| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.32e-226 | 68.57 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL E QIIIPDDG+EDPLTYKQ MN VD DQWIKAM+LEMESMY N VWTLVD PS+V+PIGCKWIYKRKRDQAGKVQTFKARLV KGYTQ+EG+
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFY+YEIWQMDVKT FLNGNLEESIYMVQPEGFI + QEQKVCKLQ SIYGLKQASRSWNIRFDT IKSYGFEQNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
PCVYK+I+NS VAFL+LY DDILLIGNDV
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
Query: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
V IV+RYQSN GRDHWTAVKNILKYLRRT++YMLVYG+KDLILTGYTDSDFQ+DKDAR
Subjt: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
Query: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
KSTSGS+FTLNGGAV+WRS+KQ+CIADSTMEAEYVA CEAAKEAVWL+KF TDLEVVPNMHLPITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
Query: HRGDVIVTK
HRGDV+VT+
Subjt: HRGDVIVTK
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| KAA0025159.1 gag/pol protein [Cucumis melo var. makuwa] | 2.33e-229 | 71.73 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL+E Q +IPDDG+EDPL+YKQ MN VD DQW+KAMDLEMESMY N VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLV KGYTQRE +
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFYDYEIWQMDVKT FLNGNLEESI+M +PEGFI +GQEQKVCKL SIYGLKQAS+SWNIRFD IKSYGF+QNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-------------------------------------------------------VEIVNRYQSNLGRDHW
PC+YK+I VAFLVLY DDIL IGND+ V IV+RYQSN G DHW
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-------------------------------------------------------VEIVNRYQSNLGRDHW
Query: TAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVP
TAVK ILKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD+RKST GS+FTLNGGAV+WRSIKQ CIADSTMEAEYVA CEA KEAVWL+KF DLEVVP
Subjt: TAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVP
Query: NMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
NM+LPITLY DNS AVANS+EPRSHKRGKHIERKYHLIREIV RGD IVTKI+S+ N+ADPFTK LTAK G L +L +R
Subjt: NMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 8.87e-228 | 66.05 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL+E Q++IPDDG+EDPL+YKQ MN VD DQW+KAMDLEMESMY N VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLV KGYTQREG+
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFYDYEIWQMDVKT FLNGNLEESI+M QPEGFI +GQEQKVCKL SIYGLKQASRSWNIRFDT IKSYGF+QNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
PCVYK+I VAFLVLY DDILLIGNDV
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
Query: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
V IV+RYQSN G DHWTAVK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD+R
Subjt: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
Query: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
KSTSGS+FTLNGGAV+WRSIKQ CIADSTMEAEYVA CEAAKEAVWL+KF DLEVVPNM+LPITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
Query: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
RGDVIVTKI+S+ N+ADPFTK LTAK G L +L +R
Subjt: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 9.24e-226 | 66.05 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL+E Q++IPDDG+EDPL+YKQ MN VD DQW+KAMDLEMESMY N VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLV KGYTQREG+
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFYDYEIWQMDVKT FLNGNLEESI+M QPEGFI +GQEQKVCKL SIYGLKQASRSWNIRFDT IKSYGF+QNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
PCVYK+I VAFLVLY DDILLIGNDV
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
Query: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
V IV+RYQSN G DHWTAVK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD+R
Subjt: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
Query: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
KSTSGS+FTLNGGAV+WRSIKQ CIADSTMEAEYVA CEAAKEAVWL+KF DLEVVPNM+LPITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
Query: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
RGDVIVTKI+S+ N+ADPFTK LTAK G L +L +R
Subjt: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 1.91e-226 | 68.6 | Show/hide |
Query: DRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGID
DRYLGLSEAQIIIPDDGIEDPLTYK MN VD DQWIKAMDLEMESMYSN VWTLVDQP++V+PIGCKWIYKRKRDQAGKVQTFKARLV KGYTQ+EGID
