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MELO.jh032202.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh032202.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrotransposon protein
Genome locationchr11:10997581..10997766
RNA-Seq ExpressionMELO.jh032202.1
SyntenyMELO.jh032202.1
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036555.1 retrotransposon protein [Cucumis melo var. makuwa]8.41e-0875Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSR PKH WTKEE+A+ +ECLVELVN  G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
KAA0049712.1 retrotransposon protein [Cucumis melo var. makuwa]9.83e-0875Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSRAPKH+WTKEE+ T VECLV+LV+ +G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
KAA0066605.1 retrotransposon protein [Cucumis melo var. makuwa]4.80e-0878.12Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSRAPKH WTKEE+A  VECLVELV+  G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
TYK24214.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-1396.88Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSRAP HLWTKEEDATFVECLVELVNNDG
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
XP_031739738.1 uncharacterized protein LOC116403265 [Cucumis sativus]8.11e-0875Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        M SSSRAPKH+WTKEE+AT VEC+VELV+  G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
TrEMBL top hitse value%identityAlignment
A0A5A7T527 Retrotransposon protein4.07e-0875Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSR PKH WTKEE+A+ +ECLVELVN  G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
A0A5A7U1Q2 Retrotransposon protein4.76e-0875Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSRAPKH+WTKEE+ T VECLV+LV+ +G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
A0A5D3CC64 Retrotransposon protein7.01e-0871.88Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        M SSSR PKH WTKEE+A+ +ECLVELVN  G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
A0A5D3CQS4 Retrotransposon protein2.32e-0878.12Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSRAPKH WTKEE+A  VECLVELV+  G
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
A0A5D3DKT3 Retrotransposon protein1.10e-1396.88Show/hide
Query:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
        MASSSRAP HLWTKEEDATFVECLVELVNNDG
Subjt:  MASSSRAPKHLWTKEEDATFVECLVELVNNDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCATCAAGGGCCCCTAAGCACTTATGGACAAAAGAGGAGGACGCAACCTTCGTGGAATGCCTGGTGGAGTTGGTCAACAACGATGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCATCAAGGGCCCCTAAGCACTTATGGACAAAAGAGGAGGACGCAACCTTCGTGGAATGCCTGGTGGAGTTGGTCAACAACGATGGTTAGCGATCCGACAA
TGGGACCTTTAGACCTGAGTACCATAGTCAGCTTGCAAGAATGATGGCTCAGAAGATGCCAGGTTGTAACATATAG
Protein sequenceShow/hide protein sequence
MASSSRAPKHLWTKEEDATFVECLVELVNNDG