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MELO3C001168 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C001168
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description40S ribosomal protein S13
Genome locationchr05:14006789..14006933
RNA-Seq ExpressionMELO3C001168
SyntenyMELO3C001168
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0006744 - ubiquinone biosynthetic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0031314 - extrinsic component of mitochondrial inner membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR009068 - S15/NS1, RNA-binding
IPR023029 - Ribosomal protein S15P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025155.1 uncharacterized protein E6C27_scaffold2405G00020 [Cucumis melo var. makuwa]8.8e-1390.7Show/hide
Query:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSK
        MC FLLLSKG+APEI EDLYHLIKKVVS+RKHLERNRKDKDSK
Subjt:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSK
KAA0051790.1 putative ribosomal protein S13 [Cucumis melo var. makuwa]6.1e-1487.23Show/hide
Query:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIV
        MC FLLLSKG+APEIPEDLYHLIKKVVS+RKHLERNRKDKDSK   V
Subjt:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIV
MXQ84898.1 hypothetical protein [Bos mutus]1.1e-1075Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+AP++PEDLYHLIKK V+VRKHLERNRKDKD+K H++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
VDD87991.1 unnamed protein product [Enterobius vermicularis]8.3e-1179.55Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+APEIPEDLYHLIKK VS+RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
XP_041527338.1 40S ribosomal protein S13-like [Microtus oregoni]1.1e-1075Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+AP++PEDLYHLIKK V+VRKHLERNRKDKD+K H++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
TrEMBL top hitse value%identityAlignment
A0A0N4V0I2 40S ribosomal protein S134.0e-1179.55Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+APEIPEDLYHLIKK VS+RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
A0A0N5AK96 40S ribosomal protein S134.0e-1179.55Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+APEIPEDLYHLIKK VS+RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
A0A5A7SL06 ULP_PROTEASE domain-containing protein4.3e-1390.7Show/hide
Query:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSK
        MC FLLLSKG+APEI EDLYHLIKKVVS+RKHLERNRKDKDSK
Subjt:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSK
A0A5A7U9F0 Putative ribosomal protein S133.0e-1487.23Show/hide
Query:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIV
        MC FLLLSKG+APEIPEDLYHLIKKVVS+RKHLERNRKDKDSK   V
Subjt:  MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIV
A0A6P3IQD5 40S ribosomal protein S135.2e-1175Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+AP++PEDLYHLIKK V+VRKHLERNRKDKD+K H++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
SwissProt top hitse value%identityAlignment
P62299 40S ribosomal protein S135.4e-1375Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L +KG+APEIPEDLYHLIKK V++RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
P62300 40S ribosomal protein S135.4e-1375Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L +KG+APEIPEDLYHLIKK V++RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
P62302 40S ribosomal protein S139.2e-1375Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L + G+APEIPEDLYHLIKK VS+RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
Q56JX8 40S ribosomal protein S131.2e-1272.73Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+AP++PEDLYHLIKK V+VRKHLERNRKDKD+K  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
Q6ITC7 40S ribosomal protein S131.2e-1272.73Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L SKG+AP++PEDLYHLIKK V+VRKHLERNRKDKD+K  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
Arabidopsis top hitse value%identityAlignment
AT3G60770.1 Ribosomal protein S13/S151.5e-1372.73Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L + G+APEIPEDLYHLIKK V++RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
AT4G00100.1 ribosomal protein S13A1.5e-1372.73Show/hide
Query:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL
        +L + G+APEIPEDLYHLIKK V++RKHLERNRKDKDSK  ++L
Subjt:  LLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGCTTTTTTATTACTATCAAAAGGGATTGCTCCGGAGATTCCTGAGGATCTTTACCATTTGATTAAGAAGGTTGTCTCGGTTAGAAAGCATTTGGAAAGG
AACAGAAAGGACAAAGACTCCAAGGTACACATTGTACTC
mRNA sequenceShow/hide mRNA sequence
ATGTGTGCTTTTTTATTACTATCAAAAGGGATTGCTCCGGAGATTCCTGAGGATCTTTACCATTTGATTAAGAAGGTTGTCTCGGTTAGAAAGCATTTGGAAAGG
AACAGAAAGGACAAAGACTCCAAGGTACACATTGTACTCT
Protein sequenceShow/hide protein sequence
MCAFLLLSKGIAPEIPEDLYHLIKKVVSVRKHLERNRKDKDSKVHIVL