CuGenDBv2

Gene ID	MELO3C000192
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	LOB domain-containing protein 18-like
Genome location	chr11:31685370..31685747
RNA-Seq Expression	MELO3C000192
Synteny	MELO3C000192
Gene Ontology terms	GO:0009755 - hormone-mediated signaling pathway (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0040004.1 LOB domain-containing protein 18-like [Cucumis melo var. makuwa]

7.3e-59

99.2

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VVSLQAELTYLQAHLATLELPSPPNPPPPPPP SFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELLLRHGAPPCSDASSPQSLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

KAG7013372.1 LOB domain-containing protein 18, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.0e-45

83.33

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGG-GGSSTAPGEGDLQ
        VVSLQAEL+YLQAHLATLELPS      P PPP+F  QPP+SISDLPSASSLP TYDLSSLFDPMAQPAWAMQQQRLDHRQF+ GG GGSST PGEGDLQ
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGG-GGSSTAPGEGDLQ

Query:  ALARELLLRHGAPPCSDASSPQSLSK
        ALAR LL RHG PPCSDASSP SLSK
Subjt:  ALARELLLRHGAPPCSDASSPQSLSK

XP_004145058.1 LOB domain-containing protein 18 [Cucumis sativus]

8.6e-60

100

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELLLRHGAPPCSDASSPQSLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

XP_008467030.2 PREDICTED: LOB domain-containing protein 18-like, partial [Cucumis melo]

8.6e-60

100

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELLLRHGAPPCSDASSPQSLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

XP_022153318.1 LOB domain-containing protein 18-like [Momordica charantia]

7.3e-51

93.6

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VV+LQAEL+YLQAHLATLELPSPPN PPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAM QQRLDHRQF GGGGGSSTA GEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELL RHGAPPCSDASSP SLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEN5 LOB domain-containing protein

4.2e-60

100

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELLLRHGAPPCSDASSPQSLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

A0A1S3CSK3 LOB domain-containing protein 18-like

4.2e-60

100

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELLLRHGAPPCSDASSPQSLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

A0A5D3DLI5 LOB domain-containing protein 18-like

3.5e-59

99.2

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VVSLQAELTYLQAHLATLELPSPPNPPPPPPP SFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELLLRHGAPPCSDASSPQSLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

A0A6J1DH60 LOB domain-containing protein 18-like

3.5e-51

93.6

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA
        VV+LQAEL+YLQAHLATLELPSPPN PPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAM QQRLDHRQF GGGGGSSTA GEGDLQA
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQA

Query:  LARELLLRHGAPPCSDASSPQSLSK
        LARELL RHGAPPCSDASSP SLSK
Subjt:  LARELLLRHGAPPCSDASSPQSLSK

A0A6J1H4Q1 LOB domain-containing protein 18-like

2.9e-45

83.33

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQF-AGGGGGSSTAPGEGDLQ
        VVSLQAEL+YLQAHLATLELPS      PPPPP+F  QPP+SISDLPSASSLP TYDLSSLFDPMAQPAWAMQQQRLDHRQF +GG GGSST  GEGDLQ
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQF-AGGGGGSSTAPGEGDLQ

Query:  ALARELLLRHGAPPCSDASSPQSLSK
        ALAR LL RHG PPCSDASSP SLSK
Subjt:  ALARELLLRHGAPPCSDASSPQSLSK

SwissProt top hits

e value

%identity

Alignment

O22131 LOB domain-containing protein 18

7.7e-19

51.8

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Query:  VVSLQAELTYLQAHLATLELPSP---PNPPPPPPPPSFPAQPPLSISDLP-SASSLPATYDLSSLFD-PMAQPAWAMQQQR-LDHR-QFAGGGGGSSTAP
        VV+LQAE++YLQAHLA+LELP P   P P P P P  F   PPL+I+DLP S S LP+TYDL+S+FD   +  AWA QQ+R +D R Q+      SS A 
Subjt:  VVSLQAELTYLQAHLATLELPSP---PNPPPPPPPPSFPAQPPLSISDLP-SASSLPATYDLSSLFD-PMAQPAWAMQQQR-LDHR-QFAGGGGGSSTAP

