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MELO.jh005751.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh005751.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrotransposon gag protein
Genome locationchr03:20527649..20528089
RNA-Seq ExpressionMELO.jh005751.1
SyntenyMELO.jh005751.1
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031630.1 hypothetical protein E6C27_scaffold139G003990 [Cucumis melo var. makuwa]7.41e-1575.51Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVD-HHLQYRPSKR
        MLQPRRSSSQICCNREDRHLKYVTVEKIIISNML  ++  HL+   +K+
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVD-HHLQYRPSKR

KAA0035946.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.52e-1153.45Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVDHHLQYRPSKRSFISNVLQLR
        ML PRR SSQICC+RE R LKYV  EK+++SNM  R    L+Y  +++  +SN+LQ R
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVDHHLQYRPSKRSFISNVLQLR

KAA0059585.1 uncharacterized protein E6C27_scaffold54G00040 [Cucumis melo var. makuwa]2.13e-1252.17Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYR-----------VDHHLQYRPSKRSFISNVLQLR
        MLQPRRSS QICCNRE  HLKYV VEK+++S+ML R               L Y  +++ F+SN+LQLR
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYR-----------VDHHLQYRPSKRSFISNVLQLR

KAA0060518.1 hypothetical protein E6C27_scaffold22G003700 [Cucumis melo var. makuwa]1.36e-1156.67Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY--RVDHHLQYRPSKRSFISNVLQLR
        MLQ RRSSSQICC+RE R LKYV VEK+++SNML   +   HL+Y  +++  +SN+LQ R
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY--RVDHHLQYRPSKRSFISNVLQLR

TYK13543.1 hypothetical protein E5676_scaffold299G00180 [Cucumis melo var. makuwa]2.47e-1261.82Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY-RVDHHLQYRPSKRSFISNV
        +LQPRRSSS ICC++ED HL+YV VEK++ISN+L  R DHHLQY       ISN+
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY-RVDHHLQYRPSKRSFISNV

TrEMBL top hitse value%identityAlignment
A0A5A7T154 Ty3-gypsy retrotransposon protein1.70e-1153.45Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVDHHLQYRPSKRSFISNVLQLR
        ML PRR SSQICC+RE R LKYV  EK+++SNM  R    L+Y  +++  +SN+LQ R
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVDHHLQYRPSKRSFISNVLQLR

A0A5A7V172 Uncharacterized protein1.03e-1252.17Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYR-----------VDHHLQYRPSKRSFISNVLQLR
        MLQPRRSS QICCNRE  HLKYV VEK+++S+ML R               L Y  +++ F+SN+LQLR
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYR-----------VDHHLQYRPSKRSFISNVLQLR

A0A5D3BNW3 Uncharacterized protein6.59e-1256.67Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY--RVDHHLQYRPSKRSFISNVLQLR
        MLQ RRSSSQICC+RE R LKYV VEK+++SNML   +   HL+Y  +++  +SN+LQ R
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY--RVDHHLQYRPSKRSFISNVLQLR

A0A5D3BZN7 Uncharacterized protein3.59e-1575.51Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVD-HHLQYRPSKR
        MLQPRRSSSQICCNREDRHLKYVTVEKIIISNML  ++  HL+   +K+
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVD-HHLQYRPSKR

A0A5D3CNR5 Uncharacterized protein1.20e-1261.82Show/hide
Query:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY-RVDHHLQYRPSKRSFISNV
        +LQPRRSSS ICC++ED HL+YV VEK++ISN+L  R DHHLQY       ISN+
Subjt:  MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLY-RVDHHLQYRPSKRSFISNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAACCGAGAAGATCGTCATCTCAAATATGTTGCAACCGAGAAGATCGTCATCTCAAATATGTTACAGTCGAGAAAATCATCATCTCAAATATGTTATATCGAGT
GGATCATCATCTCCAATATCGACCATCGAAAAGATCATTCATCTCTAATGTGTTGCAGCTCCGAGCATGA
mRNA sequenceShow/hide mRNA sequence
TCGAGAAGATCATCATCTCAAATATGTTGCAACCGAGAAGATCGTCATCTCAAATATGTTGCAACCGAGAAGATCGTCATCTCAAATATGTTACAGTCGAGAAAATCATC
ATCTCAAATATGTTATATCGAGTGGATCATCATCTCCAATATCGACCATCGAAAAGATCATTCATCTCTAATGTGTTGCAGCTCCGAGCATGATAAGGATAGTACATCTT
AGTCTCCAACTCTCCAAATGATGATGGTACAACTTTGAGAGAATGACAATGGTGCAGCTCTACCTTCGCCTCTCCAAGATGACAACGACGGTGCAACTTCACTTCCACCT
CTTCAAAGATGATGATGATGAAGCAACTCTACCTTCGCCTCTCTAA
Protein sequenceShow/hide protein sequence
MLQPRRSSSQICCNREDRHLKYVTVEKIIISNMLYRVDHHLQYRPSKRSFISNVLQLRA