; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO.jh005200.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh005200.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr03:6334210..6337594
RNA-Seq ExpressionMELO.jh005200.1
SyntenyMELO.jh005200.1
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23780.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.66e-182100Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
        PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

XP_008441580.1 PREDICTED: pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X1 [Cucumis melo]8.01e-184100Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
        PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

XP_011657317.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial [Cucumis sativus]2.46e-17595.47Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MHLQLNKLLGAHKALLSHYSSLIR+CLV+GSVHNAKTIH QLLKLGLDSNTFL N CLQLY LFGPVHDVLK FDGIKDKNIISWNICLKGMFRFGDVD 
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
         RHLFDVMPERDIVSWNTMISGYVSSGF  SAMG+SLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

XP_022146799.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Momordica charantia]1.98e-13976.14Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        M L L KL+GAH+A +S YS LI QCL + SVH AKTIHAQL+KLGL++NTFLGN CLQLY LFGPVH+VLK F  IK+KN ISWNICLKG+F+FGD+  
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
           LFD M ERD VSWN+MISGYVSSGF  SAM + L+MQNAGFR SEYTFSIL+SLVS   HGKQ+HGSMIRSGVDVSS+VLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELE
        F IF +MEKVDVISWNSLILGCHRSGFRVLALNQF LMRTTEHSPD+FT+S V+S+CC LQ  +
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELE

XP_038884752.1 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like [Benincasa hispida]1.49e-16587.92Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MHL LNKL GA KA L+HYS LI QCL +GSVHNAKTIHAQLLKLGLDSNTFLGN CLQLY  FGPV+DVLK FDGIKDKNIISWNICLKG+FRFG+V+ 
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
         RHLFDVMP+RDIVSWNTMISGYVSSGFA +AM +SLEM+NAGFRPS+YTFSILLSLVSSAFHGKQVHGSMIRSGVDVS +VLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        F IF  MEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCL+ELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

TrEMBL top hitse value%identityAlignment
A0A1S3B3Q8 pentatricopeptide repeat-containing protein At1g43980, mitochondrial isoform X13.88e-184100Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
        PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

A0A5D3DK49 Pentatricopeptide repeat-containing protein8.04e-183100Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
        PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

A0A6J1CZ40 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like9.57e-14076.14Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        M L L KL+GAH+A +S YS LI QCL + SVH AKTIHAQL+KLGL++NTFLGN CLQLY LFGPVH+VLK F  IK+KN ISWNICLKG+F+FGD+  
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
           LFD M ERD VSWN+MISGYVSSGF  SAM + L+MQNAGFR SEYTFSIL+SLVS   HGKQ+HGSMIRSGVDVSS+VLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELE
        F IF +MEKVDVISWNSLILGCHRSGFRVLALNQF LMRTTEHSPD+FT+S V+S+CC LQ  +
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELE

A0A6J1D0P4 pentatricopeptide repeat-containing protein At1g43980, mitochondrial-like1.49e-13977.36Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        M L L KL+GAH+A +S YS LI QCL + SVH AKTIHAQL+KLGL++NTFLGN CLQLY LFGPVH+VLK F  IK+KN+ISWNICLKG+FRFGD+  
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
           LFD M ERD VSWN+MISGYVSSGF  SAM + LEMQNAGFR SEYTFSILLSLVS   HGKQ+HGSMIRSGVDVSS+VLGNSLIDMYGKVGLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        F IF +MEKVDVISWNSLILGCHRSGFRVLALNQF LMRTTEHSPD+FT+S+V+S+CC LQ  +L
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

A0A6J1JL44 pentatricopeptide repeat-containing protein At1g43980, mitochondrial1.90e-13776.98Show/hide
Query:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA
        MH  L  L GAH+A  SHYS LI QCL   SVH AKTIHAQLLKLGL++NTFLGN CLQLY LFGPVH+  + F  IK+KNI+SWNICLKG+FRFG VD 
Subjt:  MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDA

Query:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM
         R+LFD MPERDIVSWN M+SG VSSGFA  AM + LEMQ+AGFRPSEYTFSILLS+VS   HGKQ+HGSMIRSG+DVS++VLGNSLIDMYGK GLVDYM
Subjt:  PRHLFDVMPERDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYM

Query:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
        FV+F SMEKVDVISWNSLILGCHRSGFRVLALNQFFLMR T HSPDQFT+S++IS+C  LQELEL
Subjt:  FVIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

SwissProt top hitse value%identityAlignment
O23169 Pentatricopeptide repeat-containing protein At4g371707.1e-3031.82Show/hide
Query:  KLLG-AHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLF
        +LLG A K   S Y +LI+ C    ++   K +H  +   G      + N  L++Y   G + D  K FD + ++++ SWN+ + G    G ++  R LF
Subjt:  KLLG-AHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLF

Query:  DVMPERDIVSWNTMISGYVSSGFAKSAMGI-SLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMF
        D M E+D  SW  M++GYV     + A+ + SL  +    RP+ +T SI +   + V     GK++HG ++R+G+D S  VL +SL+DMYGK G +D   
Subjt:  DVMPERDIVSWNTMISGYVSSGFAKSAMGI-SLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMF

Query:  VIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
         IF  + + DV+SW S+I    +S       + F  +  +   P+++T + V++ C  L   EL
Subjt:  VIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL

O80488 Pentatricopeptide repeat-containing protein At1g091904.1e-3030.4Show/hide
Query:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT
        Y+ L++ C  +  +   K +H +L++ G      +    ++LYT  G + D  K FD + ++N++ WN+ ++G    GDV+   HLF  M ER IVSWN+
Subjt:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT

Query:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSS---AFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW
        MIS     G  + A+ +  EM + GF P E T   +L + +S      GK +H +   SG+    + +GN+L+D Y K G ++    IF  M++ +V+SW
Subjt:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSS---AFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW

Query:  NSLILGCHRSGFRVLALNQF-FLMRTTEHSPDQFTISMVISICCCLQELE
        N+LI G   +G     ++ F  ++   + +P++ T   V++ C    ++E
Subjt:  NSLILGCHRSGFRVLALNQF-FLMRTTEHSPDQFTISMVISICCCLQELE

Q8S9M4 Pentatricopeptide repeat-containing protein At2g410809.2e-3029.51Show/hide
Query:  SHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSW
        S ++  I+ C    S+ + K +H  L+  G  S+ F+ NH + +Y+  G     +  +  ++ KN +S NI + G  R GD+   R +FD MP+R + +W
Subjt:  SHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSW

Query:  NTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLS---LVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVI
        N MI+G +   F +  + +  EM   GF P EYT   + S    + S   G+Q+HG  I+ G+++  +V+ +SL  MY + G +    ++  SM   +++
Subjt:  NTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLS---LVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVI

Query:  SWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC
        +WN+LI+G  ++G     L  + +M+ +   P++ T   V+S C
Subjt:  SWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC

Q9LP03 Pentatricopeptide repeat-containing protein At1g43980, mitochondrial8.8e-6550.41Show/hide
Query:  HYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWN
        ++S L+ + L+  S   AK +HAQLL+ G    T+ GN CLQLY   G V + L+ FD I DKN I+WN+CLKG+F+ G ++    LFD MPERD+VSWN
Subjt:  HYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWN

Query:  TMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNS
        TMISG VS GF +  + +  +MQ    RP+E+TFSIL SLV+   HG+Q+HG+ I SGV   ++V+ NS++DMY ++G+ DY   +F +ME  DV+SWN 
Subjt:  TMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNS

Query:  LILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQEL
        LIL C  SG + +AL+QF+LMR  E  PD++T+SMV+SIC  L+EL
Subjt:  LILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQEL

Q9SJG6 Pentatricopeptide repeat-containing protein At2g42920, chloroplastic1.1e-3029.75Show/hide
Query:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT
        Y S+ +    +G   + + +H  ++K GL+ ++F+ N  L +Y   G + +  + F G+   ++++WN  + G  + G +D  ++LFD MP+R+ VSWN+
Subjt:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT

Query:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW
        MISG+V +G  K A+ +  EMQ    +P  +T   LL   + + ++  G+ +H  ++R+  +++S+V+  +LIDMY K G ++    +F    K  +  W
Subjt:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW

Query:  NSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC
        NS+ILG   +GF   A++ F  +  +   PD  +   V++ C
Subjt:  NSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC

Arabidopsis top hitse value%identityAlignment
AT1G09190.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.9e-3130.4Show/hide
Query:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT
        Y+ L++ C  +  +   K +H +L++ G      +    ++LYT  G + D  K FD + ++N++ WN+ ++G    GDV+   HLF  M ER IVSWN+
Subjt:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT

Query:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSS---AFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW
        MIS     G  + A+ +  EM + GF P E T   +L + +S      GK +H +   SG+    + +GN+L+D Y K G ++    IF  M++ +V+SW
Subjt:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSS---AFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW

Query:  NSLILGCHRSGFRVLALNQF-FLMRTTEHSPDQFTISMVISICCCLQELE
        N+LI G   +G     ++ F  ++   + +P++ T   V++ C    ++E
Subjt:  NSLILGCHRSGFRVLALNQF-FLMRTTEHSPDQFTISMVISICCCLQELE

AT1G43980.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.3e-6650.41Show/hide
Query:  HYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWN
        ++S L+ + L+  S   AK +HAQLL+ G    T+ GN CLQLY   G V + L+ FD I DKN I+WN+CLKG+F+ G ++    LFD MPERD+VSWN
Subjt:  HYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWN

Query:  TMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNS
        TMISG VS GF +  + +  +MQ    RP+E+TFSIL SLV+   HG+Q+HG+ I SGV   ++V+ NS++DMY ++G+ DY   +F +ME  DV+SWN 
Subjt:  TMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNS

Query:  LILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQEL
        LIL C  SG + +AL+QF+LMR  E  PD++T+SMV+SIC  L+EL
Subjt:  LILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQEL

AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein7.7e-3229.75Show/hide
Query:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT
        Y S+ +    +G   + + +H  ++K GL+ ++F+ N  L +Y   G + +  + F G+   ++++WN  + G  + G +D  ++LFD MP+R+ VSWN+
Subjt:  YSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNT

Query:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW
        MISG+V +G  K A+ +  EMQ    +P  +T   LL   + + ++  G+ +H  ++R+  +++S+V+  +LIDMY K G ++    +F    K  +  W
Subjt:  MISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISW

Query:  NSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC
        NS+ILG   +GF   A++ F  +  +   PD  +   V++ C
Subjt:  NSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISIC

AT4G20770.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-3033.92Show/hide
Query:  NAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAM
        + K IH  ++++G+ S+T+L N  L LY   G      K FD +  +++ SWN  L    + GD+     +FD MPERD+VSWN MIS  V  GF + A+
Subjt:  NAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPERDIVSWNTMISGYVSSGFAKSAM

Query:  GISLEMQNAGFRPSEYTFSILLSLVSSAF---HGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVG-LVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRV
         +   M   GF PS +T + +LS  S       G + HG  +++G+D  ++ +GN+L+ MY K G +VDY   +F S+ + + +S+ ++I G  R    +
Subjt:  GISLEMQNAGFRPSEYTFSILLSLVSSAF---HGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVG-LVDYMFVIFSSMEKVDVISWNSLILGCHRSGFRV

Query:  LALNQFFLMRTTEHSPDQFTISMVISI
         A+  F LM       D   +S ++SI
Subjt:  LALNQFFLMRTTEHSPDQFTISMVISI

AT4G37170.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-3131.82Show/hide
Query:  KLLG-AHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLF
        +LLG A K   S Y +LI+ C    ++   K +H  +   G      + N  L++Y   G + D  K FD + ++++ SWN+ + G    G ++  R LF
Subjt:  KLLG-AHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLF

Query:  DVMPERDIVSWNTMISGYVSSGFAKSAMGI-SLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMF
        D M E+D  SW  M++GYV     + A+ + SL  +    RP+ +T SI +   + V     GK++HG ++R+G+D S  VL +SL+DMYGK G +D   
Subjt:  DVMPERDIVSWNTMISGYVSSGFAKSAMGI-SLEMQNAGFRPSEYTFSILL---SLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMF

Query:  VIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL
         IF  + + DV+SW S+I    +S       + F  +  +   P+++T + V++ C  L   EL
Subjt:  VIFSSMEKVDVISWNSLILGCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCTCCAGCTAAATAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATACGCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAAC
AATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTATATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCAT
TTGATGGGATTAAAGATAAGAATATTATATCCTGGAATATATGCTTGAAGGGTATGTTTAGATTTGGCGACGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAG
AGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGGGCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAG
TGAGTATACCTTCTCCATTTTGCTTTCACTTGTGTCGTCTGCTTTTCATGGTAAGCAAGTTCATGGCAGTATGATACGTAGTGGTGTGGATGTATCAAGTATGGTGCTTG
GGAATTCATTGATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGTCATATTTTCTAGTATGGAAAAGGTGGATGTTATCTCTTGGAATTCTTTGATTTTA
GGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACTCACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTG
CTGTTGCCTCCAAGAGTTGGAACTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
GGTTATTTCCGACCATTTCCTCAATCCCCTTCGCTCACAGCCAAACGACCGCCGCCAAATCCGCCACCACTTCAATCCTCGAACACTTGAAAGAGGGTCGCTTCCGAAGA
GCTGTCTTATCCTGTTTGATTTCCCATTTCCCTTTCTACATCCTCTCTACTCTCCATTCTCCCAAATTTGCTCTTCCACTCGGCCCCACTCAAGAGTCGCCATTGTCTAC
TTCACCCAAGTTCCGTTCTTCATAGCACAACCGTACTTATATGCACCTCCAGCTAAATAAACTTCTTGGTGCGCACAAGGCTTTGCTTTCTCATTACTCTTCTCTGATAC
GCCAGTGTTTAGTTGTTGGATCTGTTCACAATGCCAAAACAATCCACGCTCAATTGCTAAAGCTTGGCCTTGACAGCAATACTTTTCTGGGCAATCATTGTCTTCAGCTA
TATACGCTATTTGGTCCTGTCCATGACGTATTGAAAGCATTTGATGGGATTAAAGATAAGAATATTATATCCTGGAATATATGCTTGAAGGGTATGTTTAGATTTGGCGA
CGTCGATGCTCCCCGTCACCTGTTCGATGTAATGCCTGAGAGGGACATTGTTTCTTGGAACACTATGATTTCTGGCTACGTTTCATCTGGATTTGCTAAGAGTGCAATGG
GCATTTCTCTGGAAATGCAAAATGCTGGTTTTAGACCAAGTGAGTATACCTTCTCCATTTTGCTTTCACTTGTGTCGTCTGCTTTTCATGGTAAGCAAGTTCATGGCAGT
ATGATACGTAGTGGTGTGGATGTATCAAGTATGGTGCTTGGGAATTCATTGATTGATATGTATGGAAAAGTTGGCCTTGTTGATTATATGTTTGTCATATTTTCTAGTAT
GGAAAAGGTGGATGTTATCTCTTGGAATTCTTTGATTTTAGGCTGTCATAGATCAGGCTTTAGAGTATTGGCACTCAATCAGTTCTTTCTAATGAGAACCACTGAGCACT
CACCTGATCAGTTCACTATATCAATGGTGATCAGTATCTGCTGTTGCCTCCAAGAGTTGGAACTGGTTTGAAGGTTGCAGTGCAGCTTTTTGAAGATACCAATCAATTGG
