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MELO.jh102004.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh102004.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionReverse transcriptase
Genome locationchr07:9622638..9624322
RNA-Seq ExpressionMELO.jh102004.1
SyntenyMELO.jh102004.1
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001969 - Aspartic peptidase, active site
IPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025242.1 pol protein [Cucumis melo var. makuwa]8.03e-27278.31Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA      + AEAAPAQAQAAPVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

KAA0025848.1 pol protein [Cucumis melo var. makuwa]3.19e-27178.13Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA      + AEAAPAQAQAAPVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

KAA0040651.1 gag protease polyprotein [Cucumis melo var. makuwa]5.74e-27575.84Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRG RRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA                   PVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS-PE---SRAAKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS PE   S  A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS-PE---SRAAKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVD+RE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

KAA0053272.1 gag protease polyprotein [Cucumis melo var. makuwa]2.66e-27175.66Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRG RRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA                   PVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDC+GKEVVFNPPSEASFKFR AGMVCIPKVISAMKASKLLSQGTWGILASVVD+RE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

TYJ95850.1 pol protein [Cucumis melo var. makuwa]8.03e-27278.31Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA      + AEAAPAQAQAAPVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

TrEMBL top hitse value%identityAlignment
A0A5A7TG66 Gag protease polyprotein2.78e-27575.84Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRG RRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA                   PVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS-PE---SRAAKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS PE   S  A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS-PE---SRAAKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDC+GKEVVFNPPS ASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVD+RE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

A0A5A7TSL0 Reverse transcriptase3.89e-27278.31Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA      + AEAAPAQAQAAPVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

A0A5A7UBS1 Reverse transcriptase1.55e-27178.13Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA      + AEAAPAQAQAAPVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLS EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

A0A5A7UC03 Gag protease polyprotein1.29e-27175.66Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRG RRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA                   PVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDC+GKEVVFNPPSEASFKFR AGMVCIPKVISAMKASKLLSQGTWGILASVVD+RE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

A0A5D3CQB5 Reverse transcriptase3.89e-27278.31Show/hide
Query:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA
        MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRY+DM QAA   FL   QNQAA      + AEAAPAQAQAAPVQAQAVAPPA
Subjt:  MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWR-FLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPA

Query:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
        PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY
Subjt:  PEEAQPVPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFY

Query:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR
        AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLS   RA    A GR  
Subjt:  AKFFSANVKHAKLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRA----AKGRQR

Query:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------
          G KRK E  P                              LP                                                        
Subjt:  VTGTKRKGEFSP------------------------------LP--------------------------------------------------------

Query:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
           EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVF+QHVGLEVEPLGSVL VSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG
Subjt:  ---EAERAGTVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILG

Query:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
        MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE
Subjt:  MDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVRE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCACGTAGAGGTACACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGTTGCACCGGCAGTCGACCCAAAC
GCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCGGGACATGCCGCAAGCCGCTTGGCGCTTTTTGCCGCCCAGCCAGAACCAGGCCGCCTGT
TCAGCCGAGGCCGCCCTGTCAGCCGAGGCCGCCCCTGCTCAGGCCCAGGCCGCCCCTGTTCAGGCTCAGGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCA
GTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGATTTCAGGAAGTATAATCCCAAGACCTTTGACGGATCCATGGACAACCCCACAAAGGCCCAAATG
TGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGG
GAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTTCTCCGCCAATGTGAAGCACGCC
AAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGAT
GAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCA
CTGGATTTGAGCCCCGAGAGCCGAGCCGCTAAGGGCCGGCAGAGGGTCACTGGGACGAAGAGAAAGGGAGAGTTTTCGCCACTACCCGAGGCCGAGCGAGCCGGC
ACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCATTCAGCATGTG
GGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGCCGGTTTCTACTCCATCTGGGGAGGTCTTGTTATCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCG
AATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTAT
GGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAA
CTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCGCCACGTAGAGGTACACGCCGAGGAGGTGGTAGGGGAGGCAGAGGAGCCGGTCGTGGCCAGCCGGAGGCGCCACCTGTTGCACCGGCAGTCGACCCAAAC
GCACCGGTCACCCAGGCGGATCTCGCCGCGATGGAGCAGCGTTATCGGGACATGCCGCAAGCCGCTTGGCGCTTTTTGCCGCCCAGCCAGAACCAGGCCGCCTGT
TCAGCCGAGGCCGCCCTGTCAGCCGAGGCCGCCCCTGCTCAGGCCCAGGCCGCCCCTGTTCAGGCTCAGGCCGTCGCTCCTCCAGCCCCTGAGGAAGCTCAACCA
GTACCAGTTCAACTGTCGGCCGAGGCGAAACACTTACGGGATTTCAGGAAGTATAATCCCAAGACCTTTGACGGATCCATGGACAACCCCACAAAGGCCCAAATG
TGGTTGACGTCCATAGAGACTATTTTCCGGTACATGAAGTGCCCAGAAGACCAGAAGGTGCAGTGTGCAGTCTTCTTCTTGGAGGACAGGGGCACCGCCTGGTGG
GAGACCGCGGAGAGAATGCTAGGGGGCGATGTAAGCAAAATAACATGGGAGCAGTTCAAGGAGAACTTCTATGCTAAGTTTTTCTCCGCCAATGTGAAGCACGCC
AAGCTGCAAGAGTTCCTAAACTTGGAGCAAGGCGACATGACGGTGGAGCAGTACGACGCCGAGTTCGATATGCTGTCCCGCTTTGCTCCCGATATGGTAAGAGAT
GAGGCTGCCAGGACGGAGAAATTTGTTAGAGGACTCAGGCTAGACCTTCAGGGCATTGTCAGAGCCCTCCGCCCAGCCACGCATGCTGATGCACTACGTATAGCA
CTGGATTTGAGCCCCGAGAGCCGAGCCGCTAAGGGCCGGCAGAGGGTCACTGGGACGAAGAGAAAGGGAGAGTTTTCGCCACTACCCGAGGCCGAGCGAGCCGGC
ACTGTGGTGACAGGTACGCTCCCAATTTTGGGGCACTATGCTTTTGTGCTATTTGACTCTGGGTCATCCCACTCGTTTATATCCTCCGTTTTCATTCAGCATGTG
GGTTTAGAGGTAGAGCCTTTGGGTAGTGTTTTGCCGGTTTCTACTCCATCTGGGGAGGTCTTGTTATCCAAAGAACAAATAAAGGCATGTCGGGTAGAGATAGCG
AATCGTATGTTAGACGTGACCTTGCTAGTGTTAGACATGCAGGATTTTGATGTGATACTAGGCATGGATTGGCTGTCAGCCAACCATGCAAATATAGACTGTTAT
GGCAAGGAAGTTGTCTTCAACCCTCCCTCCGAGGCTAGTTTCAAATTCAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAA
CTACTCAGCCAGGGTACTTGGGGTATTTTGGCAAGCGTAGTGGATGTGAGAGAGCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAG
Protein sequenceShow/hide protein sequence
MPPRRGTRRGGGRGGRGAGRGQPEAPPVAPAVDPNAPVTQADLAAMEQRYRDMPQAAWRFLPPSQNQAACSAEAALSAEAAPAQAQAAPVQAQAVAPPAPEEAQP
VPVQLSAEAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKCPEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHA
KLQEFLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIALDLSPESRAAKGRQRVTGTKRKGEFSPLPEAERAG
TVVTGTLPILGHYAFVLFDSGSSHSFISSVFIQHVGLEVEPLGSVLPVSTPSGEVLLSKEQIKACRVEIANRMLDVTLLVLDMQDFDVILGMDWLSANHANIDCY
GKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDVREQKFPYLPNQW