; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO.jh102013.1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO.jh102013.1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr07:10833775..10834860
RNA-Seq ExpressionMELO.jh102013.1
SyntenyMELO.jh102013.1
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026101.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.12e-17890.31Show/hide
Query:  QNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPN
        QNVVGSKWVFRLKRHTDGSILRYKARMVAK FHQHPGVDFFETFS +IKASTIRVVLSIAVTNGWPLRQL+FNNAFLNGHLE+NVYM QPPGYVHPSYP 
Subjt:  QNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPN

Query:  YVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYL
        YVCKLNKAIYGLKQAP AWNATLS+ELLKW FINSRSDSSLFIFRRNNSV+LLLVYVDDIIVT NDSVLISTLIKSLDKQF+LKDLGRLTYFLGFQVNYL
Subjt:  YVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYL

Query:  ESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFL--QKPMDLHW
        +SGFILNQEKYISDLLHKLQLSDLKPA SPSVVGKNLSAFGGTPLEDPFVYR+TIGALQ LTNTRPDI YIVNQLS  L      D+ W
Subjt:  ESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFL--QKPMDLHW

KAA0042448.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.14e-15076.69Show/hide
Query:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE
        MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWP RQLNFNNAFLNGHLEK VYMKQPPGYVHPSYPNYV                        
Subjt:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE

Query:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP
                                           +TGNDSVLISTLIKSLDKQF+LKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQL+DLKP
Subjt:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP

Query:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        A SPS VGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDI YIVNQLSQFLQKP DLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAIS YSDAD
Subjt:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

KAA0051519.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.50e-13572.3Show/hide
Query:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE
        MV K FHQH GVDFFETF+ +IKASTIRVVLSIAVTNGW LRQL+FNNAFLNGHLE+NVYM QPPGYVH SYPNY                         
Subjt:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE

Query:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP
                                           +TGNDSVLISTLIKSLDKQF+LKDLGRLTYFLGFQVNYLESGFILNQ KYISDLLHKLQLSDLKP
Subjt:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP

Query:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        A S SVVGKNL AFGGTPLEDPFVYRNTIGALQYLTNTRPDI YI+NQLSQFLQKP DLHW+AVK VLKYLSGTKSFGLMFQQGDDLAISAYSDAD
Subjt:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

KAA0054331.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.40e-13371.06Show/hide
Query:  ILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAW
        I RYKA +VAK FHQ+P VDFFE FS +IKASTIR+VLS+A++ GW L QL+FNNAFLNG L++ V+M QPPGYV+PSYPNY+CKLNK IY LKQA RAW
Subjt:  ILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAW

Query:  NATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKL
        N T ++ LL WGFINSRSDS LFIF  + SV+LLLVYVDD+IVTGN++ L+  LI SLDKQF+LKDLG L+YFLGFQVNYL+ GF+LNQEKY++DLLHKL
Subjt:  NATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKL

Query:  QLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGA--LQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV
        QL DLKP  S +VVGK+LSA  GTP  DPF+YR+TIGA  +QYLT+TRP+I YIVN LSQFLQ+P D+HW+AV
Subjt:  QLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGA--LQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV

XP_016902198.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like isoform X2 [Cucumis melo]1.47e-21992.75Show/hide
Query:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP
        WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAK FHQHPGVDFFETFS +IKASTIRVVLSIAV NGWPLRQL+FNNAFLNGHLE+NVYM QPP
Subjt:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP

Query:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTY
        GYVHPSYPNYVCKLNKAIYGLKQAP  WNATLS+ELLKWGFINSRSDSSLFIFRRNNSV+LLLVYVDDIIVTGNDSVLISTLIKSLDKQF+LKDLGRLTY
Subjt:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTY

Query:  FLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVK
        FLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP  SPSVVGKNLSAFGGTPLEDPFVYR+TIGALQ LTNTRPDI YIVNQLSQFLQKP +LHW+AVK
Subjt:  FLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVK

Query:  RVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        RVL YLSGTKSFGLMFQQGDDL ISAY D D
Subjt:  RVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

TrEMBL top hitse value%identityAlignment
A0A1S4E1U4 uncharacterized mitochondrial protein AtMg00810-like isoform X27.10e-22092.75Show/hide
Query:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP
        WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAK FHQHPGVDFFETFS +IKASTIRVVLSIAV NGWPLRQL+FNNAFLNGHLE+NVYM QPP
Subjt:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP

Query:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTY
        GYVHPSYPNYVCKLNKAIYGLKQAP  WNATLS+ELLKWGFINSRSDSSLFIFRRNNSV+LLLVYVDDIIVTGNDSVLISTLIKSLDKQF+LKDLGRLTY
Subjt:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTY

Query:  FLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVK
        FLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP  SPSVVGKNLSAFGGTPLEDPFVYR+TIGALQ LTNTRPDI YIVNQLSQFLQKP +LHW+AVK
Subjt:  FLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVK

Query:  RVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        RVL YLSGTKSFGLMFQQGDDL ISAY D D
Subjt:  RVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

A0A5D3B8X5 Putative mitochondrial protein5.42e-17990.31Show/hide
Query:  QNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPN
        QNVVGSKWVFRLKRHTDGSILRYKARMVAK FHQHPGVDFFETFS +IKASTIRVVLSIAVTNGWPLRQL+FNNAFLNGHLE+NVYM QPPGYVHPSYP 
Subjt:  QNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPN

Query:  YVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYL
        YVCKLNKAIYGLKQAP AWNATLS+ELLKW FINSRSDSSLFIFRRNNSV+LLLVYVDDIIVT NDSVLISTLIKSLDKQF+LKDLGRLTYFLGFQVNYL
Subjt:  YVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYL

Query:  ESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFL--QKPMDLHW
        +SGFILNQEKYISDLLHKLQLSDLKPA SPSVVGKNLSAFGGTPLEDPFVYR+TIGALQ LTNTRPDI YIVNQLS  L      D+ W
Subjt:  ESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFL--QKPMDLHW

A0A5D3BWM8 Putative mitochondrial protein2.97e-15076.69Show/hide
Query:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE
        MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWP RQLNFNNAFLNGHLEK VYMKQPPGYVHPSYPNYV                        
Subjt:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE

Query:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP
                                           +TGNDSVLISTLIKSLDKQF+LKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQL+DLKP
Subjt:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP

Query:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        A SPS VGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDI YIVNQLSQFLQKP DLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAIS YSDAD
Subjt:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

A0A5D3CKB5 Putative mitochondrial protein6.78e-13471.06Show/hide
Query:  ILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAW
        I RYKA +VAK FHQ+P VDFFE FS +IKASTIR+VLS+A++ GW L QL+FNNAFLNG L++ V+M QPPGYV+PSYPNY+CKLNK IY LKQA RAW
Subjt:  ILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAW

Query:  NATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKL
        N T ++ LL WGFINSRSDS LFIF  + SV+LLLVYVDD+IVTGN++ L+  LI SLDKQF+LKDLG L+YFLGFQVNYL+ GF+LNQEKY++DLLHKL
Subjt:  NATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKL

Query:  QLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGA--LQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV
        QL DLKP  S +VVGK+LSA  GTP  DPF+YR+TIGA  +QYLT+TRP+I YIVN LSQFLQ+P D+HW+AV
Subjt:  QLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGA--LQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV

A0A5D3DKK9 Putative mitochondrial protein1.21e-13572.3Show/hide
Query:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE
        MV K FHQH GVDFFETF+ +IKASTIRVVLSIAVTNGW LRQL+FNNAFLNGHLE+NVYM QPPGYVH SYPNY                         
Subjt:  MVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRE

Query:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP
                                           +TGNDSVLISTLIKSLDKQF+LKDLGRLTYFLGFQVNYLESGFILNQ KYISDLLHKLQLSDLKP
Subjt:  LLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKP

Query:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        A S SVVGKNL AFGGTPLEDPFVYRNTIGALQYLTNTRPDI YI+NQLSQFLQKP DLHW+AVK VLKYLSGTKSFGLMFQQGDDLAISAYSDAD
Subjt:  ASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

SwissProt top hitse value%identityAlignment
P04146 Copia protein7.8e-4833.43Show/hide
Query:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP
        W++     ++N+V S+WVF +K +  G+ +RYKAR+VA+ F Q   +D+ ETF+ + + S+ R +LS+ +     + Q++   AFLNG L++ +YM+ P 
Subjt:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP

Query:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRN--NSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRL
        G    S  + VCKLNKAIYGLKQA R W     + L +  F+NS  D  ++I  +   N  + +L+YVDD+++   D   ++   + L ++F + DL  +
Subjt:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRN--NSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRL

Query:  TYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFG-----GTPLEDPFVYRNTIGALQY-LTNTRPDITYIVNQLSQFLQKPM
         +F+G ++   E    L+Q  Y+  +L K  + +    S+P     N           TP       R+ IG L Y +  TRPD+T  VN LS++  K  
Subjt:  TYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFG-----GTPLEDPFVYRNTIGALQY-LTNTRPDITYIVNQLSQFLQKPM

Query:  DLHWKAVKRVLKYLSGTKSFGLMFQQ--GDDLAISAYSDAD
           W+ +KRVL+YL GT    L+F++    +  I  Y D+D
Subjt:  DLHWKAVKRVLKYLSGTKSFGLMFQQ--GDDLAISAYSDAD

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-5637.83Show/hide
Query:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP
        + LV     +  +  KWVF+LK+  D  ++RYKAR+V K F Q  G+DF E FS ++K ++IR +LS+A +    + QL+   AFL+G LE+ +YM+QP 
Subjt:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP

Query:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFR-RNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLT
        G+      + VCKLNK++YGLKQAPR W       +    ++ + SD  ++  R   N+ ++LL+YVDD+++ G D  LI+ L   L K F +KDLG   
Subjt:  GYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFR-RNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLT

Query:  YFLGFQV--NYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLS-AFGGTPLED-----PFVYRNTIGALQY-LTNTRPDITYIVNQLSQFLQK
          LG ++          L+QEKYI  +L +  + + KP S+P      LS     T +E+        Y + +G+L Y +  TRPDI + V  +S+FL+ 
Subjt:  YFLGFQV--NYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLS-AFGGTPLED-----PFVYRNTIGALQY-LTNTRPDITYIVNQLSQFLQK

Query:  PMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        P   HW+AVK +L+YL GT    L F  G D  +  Y+DAD
Subjt:  PMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

P25600 Putative transposon Ty5-1 protein YCL074W1.5e-3834.25Show/hide
Query:  LNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVL
        ++ + AFLN  +++ +Y+KQPPG+V+   P+YV +L   +YGLKQAP  WN  ++  L K GF     +  L+    ++  + + VYVDD++V      +
Subjt:  LNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVL

Query:  ISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFI-LNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNT-RPD
           + + L K +S+KDLG++  FLG  ++   +G I L+ + YI+    + +++  K   +P    K L       L+D   Y++ +G L +  NT RPD
Subjt:  ISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFI-LNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNT-RPD

Query:  ITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDA
        I+Y V+ LS+FL++P  +H ++ +RVL+YL  T+S  L ++ G  LA++ Y DA
Subjt:  ITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDA

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE14.1e-9750.9Show/hide
Query:  WSLVPPSPSQ-NVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQP
        W LVPP PS   +VG +W+F  K ++DGS+ RYKAR+VAK ++Q PG+D+ ETFS +IK+++IR+VL +AV   WP+RQL+ NNAFL G L  +VYM QP
Subjt:  WSLVPPSPSQ-NVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQP

Query:  PGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLT
        PG++    PNYVCKL KA+YGLKQAPRAW   L   LL  GF+NS SD+SLF+ +R  S++ +LVYVDDI++TGND  L+   + +L ++FS+KD   L 
Subjt:  PGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLT

Query:  YFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV
        YFLG +   + +G  L+Q +YI DLL +  +   KP ++P      LS + GT L DP  YR  +G+LQYL  TRPDI+Y VN+LSQF+  P + H +A+
Subjt:  YFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV

Query:  KRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        KR+L+YL+GT + G+  ++G+ L++ AYSDAD
Subjt:  KRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE27.7e-9650.6Show/hide
Query:  WSLV-PPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQP
        W LV PP PS  +VG +W+F  K ++DGS+ RYKAR+VAK ++Q PG+D+ ETFS +IK+++IR+VL +AV   WP+RQL+ NNAFL G L   VYM QP
Subjt:  WSLV-PPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQP

Query:  PGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLT
        PG+V    P+YVC+L KAIYGLKQAPRAW   L   LL  GF+NS SD+SLF+ +R  S++ +LVYVDDI++TGND+VL+   + +L ++FS+K+   L 
Subjt:  PGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLT

Query:  YFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV
        YFLG +   +  G  L+Q +Y  DLL +  +   KP ++P      L+   GT L DP  YR  +G+LQYL  TRPD++Y VN+LSQ++  P D HW A+
Subjt:  YFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAV

Query:  KRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        KRVL+YL+GT   G+  ++G+ L++ AYSDAD
Subjt:  KRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.1e-6841.02Show/hide
Query:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP
        W +    P++  +G KWV+++K ++DG+I RYKAR+VAK + Q  G+DF ETFS + K ++++++L+I+    + L QL+ +NAFLNG L++ +YMK PP
Subjt:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWPLRQLNFNNAFLNGHLEKNVYMKQPP

Query:  GYV----HPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLG
        GY         PN VC L K+IYGLKQA R W    S  L+ +GF+ S SD + F+       L +LVYVDDII+  N+   +  L   L   F L+DLG
Subjt:  GYV----HPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLG

Query:  RLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHW
         L YFLG ++    +G  + Q KY  DLL +  L   KP+S P       SA  G    D   YR  IG L YL  TR DI++ VN+LSQF + P   H 
Subjt:  RLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHW

Query:  KAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDA
        +AV ++L Y+ GT   GL +    ++ +  +SDA
Subjt:  KAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDA

ATMG00240.1 Gag-Pol-related retrotransposon family protein1.6e-0844.44Show/hide
Query:  YLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        YLT TRPD+T+ VN+LSQF         +AV +VL Y+ GT   GL +    DL + A++D+D
Subjt:  YLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

ATMG00810.1 DNA/RNA polymerases superfamily protein2.6e-3041.28Show/hide
Query:  LLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFV
        + LL+YVDDI++TG+ + L++ LI  L   FS+KDLG + YFLG Q+    SG  L+Q KY   +L+   + D KP S+P  +  N S+       DP  
Subjt:  LLLLVYVDDIIVTGNDSVLISTLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFV

Query:  YRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD
        +R+ +GALQYLT TRPDI+Y VN + Q + +P    +  +KRVL+Y+ GT   GL   +   L + A+ D+D
Subjt:  YRNTIGALQYLTNTRPDITYIVNQLSQFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)7.3e-1752.17Show/hide
Query:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIA
        W LVPP  +QN++G KWVF+ K H+DG++ R KAR+VAK FHQ  G+ F ET+S +++ +TIR +L++A
Subjt:  WSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCATCACAAGAGGATTTATTTACCATATAACTCTTTGTATTTCTCCTTGAAGACCTTCGCATATCTCTCAACTTCTCCTTCCATTTGGAGCTTGGTACCA
CCATCTCCCTCTCAAAATGTAGTTGGGAGTAAATGGGTATTTCGACTTAAACGTCATACCGATGGTTCAATCCTAAGATACAAAGCCAGAATGGTCGCCAAAAGG
TTTCATCAACACCCCGGTGTAGATTTCTTTGAGACGTTCAGCCTTATTATTAAAGCTTCCACCATTCGAGTTGTTCTTAGTATTGCTGTTACAAATGGATGGCCA
CTTAGACAACTTAATTTTAACAATGCCTTTTTAAATGGCCACCTTGAGAAAAATGTTTATATGAAGCAGCCTCCCGGGTATGTCCATCCCTCTTATCCAAATTAT
GTATGTAAGTTAAACAAAGCAATATATGGGTTGAAACAAGCTCCCCGCGCATGGAATGCTACCTTGTCTAGAGAACTTTTAAAGTGGGGCTTCATAAACTCTCGG
TCGGATTCCTCTTTGTTCATATTTCGAAGAAATAATTCTGTTCTTCTGTTGTTGGTGTACGTTGATGATATTATAGTGACTGGTAATGACTCTGTGTTGATTAGC
ACTTTGATTAAGTCATTGGATAAACAATTTTCTCTAAAAGATCTGGGACGGTTGACTTATTTCCTGGGCTTTCAAGTAAACTATCTTGAATCTGGTTTTATTCTC
AACCAAGAGAAGTATATCAGTGACCTTCTTCATAAACTTCAGCTCAGTGATTTAAAGCCAGCCTCATCTCCAAGTGTTGTTGGAAAAAATCTATCGGCTTTTGGT
GGTACTCCACTTGAAGACCCTTTTGTTTATCGCAACACTATTGGAGCCTTACAATACCTTACGAACACGAGACCGGACATTACCTATATTGTTAATCAATTAAGT
CAGTTTCTTCAAAAGCCTATGGATCTTCATTGGAAAGCCGTTAAACGTGTTCTCAAGTATCTAAGTGGGACAAAATCCTTTGGTTTGATGTTTCAACAAGGTGAT
GATCTGGCCATTTCTGCATACTCCGATGCTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATCATCACAAGAGGATTTATTTACCATATAACTCTTTGTATTTCTCCTTGAAGACCTTCGCATATCTCTCAACTTCTCCTTCCATTTGGAGCTTGGTACCA
CCATCTCCCTCTCAAAATGTAGTTGGGAGTAAATGGGTATTTCGACTTAAACGTCATACCGATGGTTCAATCCTAAGATACAAAGCCAGAATGGTCGCCAAAAGG
TTTCATCAACACCCCGGTGTAGATTTCTTTGAGACGTTCAGCCTTATTATTAAAGCTTCCACCATTCGAGTTGTTCTTAGTATTGCTGTTACAAATGGATGGCCA
CTTAGACAACTTAATTTTAACAATGCCTTTTTAAATGGCCACCTTGAGAAAAATGTTTATATGAAGCAGCCTCCCGGGTATGTCCATCCCTCTTATCCAAATTAT
GTATGTAAGTTAAACAAAGCAATATATGGGTTGAAACAAGCTCCCCGCGCATGGAATGCTACCTTGTCTAGAGAACTTTTAAAGTGGGGCTTCATAAACTCTCGG
TCGGATTCCTCTTTGTTCATATTTCGAAGAAATAATTCTGTTCTTCTGTTGTTGGTGTACGTTGATGATATTATAGTGACTGGTAATGACTCTGTGTTGATTAGC
ACTTTGATTAAGTCATTGGATAAACAATTTTCTCTAAAAGATCTGGGACGGTTGACTTATTTCCTGGGCTTTCAAGTAAACTATCTTGAATCTGGTTTTATTCTC
AACCAAGAGAAGTATATCAGTGACCTTCTTCATAAACTTCAGCTCAGTGATTTAAAGCCAGCCTCATCTCCAAGTGTTGTTGGAAAAAATCTATCGGCTTTTGGT
GGTACTCCACTTGAAGACCCTTTTGTTTATCGCAACACTATTGGAGCCTTACAATACCTTACGAACACGAGACCGGACATTACCTATATTGTTAATCAATTAAGT
CAGTTTCTTCAAAAGCCTATGGATCTTCATTGGAAAGCCGTTAAACGTGTTCTCAAGTATCTAAGTGGGACAAAATCCTTTGGTTTGATGTTTCAACAAGGTGAT
GATCTGGCCATTTCTGCATACTCCGATGCTGACTAG
Protein sequenceShow/hide protein sequence
MHHHKRIYLPYNSLYFSLKTFAYLSTSPSIWSLVPPSPSQNVVGSKWVFRLKRHTDGSILRYKARMVAKRFHQHPGVDFFETFSLIIKASTIRVVLSIAVTNGWP
LRQLNFNNAFLNGHLEKNVYMKQPPGYVHPSYPNYVCKLNKAIYGLKQAPRAWNATLSRELLKWGFINSRSDSSLFIFRRNNSVLLLLVYVDDIIVTGNDSVLIS
TLIKSLDKQFSLKDLGRLTYFLGFQVNYLESGFILNQEKYISDLLHKLQLSDLKPASSPSVVGKNLSAFGGTPLEDPFVYRNTIGALQYLTNTRPDITYIVNQLS
QFLQKPMDLHWKAVKRVLKYLSGTKSFGLMFQQGDDLAISAYSDAD