ATCCAGTTCTTTGTAATGTCATGATCTCAAGTTTTGCATGGCATGGTCATTGGAGGGATTCCATGTGGCTTTTTGTGTATACCTTAAGAGAGAACCTTGGGCCAATTGAC
ACTACACTGAGCAGTGTGCTGAGCTCCGTTTCAGTTTTCACACCTGTGGAGTTGGGCAGTCAAATTCATAATTTGGTTCTTAAGTTAGGTTTTGAGTTTGATGTCATTGT
GGCTAGTTCGCTGGTAGACATGTATGCTAAAGTTGGATCAATTGATGATGCCATGAAAGTCTTTATAGATATGCCCTTTAGAGATTTGATATCTTGGAACACTATGATTA
TGGGTCTGGTTGACAATGGTAAATACTTTGAGGCCCTACACACTTTTAATAAATTGGTCATGGAAGGTGTACTGCCAGATAGGATAACACTAGCCGGAGTCTTATTAGCT
TGCAGTTATGCTGGTTTTGTTGAGGAAGGGTTAGGCATCTTCTCTACAATGACATATGAACATGGAGTTGTGCCAAGCAATGAACATTATTCTTGTGTTGTGAACTTGCT
GAGTCGGGCTGGTAAATTTGAAGAAGCAGTTAATATTATCAAAACAACACCGTACCAACCTACTTCTACATTTTGGACGTCACTTCTTGGTGTTTGTGCAATTCATGGAG
ACCTAAAAATCATTGAAAAAGTTGCAGAGTGGGTGATGAAGCTGGAACCACAATCATCCCTACCATATTCAGTGCTGGCTCAAGCATATGCGATAAGATGTCAATGGGAA
AGCATGGTTCGTGTCAAGAATACTTGGGAGAATATAGCTGCACAAAAGGTGAAGGCTTGCAGCTGGATTGTGACAAAAGATTGTGCGTATGCTTTCGAGGATGACCAATT
ACAGCTTCTGTTGAGAAAAAATTTCATTTCAGTGTTGGAATTAATTATCTGGGAGATTGAATATGGGATTGACTATGAACAGTATCTGGAAATAATACATTAAAATTGTT
TTGTGATATTGATTATGTGAACCTCAAATTTATCGAATTCTTAATACCCAAGGGCCAACATCTCAATCTTTGGGGTTGTGGACTCTCTGACAATCACACTGAACGGATGC
TCCCAGACTGTTCTTAGGAACTTGTGGATGAGACATGGTAAACGTATTGTGCTTGGAATCCTTCATAGAGTGCCTCATTGGATTAAGTTTTTTCTGGATTTGAAGATACT
GTTTCCTCTTTGGTGCAAATCTGATGCCCTGTTAAGAGATTAGCAGCTTTGTTTTGATGTTCAGCGACTATTCTCTTTGCATTTGTGTGGGTTTGCAATGGTGGGATACC
AATTGAAAGCATTTGCAGTGACGTTTGCTGGAACTAACCTTTGTGCAATGGAAGATGAAGTTTGGAAGAAAACTGATACATACATATTCATGCTTCAAGAGACTGGAGAG
ACGTGAAGATGATTATCCAATTTTTGCTATTGGCCACTGAAGAGCAATTCATGTTTAAGAGCTCAACGTGAAGAAGATAGGGTCTTGATCTACCCAGCATATTGAATCAA
TCTTATAATCCTCATCAAGTCAAGCCATTCACTAACTAAGCTGCCAAGACGTGCTTAGTGGAATTGTAGTGAGTTCATTGAGGTGCTGTAAATGGGTTCATAGCATGCTG
GAAGAAGGATAATCTGTGTTCTGTAATTCCAACACTACAACAAACTTGGTGATACTTTGTGTTTCTACTTGAAGGGTGAGGGGATTTAGTTTTAGTTGCCTTTGTTGGTA
CATAGCACAACCCACTGATTATTTATTCTTTGACATAAATATTCATAAATTATATGATATGATTCTAATTGAAAATAGGGCAAGAACTGACCATACAATTGACAAATATT
CTGATGATCAATAGGTCACTTTGGTGCTAATAACTTTGTAGAAATGATACTGTAGTGTGTGAAAGATCGTATTGTATAAAAAAATCTTATTGATGCATATATCATTATAT
CCTATTTCTATTC
Protein sequenceShow/hide protein sequence
MHLQLNKLLGAHKALLSHYSSLIRQCLVVGSVHNAKTIHAQLLKLGLDSNTFLGNHCLQLYTLFGPVHDVLKAFDGIKDKNIISWNICLKGMFRFGDVDAPRHLFDVMPE
RDIVSWNTMISGYVSSGFAKSAMGISLEMQNAGFRPSEYTFSILLSLVSSAFHGKQVHGSMIRSGVDVSSMVLGNSLIDMYGKVGLVDYMFVIFSSMEKVDVISWNSLIL
GCHRSGFRVLALNQFFLMRTTEHSPDQFTISMVISICCCLQELELV