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MELO.jh024123.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh024123.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCoatomer, beta' subunit
Genome locationchr11:10373859..10374775
RNA-Seq ExpressionMELO.jh024123.1
SyntenyMELO.jh024123.1
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030117 - membrane coat (cellular component)
GO:0030663 - COPI-coated vesicle membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043419.1 coatomer subunit beta'-2-like isoform X3 [Cucumis melo var. makuwa]6.26e-48100Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

KAA0043450.1 coatomer subunit beta'-2-like isoform X3 [Cucumis melo var. makuwa]4.44e-48100Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

KAA0067006.1 coatomer subunit beta'-2-like [Cucumis melo var. makuwa]3.12e-4698.7Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYP
        MKSSRRVVI YDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYP
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYP

TYK24231.1 coatomer subunit beta'-2-like [Cucumis melo var. makuwa]1.11e-46100Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

TYK26242.1 coatomer subunit beta'-2-like isoform X3 [Cucumis melo var. makuwa]1.01e-4698.72Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVI YDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

TrEMBL top hitse value%identityAlignment
A0A5A7TJJ7 Coatomer subunit beta'-2-like isoform X32.15e-48100Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

A0A5A7TQE0 Coatomer subunit beta'-2-like isoform X33.03e-48100Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

A0A5A7VKP7 Coatomer subunit beta'-2-like1.51e-4698.7Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYP
        MKSSRRVVI YDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYP
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYP

A0A5D3DKU3 Coatomer subunit beta'-2-like5.37e-47100Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

A0A5D3DRX8 Coatomer subunit beta'-2-like isoform X34.88e-4798.72Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MKSSRRVVI YDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

SwissProt top hitse value%identityAlignment
Q5VQ78 Coatomer subunit beta'-17.2e-3484.62Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MK SRR+VIGYDEGTIM+K+GR+VP+ASMD  GKIIWAKHNEIQTVNIK+VGA FEVTDGERLPLAVKE+G+CDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

Q6H8D5 Coatomer subunit beta'-22.1e-3382.05Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        MK SRRVVIGYDEGTIM+K+GR+VP+ASMD+ GKIIW+KHNEIQTVNIK++GAD E+ DGERLPLAVKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

Q8L828 Coatomer subunit beta'-31.2e-3383.33Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMD+ GKIIWAKHNEIQT NIKS+GA +E TDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

Q9C827 Coatomer subunit beta'-22.9e-3587.18Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMDN GKIIWAKHNEIQT NIKS+GAD+EVTDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

Q9CAA0 Coatomer subunit beta'-13.6e-3387.18Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +K SRRVVIGYDEG+IMVKLGR++P+ASMDN GKIIWAKHNEI TVNIKSVGAD EVTDGERLPLAVKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

Arabidopsis top hitse value%identityAlignment
AT1G52360.1 Coatomer, beta' subunit2.1e-3687.18Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMDN GKIIWAKHNEIQT NIKS+GAD+EVTDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

AT1G52360.2 Coatomer, beta' subunit2.1e-3687.18Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMDN GKIIWAKHNEIQT NIKS+GAD+EVTDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

AT3G15980.1 Coatomer, beta' subunit8.8e-3583.33Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMD+ GKIIWAKHNEIQT NIKS+GA +E TDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

AT3G15980.2 Coatomer, beta' subunit8.8e-3583.33Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMD+ GKIIWAKHNEIQT NIKS+GA +E TDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ

AT3G15980.3 Coatomer, beta' subunit8.8e-3583.33Show/hide
Query:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ
        +KSSRRVVIGYDEGTIMVKLGR++P+ASMD+ GKIIWAKHNEIQT NIKS+GA +E TDGERLPL+VKE+GTCDLYPQ
Subjt:  MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGCTCACGCCGGGTTGTGATTGGTTATGATGAAGGAACTATTATGGTAAAACTTGGCCGGAAAGTACCTATTGCAAGTATGGACAATGGTGGAAAGATAATATG
GGCTAAGCATAATGAAATTCAAACAGTAAACATCAAAAGTGTGGGAGCAGACTTTGAGGTTACTGATGGAGAGAGATTGCCTTTAGCTGTTAAGGAGATGGGAACTTGTG
ATCTTTATCCTCAAGTAAGTTATTTTACATCTGTGTTTGAATTCTCTGTATATTTTGTCATGAATTGGCTGGAGCTATTCCTTTATCTTATAAAAAACCTTTGA
mRNA sequenceShow/hide mRNA sequence
TGCTTGTTTTTCTTTTTGAGACAGACGACTTGGTCTGTTATGGGCTGTCAGTTGCTTTTCGTTAATATATTTTGTTACTTTTTGTATCTATATTTTGTGGAATTCTGTCT
GCTTCATTGGCATTTCCACTAGTTGTAATTATTTCTGATTTACAGGCTTGAAAATACATTAAATTATGGCCTTGAACGAGTTTGGGCAATTGGATACATGAAGAGCTCAC
GCCGGGTTGTGATTGGTTATGATGAAGGAACTATTATGGTAAAACTTGGCCGGAAAGTACCTATTGCAAGTATGGACAATGGTGGAAAGATAATATGGGCTAAGCATAAT
GAAATTCAAACAGTAAACATCAAAAGTGTGGGAGCAGACTTTGAGGTTACTGATGGAGAGAGATTGCCTTTAGCTGTTAAGGAGATGGGAACTTGTGATCTTTATCCTCA
AGTAAGTTATTTTACATCTGTGTTTGAATTCTCTGTATATTTTGTCATGAATTGGCTGGAGCTATTCCTTTATCTTATAAAAAACCTTTGATTGTAGCCTCCAGTGATAT
TT
Protein sequenceShow/hide protein sequence
MKSSRRVVIGYDEGTIMVKLGRKVPIASMDNGGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQVSYFTSVFEFSVYFVMNWLELFLYLIKNL