa]1.57e-8399.17Show/hide
Query:  MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTH
        MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTH
Subjt:  MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTH

Query:  HQGVIRKRVVPLKFLNDRGE
        HQGVIRKRVVPLKFLNDRGE
Subjt:  HQGVIRKRVVPLKFLNDRGE

TYK19475.1 putative transferase [Cucumis melo var. makuwa]1.73e-5883.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GEDNG QWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

XP_004147948.1 putative transferase At4g12130, mitochondrial [Cucumis sativus]2.19e-5983.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GED GWQWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

XP_008448910.1 PREDICTED: putative transferase At4g12130, mitochondrial [Cucumis melo]1.73e-5883.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GEDNG QWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

XP_038876818.1 putative transferase At4g12130, mitochondrial [Benincasa hispida]2.24e-5983.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GED GWQWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

TrEMBL top hitse value%identityAlignment
A0A0A0L5P2 Uncharacterized protein1.06e-5983.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GED GWQWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

A0A1S3BKT7 putative transferase At4g12130, mitochondrial8.39e-5983.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GEDNG QWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

A0A5A7UUY1 Putative transferase7.58e-8499.17Show/hide
Query:  MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTH
        MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTH
Subjt:  MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTH

Query:  HQGVIRKRVVPLKFLNDRGE
        HQGVIRKRVVPLKFLNDRGE
Subjt:  HQGVIRKRVVPLKFLNDRGE

A0A5D3D7G0 Putative transferase8.39e-5983.48Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GEDNG QWFQDPRLECL            PLIEADKETDEDNYVLWRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPLKFLNDRGE
Subjt:  RKRVVPLKFLNDRGE

A0A6J1HMR6 putative transferase At4g12130, mitochondrial2.87e-5880Show/hide
Query:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI
        +GED GWQWFQDPRL+CL            PL+EADKETDEDNYV+WRLEKGV++GS EIQKGEAIPLEYNLVGLNAISFDKGCYV QELVARTHH+GVI
Subjt:  KGEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVI

Query:  RKRVVPLKFLNDRGE
        RKRVVPL+FLNDRGE
Subjt:  RKRVVPLKFLNDRGE

SwissProt top hitse value%identityAlignment
B8JMH0 Putative transferase CAF17 homolog, mitochondrial5.6e-1544.68Show/hide
Query:  GWQWF---QDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPL
        GW+     QD  L+    ++ A +  + + Y   R E G+ +G  ++  GEA+PLE NLV +  ISF KGCY+ QEL ARTHH GVIRKR++P+
Subjt:  GWQWF---QDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPL

Q54NS1 Putative transferase caf17 homolog, mitochondrial1.6e-1454.41Show/hide
Query:  DEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPL
        DE  Y L+RL +G+ QG  E Q G  IPLEYN   LN + F KGCY+ QEL +RTH  G+IRKR+ P+
Subjt:  DEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPL

Q5T440 Putative transferase CAF17, mitochondrial4.3e-1547.5Show/hide
Query:  LIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPLKFLN
        L+   +  D  +Y   R  +GV +G  ++  G A+PLE NL  +N +SF KGCY+ QEL ARTHH GVIRKR+ P++FL+
Subjt:  LIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPLKFLN

Q8CAK1 Putative transferase CAF17 homolog, mitochondrial4.3e-1552.17Show/hide
Query:  DEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPLK
        D  +Y  +R ++G+ +G  ++  G A+PLE NLV +N +SF KGCY+ QEL ARTHH GVIRKR+ P+K
Subjt:  DEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVVPLK

Q8L733 Putative transferase At4g12130, mitochondrial9.2e-4267.54Show/hide
Query:  GEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIR
        G   GWQW++DPRLECL            PL+EADKETDE NY+LWRLE GV++GS EI KGEAIPLEYN VGLNAISFDKGCYV QEL+ARTHH+GVIR
Subjt:  GEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIR

Query:  KRVVPLKFLNDRGE
        KR++PL+F++  G+
Subjt:  KRVVPLKFLNDRGE

Arabidopsis top hitse value%identityAlignment
AT4G12130.1 Glycine cleavage T-protein family6.6e-4367.54Show/hide
Query:  GEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIR
        G   GWQW++DPRLECL            PL+EADKETDE NY+LWRLE GV++GS EI KGEAIPLEYN VGLNAISFDKGCYV QEL+ARTHH+GVIR
Subjt:  GEDNGWQWFQDPRLECLA-----------PLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIR

Query:  KRVVPLKFLNDRGE
        KR++PL+F++  G+
Subjt:  KRVVPLKFLNDRGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTGGGGTGCTAGTGTTGATCCAACAACAATGTCAGCTTCACAAGGGGGAAGACAATGGTTGGCAATGGTTTCAAGATCCAAGATTGGAATGCCTTGCTCCTCT
CATTGAGGCAGATAAAGAAACAGATGAAGATAATTATGTACTTTGGAGACTGGAGAAGGGAGTTTCCCAAGGTTCAAATGAGATTCAAAAAGGTGAGGCAATCCCTCTTG
AATACAACCTGGTAGGCCTAAATGCAATAAGTTTTGACAAAGGGTGCTACGTATGGCAAGAACTTGTAGCTCGAACACACCACCAAGGAGTTATCCGTAAACGTGTAGTT
CCTTTGAAGTTTCTAAATGACAGAGGCGAAGGTTTTGCCATAATCCATTGGAGCAATGAAGCCATATTTGCGGCAATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACGAACGACACCCATCTCTATTTTTCATCACCACGCGGCCACAAACGACGAACCACGGCAGCCATATCTGATTATTTTTCATTTTCTCACGTTTAGTCGCC
CCCTTCGCTCCCATTTCCACGCTGCCCTCAGCTGCCGAAGTCTCAACCTTCCGACAAGATCGCAGACGCCTCCCATCTATCTCACAATCTATTTCTTGTTACAAACACTG
GTTAGTGATTGGTTCATTTGATTTTTAGATGGAACCGGACAAAAAACTTGAAATGGAAGACCCTGAGAAGAAGAAGAAGAAAGAAGAAAAGAAATGTTTCCTCTATAGAG
GAACCAGAGGCTACCAATGTTGGGTGGGGTGCTAGTGTTGATCCAACAACAATGTCAGCTTCACAAGGGGGAAGACAATGGTTGGCAATGGTTTCAAGATCCAAGATTGG
AATGCCTTGCTCCTCTCATTGAGGCAGATAAAGAAACAGATGAAGATAATTATGTACTTTGGAGACTGGAGAAGGGAGTTTCCCAAGGTTCAAATGAGATTCAAAAAGGT
GAGGCAATCCCTCTTGAATACAACCTGGTAGGCCTAAATGCAATAAGTTTTGACAAAGGGTGCTACGTATGGCAAGAACTTGTAGCTCGAACACACCACCAAGGAGTTAT
CCGTAAACGTGTAGTTCCTTTGAAGTTTCTAAATGACAGAGGCGAAGGTTTTGCCATAATCCATTGGAGCAATGAAGCCATATTTGCGGCAATTCATTGATGTATATGCA
TTTTTGTAGGTTTGGTAGGAATATTTTTGGTTCAAATGTACTTATTTAAATAGCTTGTTCGTACCAAAACA
Protein sequenceShow/hide protein sequence
MLGGVLVLIQQQCQLHKGEDNGWQWFQDPRLECLAPLIEADKETDEDNYVLWRLEKGVSQGSNEIQKGEAIPLEYNLVGLNAISFDKGCYVWQELVARTHHQGVIRKRVV
PLKFLNDRGEGFAIIHWSNEAIFAAIH