Query:  GEG-----DLQALARELLLRHGAPP--CSDASSPQSLSK
        G G     DLQALA ELL R G+PP   +D S  +++S+
Subjt:  GEG-----DLQALARELLLRHGAPP--CSDASSPQSLSK

O81323 LOB domain-containing protein 30

2.6e-14

54.95

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQ-RLDHRQFAGGGGGSSTAPGEGDLQ
        VVSLQ EL+YLQAHLATLELP P   PP  P  S  +   LSI+DLP+ S  P+ YDLSS+F+P+    WAMQQQ R     F  G   SS   G G+LQ
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQ-RLDHRQFAGGGGGSSTAPGEGDLQ

Query:  ALARELLLRHG
        ALARE +  HG
Subjt:  ALARELLLRHG

Arabidopsis top hits

e value

%identity

Alignment

AT2G45420.1 LOB domain-containing protein 18

5.5e-20

51.8

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Query:  VVSLQAELTYLQAHLATLELPSP---PNPPPPPPPPSFPAQPPLSISDLP-SASSLPATYDLSSLFD-PMAQPAWAMQQQR-LDHR-QFAGGGGGSSTAP
        VV+LQAE++YLQAHLA+LELP P   P P P P P  F   PPL+I+DLP S S LP+TYDL+S+FD   +  AWA QQ+R +D R Q+      SS A 
Subjt:  VVSLQAELTYLQAHLATLELPSP---PNPPPPPPPPSFPAQPPLSISDLP-SASSLPATYDLSSLFD-PMAQPAWAMQQQR-LDHR-QFAGGGGGSSTAP

Query:  GEG-----DLQALARELLLRHGAPP--CSDASSPQSLSK
        G G     DLQALA ELL R G+PP   +D S  +++S+
Subjt:  GEG-----DLQALARELLLRHGAPP--CSDASSPQSLSK

AT4G00220.1 Lateral organ boundaries (LOB) domain family protein

1.8e-15

54.95

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Query:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQ-RLDHRQFAGGGGGSSTAPGEGDLQ
        VVSLQ EL+YLQAHLATLELP P   PP  P  S  +   LSI+DLP+ S  P+ YDLSS+F+P+    WAMQQQ R     F  G   SS   G G+LQ
Subjt:  VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQ-RLDHRQFAGGGGGSSTAPGEGDLQ

Query:  ALARELLLRHG
        ALARE +  HG
Subjt:  ALARELLLRHG

Sequences

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CDS sequence

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GTGGTGAGTTTGCAAGCCGAGCTGACGTACCTTCAAGCCCATCTAGCAACACTGGAGCTCCCGTCGCCGCCGAACCCACCTCCGCCACCTCCACCGCCAAGTTTTCCGGC
GCAACCACCGCTTTCCATCTCTGACCTGCCATCGGCTTCCTCCCTGCCGGCCACTTACGACTTGTCGTCTCTCTTCGACCCAATGGCTCAGCCTGCATGGGCCATGCAAC
AGCAACGGCTCGACCACCGCCAGTTCGCCGGCGGAGGTGGCGGTTCATCCACGGCGCCCGGAGAGGGCGATCTTCAAGCTCTGGCCCGCGAACTCCTCCTTAGACACGGC
GCTCCGCCGTGCTCCGACGCCTCGTCGCCCCAATCGCTCTCCAAATGA

mRNA sequence

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Protein sequence

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VVSLQAELTYLQAHLATLELPSPPNPPPPPPPPSFPAQPPLSISDLPSASSLPATYDLSSLFDPMAQPAWAMQQQRLDHRQFAGGGGGSSTAPGEGDLQALARELLLRHG
APPCSDASSPQSLSK

MELO3C000192 (gene) of Melon (DHL92) v4 genome