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MELO.jh101810.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh101810.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description40S ribosomal protein S16
Genome locationchr06:11982629..11983846
RNA-Seq ExpressionMELO.jh101810.1
SyntenyMELO.jh101810.1
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000754 - Ribosomal protein S9
IPR014721 - Ribosomal protein S5 domain 2-type fold, subgroup
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR020574 - Ribosomal protein S9, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645860.1 hypothetical protein Csa_017052 [Cucumis sativus]4.10e-73100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

XP_004136973.1 40S ribosomal protein S16 [Cucumis sativus]8.07e-74100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

XP_022149351.1 40S ribosomal protein S16-like [Momordica charantia]1.15e-7399.11Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIEL+EPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

XP_022989000.1 40S ribosomal protein S16-like [Cucurbita maxima]2.31e-7399.11Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MA+PIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

XP_040987369.1 40S ribosomal protein S16 [Juglans microcarpa x Juglans regia]3.28e-7398.21Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAP+ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

TrEMBL top hitse value%identityAlignment
A0A0A0L6F6 Uncharacterized protein3.91e-74100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

A0A1S3C210 40S ribosomal protein S163.91e-74100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

A0A6J1D637 40S ribosomal protein S163.91e-74100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

A0A6J1FW85 40S ribosomal protein S16-like3.91e-74100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

A0A6J1J781 40S ribosomal protein S16-like3.91e-74100Show/hide
Query:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
        MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE
Subjt:  MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDE

Query:  QSKKEIKDILVR
        QSKKEIKDILVR
Subjt:  QSKKEIKDILVR

SwissProt top hitse value%identityAlignment
O22647 40S ribosomal protein S162.3e-4985.84Show/hide
Query:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVD
        MA P  ESVQCFGRKKTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRHRF GVDMRIRV+GGG TSQIYAIRQSIAKALVA+YQKYVD
Subjt:  MAAP-IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVD

Query:  EQSKKEIKDILVR
        EQ+KKE+KDIL+R
Subjt:  EQSKKEIKDILVR

P46293 40S ribosomal protein S161.7e-5296.26Show/hide
Query:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK
        IESVQCFGRKKTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK
Subjt:  IESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKK

Query:  EIKDILV
        EIKDILV
Subjt:  EIKDILV

Q42340 40S ribosomal protein S16-31.8e-4986.92Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDILVR
Subjt:  IKDILVR

Q9M8X9 40S ribosomal protein S16-21.4e-4682.24Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVDMRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDIL+R
Subjt:  IKDILVR

Q9SK22 40S ribosomal protein S16-11.4e-4987.85Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDILVR
Subjt:  IKDILVR

Arabidopsis top hitse value%identityAlignment
AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein9.6e-5187.85Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDILVR
Subjt:  IKDILVR

AT3G04230.1 Ribosomal protein S5 domain 2-like superfamily protein9.9e-4882.24Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRF+GVDMRIR  GGG+TS++YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDIL+R
Subjt:  IKDILVR

AT5G18380.1 Ribosomal protein S5 domain 2-like superfamily protein1.3e-5086.92Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDILVR
Subjt:  IKDILVR

AT5G18380.2 Ribosomal protein S5 domain 2-like superfamily protein5.6e-5172.66Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVRNHTVDRRVL------------GNYCGDFLVGV
        IKDILVR    DR +L             N+C   LVG+
Subjt:  IKDILVRNHTVDRRVL------------GNYCGDFLVGV

AT5G18380.3 Ribosomal protein S5 domain 2-like superfamily protein1.3e-5086.92Show/hide
Query:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE
        ESVQCFGRKKTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRF+GV+MRIRV GGGHTSQ+YAIRQSIAKALVA+YQKYVDEQSKKE
Subjt:  ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKE

Query:  IKDILVR
        IKDILVR
Subjt:  IKDILVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCCGATCGAATCGGTGCAATGTTTTGGACGTAAGAAGACGGCGGTTGCCGTCACCTACTGCAAGCGCGGCAGGGGCTTGATTAAGATCAATGGCTGCCCAAT
CGAGCTTGTTGAGCCAGAGATCTTGCGCTTCAAGGCCTACGAGCCCATCCTCCTCCTTGGACGTCACCGTTTCTCTGGTGTTGATATGCGCATCAGAGTGAAGGGTGGAG
GTCACACCTCCCAGATCTATGCCATCCGTCAGAGTATTGCCAAGGCTCTTGTTGCCTTCTACCAGAAATATGTGGATGAGCAGAGCAAGAAGGAGATTAAAGATATTCTG
GTCAGAAATCATACCGTTGATCGAAGAGTATTAGGGAACTACTGCGGAGACTTTTTAGTCGGTGTTGCCTTTTCTTTTCCTACTGCGAGGGATGGACAAGTTATGAATAT
GGTTTGGCATTGCCTCTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCCGATCGAATCGGTGCAATGTTTTGGACGTAAGAAGACGGCGGTTGCCGTCACCTACTGCAAGCGCGGCAGGGGCTTGATTAAGATCAATGGCTGCCCAAT
CGAGCTTGTTGAGCCAGAGATCTTGCGCTTCAAGGCCTACGAGCCCATCCTCCTCCTTGGACGTCACCGTTTCTCTGGTGTTGATATGCGCATCAGAGTGAAGGGTGGAG
GTCACACCTCCCAGATCTATGCCATCCGTCAGAGTATTGCCAAGGCTCTTGTTGCCTTCTACCAGAAATATGTGGATGAGCAGAGCAAGAAGGAGATTAAAGATATTCTG
GTCAGAAATCATACCGTTGATCGAAGAGTATTAGGGAACTACTGCGGAGACTTTTTAGTCGGTGTTGCCTTTTCTTTTCCTACTGCGAGGGATGGACAAGTTATGAATAT
GGTTTGGCATTGCCTCTTGGTTTGA
Protein sequenceShow/hide protein sequence
MAAPIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDIL
VRNHTVDRRVLGNYCGDFLVGVAFSFPTARDGQVMNMVWHCLLV