Subjt: DRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGID
Query: YEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEP
YEE FS AMIKSIRILLSI TFYDYEIWQMDVKTTFLN NLEESIYMVQPE FIQKGQEQK+CKLQ SIYGLKQASRS NIRFDT IKSYG EQNVDEP
Subjt: YEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEP
Query: CVYKRIINSTVAFLVLYGDDILLIGNDV------------------------------------------------------------------------
CVYKRI+NSTVAFLVLY DDILLIGNDV
Subjt: CVYKRIINSTVAFLVLYGDDILLIGNDV------------------------------------------------------------------------
Query: -----------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARK
V IV+R QS GRDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTD FQTDKDARK
Subjt: -----------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARK
Query: STSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVH
STSG +FT+NGGAV+WRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKF TDLEVVPNMHLP TLYCDNSGAV NSREPRSHKRGKHIERK LIR+IVH
Subjt: STSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVH
Query: RGDVIVTKISSKQNVA
+G V VTKIS +Q ++
Subjt: RGDVIVTKISSKQNVA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SIN2 Gag/pol protein | 1.13e-229 | 71.73 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL+E Q +IPDDG+EDPL+YKQ MN VD DQW+KAMDLEMESMY N VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLV KGYTQRE +
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFYDYEIWQMDVKT FLNGNLEESI+M +PEGFI +GQEQKVCKL SIYGLKQAS+SWNIRFD IKSYGF+QNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-------------------------------------------------------VEIVNRYQSNLGRDHW
PC+YK+I VAFLVLY DDIL IGND+ V IV+RYQSN G DHW
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-------------------------------------------------------VEIVNRYQSNLGRDHW
Query: TAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVP
TAVK ILKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD+RKST GS+FTLNGGAV+WRSIKQ CIADSTMEAEYVA CEA KEAVWL+KF DLEVVP
Subjt: TAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVP
Query: NMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
NM+LPITLY DNS AVANS+EPRSHKRGKHIERKYHLIREIV RGD IVTKI+S+ N+ADPFTK LTAK G L +L +R
Subjt: NMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
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| A0A5A7TZD0 Gag/pol protein | 4.30e-228 | 66.05 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL+E Q++IPDDG+EDPL+YKQ MN VD DQW+KAMDLEMESMY N VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLV KGYTQREG+
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFYDYEIWQMDVKT FLNGNLEESI+M QPEGFI +GQEQKVCKL SIYGLKQASRSWNIRFDT IKSYGF+QNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
PCVYK+I VAFLVLY DDILLIGNDV
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
Query: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
V IV+RYQSN G DHWTAVK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD+R
Subjt: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
Query: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
KSTSGS+FTLNGGAV+WRSIKQ CIADSTMEAEYVA CEAAKEAVWL+KF DLEVVPNM+LPITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
Query: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
RGDVIVTKI+S+ N+ADPFTK LTAK G L +L +R
Subjt: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
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| A0A5A7UYE8 Gag/pol protein | 4.47e-226 | 66.05 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL+E Q++IPDDG+EDPL+YKQ MN VD DQW+KAMDLEMESMY N VW LVD P V+PIGCKWIYKRKRD AGKVQTFKARLV KGYTQREG+
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFYDYEIWQMDVKT FLNGNLEESI+M QPEGFI +GQEQKVCKL SIYGLKQASRSWNIRFDT IKSYGF+QNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
PCVYK+I VAFLVLY DDILLIGNDV
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
Query: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
V IV+RYQSN G DHWTAVK +LKYLRRT+DYMLVYG+KDLILTGYTDSDFQTDKD+R
Subjt: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
Query: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
KSTSGS+FTLNGGAV+WRSIKQ CIADSTMEAEYVA CEAAKEAVWL+KF DLEVVPNM+LPITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
Query: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
RGDVIVTKI+S+ N+ADPFTK LTAK G L +L +R
Subjt: HRGDVIVTKISSKQNVADPFTKALTAK---GVLLTLSIR
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| A0A5D3BX45 Gag/pol protein | 9.24e-227 | 68.6 | Show/hide |
Query: DRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGID
DRYLGLSEAQIIIPDDGIEDPLTYK MN VD DQWIKAMDLEMESMYSN VWTLVDQP++V+PIGCKWIYKRKRDQAGKVQTFKARLV KGYTQ+EGID
Subjt: DRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGID
Query: YEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEP
YEE FS AMIKSIRILLSI TFYDYEIWQMDVKTTFLN NLEESIYMVQPE FIQKGQEQK+CKLQ SIYGLKQASRS NIRFDT IKSYG EQNVDEP
Subjt: YEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEP
Query: CVYKRIINSTVAFLVLYGDDILLIGNDV------------------------------------------------------------------------
CVYKRI+NSTVAFLVLY DDILLIGNDV
Subjt: CVYKRIINSTVAFLVLYGDDILLIGNDV------------------------------------------------------------------------
Query: -----------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARK
V IV+R QS GRDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTD FQTDKDARK
Subjt: -----------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARK
Query: STSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVH
STSG +FT+NGGAV+WRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKF TDLEVVPNMHLP TLYCDNSGAV NSREPRSHKRGKHIERK LIR+IVH
Subjt: STSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVH
Query: RGDVIVTKISSKQNVA
+G V VTKIS +Q ++
Subjt: RGDVIVTKISSKQNVA
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| E2GK51 Gag/pol protein (Fragment) | 1.61e-226 | 68.57 | Show/hide |
Query: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
P+RYLGL E QIIIPDDG+EDPLTYKQ MN VD DQWIKAM+LEMESMY N VWTLVD PS+V+PIGCKWIYKRKRDQAGKVQTFKARLV KGYTQ+EG+
Subjt: PDRYLGLSEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGI
Query: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
DYEETFSPVAM+KSIRILLSI TFY+YEIWQMDVKT FLNGNLEESIYMVQPEGFI + QEQKVCKLQ SIYGLKQASRSWNIRFDT IKSYGFEQNVDE
Subjt: DYEETFSPVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDE
Query: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
PCVYK+I+NS VAFL+LY DDILLIGNDV
Subjt: PCVYKRIINSTVAFLVLYGDDILLIGNDV-----------------------------------------------------------------------
Query: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
V IV+RYQSN GRDHWTAVKNILKYLRRT++YMLVYG+KDLILTGYTDSDFQ+DKDAR
Subjt: ------------------------------------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDAR
Query: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
KSTSGS+FTLNGGAV+WRS+KQ+CIADSTMEAEYVA CEAAKEAVWL+KF TDLEVVPNMHLPITLYCDNSGAVANS+EPRSHKRGKHIERKYHLIREIV
Subjt: KSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIV
Query: HRGDVIVTK
HRGDV+VT+
Subjt: HRGDVIVTK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.8e-58 | 29.76 | Show/hide |
Query: PLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFSPVAMIKSIRILLSI
P ++ + D W +A++ E+ + N WT+ +P + +W++ K ++ G +KARLV +G+TQ+ IDYEETF+PVA I S R +LS+
Subjt: PLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFSPVAMIKSIRILLSI
Query: VTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVY---KRIINSTVAFLVLY
V Y+ ++ QMDVKT FLNG L+E IYM P+G VCKL +IYGLKQA+R W F+ +K F + + C+Y K IN + +++LY
Subjt: VTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVY---KRIINSTVAFLVLY
Query: GDDILLIGNDV-----------------------------------------------------------------------------------------
DD+++ D+
Subjt: GDDILLIGNDV-----------------------------------------------------------------------------------------
Query: ---------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSGSIFTL-NGGAVIWRSIKQ
V I++RY S + W +K +L+YL+ T D L++ K+L + GY DSD+ + RKST+G +F + + + W + +Q
Subjt: ---------------VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSGSIFTL-NGGAVIWRSIKQ
Query: SCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTK
+ +A S+ EAEY+A EA +EA+WLK T + + + PI +Y DN G ++ + P HKR KHI+ KYH RE V + + I ++ +AD FTK
Subjt: SCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTK
Query: ALTA
L A
Subjt: ALTA
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| P0CV72 Secreted RxLR effector protein 161 | 3.3e-17 | 44.34 | Show/hide |
Query: VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAA
V +++++ S+ HW A+K +L+YL+ T+ Y L + L GY+D+D+ D ++R+STSG +F LNGG V WRS KQ +A S+ E EY+A EA
Subjt: VEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAA
Query: KEAVWL
+EAVWL
Subjt: KEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.1e-83 | 35.52 | Show/hide |
Query: SEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFS
S ++I DD +P + K+ ++ + +Q +KAM EMES+ N + LV+ P RP+ CKW++K K+D K+ +KARLVVKG+ Q++GID++E FS
Subjt: SEAQIIIPDDGIEDPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLVDQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFS
Query: PVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVY-KR
PV + SIR +LS+ D E+ Q+DVKT FL+G+LEE IYM QPEGF G++ VCKL S+YGLKQA R W ++FD+ +KS + + +PCVY KR
Subjt: PVAMIKSIRILLSIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVY-KR
Query: IINSTVAFLVLYGDDILLIGND------------------------------------------------------------------------------
+ L+LY DD+L++G D
Subjt: IINSTVAFLVLYGDDILLIGND------------------------------------------------------------------------------
Query: -----------------------------------VVEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGS
V +V+R+ N G++HW AVK IL+YLR T L +G D IL GYTD+D D D RKS++G
Subjt: -----------------------------------VVEIVNRYQSNLGRDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGS
Query: IFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI
+FT +GGA+ W+S Q C+A ST EAEY+A E KE +WLK+F +L + ++ +YCD+ A+ S+ H R KHI+ +YH IRE+V +
Subjt: IFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVI
Query: VTKISSKQNVADPFTKAL
V KIS+ +N AD TK +
Subjt: VTKISSKQNVADPFTKAL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.8e-55 | 29.55 | Show/hide |
Query: DQWIKAMDLEMESMYSNYVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFSPVAMIKSIRILLSIVTFYDYEIWQMD
++W AM E+ + N+ W LV PS V +GC+WI+ +K + G + +KARLV KGY QR G+DY ETFSPV SIRI+L + + I Q+D
Subjt: DQWIKAMDLEMESMYSNYVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFSPVAMIKSIRILLSIVTFYDYEIWQMD
Query: VKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVYKRIINSTVAFLVLYGDDILLIGND-----
V FL G L + +YM QP GFI K + VCKL+ ++YGLKQA R+W + + + GF +V + ++ ++ ++++Y DDIL+ GND
Subjt: VKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVYKRIINSTVAFLVLYGDDILLIGND-----
Query: ----------------------------------------VVEIVNR--------------------------------YQSNLG---------------
+++++ R Y+ +G
Subjt: ----------------------------------------VVEIVNR--------------------------------YQSNLG---------------
Query: ------------RDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAA
+H A+K IL+YL T ++ + + L L Y+D+D+ DKD ST+G I L + W S KQ + S+ EAEY + +
Subjt: ------------RDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIADSTMEAEYVATCEAA
Query: KEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALT
E W+ T+L + + P +YCDN GA P H R KHI YH IR V G + V +S+ +AD TK L+
Subjt: KEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALT
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.1e-58 | 29.92 | Show/hide |
Query: DPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFSPVAMIKSIRILL
+P T Q M D+W +AM E+ + N+ W LV P V +GC+WI+ +K + G + +KARLV KGY QR G+DY ETFSPV SIRI+L
Subjt: DPLTYKQTMNGVDCDQWIKAMDLEMESMYSNYVWTLV-DQPSEVRPIGCKWIYKRKRDQAGKVQTFKARLVVKGYTQREGIDYEETFSPVAMIKSIRILL
Query: SIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVYKRIINSTVAFLVLYG
+ + I Q+DV FL G L + +YM QP GF+ K + VC+L+ +IYGLKQA R+W + T + + GF ++ + ++ ++ ++++Y
Subjt: SIVTFYDYEIWQMDVKTTFLNGNLEESIYMVQPEGFIQKGQEQKVCKLQISIYGLKQASRSWNIRFDTTIKSYGFEQNVDEPCVYKRIINSTVAFLVLYG
Query: DDILLIGNDVVEI---------------------------------------------------------------------------------------
DDIL+ GND V +
Subjt: DDILLIGNDVVEI---------------------------------------------------------------------------------------
Query: --------------VNR---YQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIAD
VNR Y DHW A+K +L+YL T D+ + + L L Y+D+D+ D D ST+G I L + W S KQ +
Subjt: --------------VNR---YQSNLGRDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSIFTLNGGAVIWRSIKQSCIAD
Query: STMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALT
S+ EAEY + + E W+ T+L + + P +YCDN GA P H R KHI YH IR V G + V +S+ +AD TK L+
Subjt: STMEAEYVATCEAAKEAVWLKKFSTDLEVVPNMHLPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTKISSKQNVADPFTKALT
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