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MELO3C000076 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C000076
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLOB domain-containing protein
Genome locationchr11:23720916..23721254
RNA-Seq ExpressionMELO3C000076
SyntenyMELO3C000076
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054642.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa]1.3e-47100Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

XP_004150042.1 LOB domain-containing protein 4 [Cucumis sativus]2.1e-4595.96Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH PSSSYNPT GHS ETASPSSKMNIP PNKSYFSMDMVDHDSMGETLWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

XP_008467061.2 PREDICTED: LOB domain-containing protein 4-like, partial [Cucumis melo]1.3e-47100Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

XP_022947417.1 LOB domain-containing protein 4-like [Cucurbita moschata]4.9e-3481.82Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRMR   SSS NPT GHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

XP_038902133.1 LOB domain-containing protein 4-like [Benincasa hispida]7.1e-4188.89Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQID+LQTQLAIAQAEVVHMRMR  PSSS N T+GHS ETASPS KMNIP PNKSYFSMDMVDHD+MGE+LWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

TrEMBL top hitse value%identityAlignment
A0A0A0KBA8 LOB domain-containing protein1.0e-4595.96Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH PSSSYNPT GHS ETASPSSKMNIP PNKSYFSMDMVDHDSMGETLWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

A0A1S3CSM8 LOB domain-containing protein 4-like6.5e-48100Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

A0A5D3CBA3 LOB domain-containing protein 4-like6.5e-48100Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

A0A6J1G6E3 LOB domain-containing protein 4-like2.4e-3481.82Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRMR   SSS NPT GHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

A0A6J1I1K8 LOB domain-containing protein 4-like2.4e-3481.82Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC
        MVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRMR   SSS NPT GHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC

SwissProt top hitse value%identityAlignment
Q8L5T5 LOB domain-containing protein 155.7e-0949.15Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------IPSSS
        +VYEAN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R       +PS+S
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------IPSSS

Q8LBW3 LOB domain-containing protein 121.2e-1164.71Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPS
        +V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M++ P+
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPS

Q9LQR0 LOB domain-containing protein 12.0e-0963.83Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR
        MVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+V+M+ +
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR

Q9SA51 LOB domain-containing protein 34.5e-1446Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS---MDMVDHDSMGETLWS
        MVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R  H           H+      +S +  P  NK ++S   M +   D  G+ LWS
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS---MDMVDHDSMGETLWS

Q9SHE9 LOB domain-containing protein 44.8e-2464.36Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR---HIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS-MDMVDHDSMGETLW
        MVYEANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+R   + P     P    SS   SPSSK   P  NK  FS MD+VD  S+GE++W
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR---HIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS-MDMVDHDSMGETLW

Query:  S
        S
Subjt:  S

Arabidopsis top hitse value%identityAlignment
AT1G07900.1 LOB domain-containing protein 11.4e-1063.83Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR
        MVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+V+M+ +
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR

AT1G16530.1 ASYMMETRIC LEAVES 2-like 93.2e-1546Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS---MDMVDHDSMGETLWS
        MVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R  H           H+      +S +  P  NK ++S   M +   D  G+ LWS
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS---MDMVDHDSMGETLWS

AT1G31320.1 LOB domain-containing protein 43.4e-2564.36Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR---HIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS-MDMVDHDSMGETLW
        MVYEANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+R   + P     P    SS   SPSSK   P  NK  FS MD+VD  S+GE++W
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR---HIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFS-MDMVDHDSMGETLW

Query:  S
        S
Subjt:  S

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein8.7e-1364.71Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPS
        +V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M++ P+
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPS

AT2G40470.1 LOB domain-containing protein 154.1e-1049.15Show/hide
Query:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------IPSSS
        +VYEAN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R       +PS+S
Subjt:  MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------IPSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATGAGGCAAACGCAAGGGTACGAGATCCCGTGTATGGTTGTGTTGGAGCCATATCATCGTTACAACAACAGATTGATCTCTTGCAAACACAACTAGCAATAGC
GCAAGCGGAGGTGGTTCACATGCGGATGCGCCACATCCCGTCATCCTCTTACAACCCAACGATGGGCCACTCATCGGAAACCGCCTCGCCCTCCAGCAAGATGAACATTC
CGGTGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAG
mRNA sequenceShow/hide mRNA sequence
GAGCTACCGGAACAACAACGAAGCGATGCAGTAAGTTCGATGGTGTATGAGGCAAACGCAAGGGTACGAGATCCCGTGTATGGTTGTGTTGGAGCCATATCATCGTTACA
ACAACAGATTGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACATCCCGTCATCCTCTTACAACCCAACGATGGGCCACT
CATCGGAAACCGCCTCGCCCTCCAGCAAGATGAACATTCCGGTGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCG
TCTTGCTAG
Protein sequenceShow/hide protein sequence
MVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC