; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C001950 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C001950
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTPR_REGION domain-containing protein
Genome locationchr12:25815568..25818506
RNA-Seq ExpressionMELO3C001950
SyntenyMELO3C001950
Gene Ontology termsNA
InterPro domainsIPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137391.1 uncharacterized protein LOC101213093 [Cucumis sativus]3.9e-8693.64Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HCGTPARAADLIIQLSG+DSDSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

XP_008437609.1 PREDICTED: tetratricopeptide repeat protein 1 [Cucumis melo]8.1e-92100Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

XP_022923908.1 small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X1 [Cucurbita moschata]1.0e-6275.72Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HC TPARAA++I+QLSG  SDS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

XP_022923909.1 uncharacterized protein LOC111431489 isoform X2 [Cucurbita moschata]1.0e-6275.72Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HC TPARAA++I+QLSG  SDS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

XP_038894326.1 uncharacterized protein LOC120082956 [Benincasa hispida]5.3e-7583.06Show/hide
Query:  MKGSVCFLCASLPFLPN--------PNHTSFSSSSDSISKRSSIHAQ--THHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNV
        MKGSVCFLCA LPFLPN         + +S SSSS+SISKR  IHAQ  THHQEIRVCTNRTCRRQGSF ALEIL+ALAPPTI VN SGCLG+CGAGPNV
Subjt:  MKGSVCFLCASLPFLPN--------PNHTSFSSSSDSISKRSSIHAQ--THHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNV

Query:  AVLPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        AVLPDGFV+GHCGTPARAA++IIQLSG DSDSVGVSKSLEALALRKRAQCELED NFSQA+LLLSQAIDL PCGGIHIIFKDR
Subjt:  AVLPDGFVIGHCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

TrEMBL top hitse value%identityAlignment
A0A0A0LQA2 TPR_REGION domain-containing protein1.9e-8693.64Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        MKGSVCFLC SLPFLPNPN+ SFSSSSDSISKRS IHAQTHHQEIRVCTNRTCRRQGSF ALEIL+ALAPP IVVNPSGCLGKCGAGPNVAVLPDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HCGTPARAADLIIQLSG+DSDSVG+SKSLEALALRKRAQCELEDGNFSQAELLLSQAIDL PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

A0A1S3AUF9 tetratricopeptide repeat protein 13.9e-92100Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

A0A6J1E7P1 uncharacterized protein LOC111431489 isoform X25.0e-6375.72Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HC TPARAA++I+QLSG  SDS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

A0A6J1EAV3 small glutamine-rich tetratricopeptide repeat-containing protein beta isoform X15.0e-6375.72Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE LSALAPPTI VNPSGCLGKCGAGPNVAVLPDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HC TPARAA++I+QLSG  SDS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

A0A6J1KQA5 uncharacterized protein LOC1114955181.6e-6173.99Show/hide
Query:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG
        M  ++C LC  L F   PN TSFSS+S S+   + I AQ  +QEIRVCTNRTCRRQGSF  LE L ALAPPTI VNPSGCLGKCGAGPNVAV PDGFV+G
Subjt:  MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIG

Query:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
        HC TPARAA++I++LSG  SDS+GVSKSLEALALRKRA+CE+EDGNFSQA+LLLS+AI+L PCGGIHIIFKDR
Subjt:  HCGTPARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G17670.1 tetratricopeptide repeat (TPR)-containing protein3.9e-3654.48Show/hide
Query:  QEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSG---RDSDSVGVSKSLEALALRKRAQ
        +EIRVCTNRTCRRQGSF  LE L+ALAPP + V    CLG+CG+GPN+  LP G ++ HC TP+RAA+++  L G     S S  V+ +L ALAL   A 
Subjt:  QEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSG---RDSDSVGVSKSLEALALRKRAQ

Query:  CELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
         +++ GNFS+AE LL+QA++L P GG+H IFK R
Subjt:  CELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR

AT3G17670.2 tetratricopeptide repeat (TPR)-containing protein3.9e-3654.48Show/hide
Query:  QEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSG---RDSDSVGVSKSLEALALRKRAQ
        +EIRVCTNRTCRRQGSF  LE L+ALAPP + V    CLG+CG+GPN+  LP G ++ HC TP+RAA+++  L G     S S  V+ +L ALAL   A 
Subjt:  QEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTPARAADLIIQLSG---RDSDSVGVSKSLEALALRKRAQ

Query:  CELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR
         +++ GNFS+AE LL+QA++L P GG+H IFK R
Subjt:  CELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGAAGTGTGTGTTTCCTCTGCGCGTCTCTCCCATTTCTTCCAAATCCAAACCACACCTCTTTCTCTTCTTCTTCAGATTCCATTTCTAAACGTAGCTCG
ATTCATGCTCAAACTCACCACCAAGAGATTCGCGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCTCGCCCTCGAAATTCTCAGCGCCCTCGCACCT
CCCACCATTGTCGTCAATCCCTCCGGTTGTTTAGGCAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGACGGATTCGTCATCGGCCATTGTGGCACACCT
GCTCGGGCTGCCGACCTCATCATCCAATTATCTGGCCGAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGAGAGCTCAATGT
GAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAATACCATGTGGAGGTATCCATATAATATTCAAGGACAGGTGTTCT
ACTTCTAGTTCTATGTTCTATCTTATTACATATAAATCATGGCTATCTGTCCCCTCTTATACTAATTTTGGTAACTATAGTTGA
mRNA sequenceShow/hide mRNA sequence
AATGATAAAATGAAACGTGGAGGGGCGCGCGCGCGCACTGACAGTGTCTCCACACTCTAATAAAAGCGAAAGAAAGAATAAAGACAATACGAAAAGCAAAGGGAT
AGAAAGGGGGAATGAAGGGAAGTGTGTGTTTCCTCTGCGCGTCTCTCCCATTTCTTCCAAATCCAAACCACACCTCTTTCTCTTCTTCTTCAGATTCCATTTCTA
AACGTAGCTCGATTCATGCTCAAACTCACCACCAAGAGATTCGCGTTTGCACCAATCGCACTTGCCGCCGTCAAGGTTCCTTTCTCGCCCTCGAAATTCTCAGCG
CCCTCGCACCTCCCACCATTGTCGTCAATCCCTCCGGTTGTTTAGGCAAGTGTGGCGCTGGCCCTAATGTTGCTGTTTTGCCCGACGGATTCGTCATCGGCCATT
GTGGCACACCTGCTCGGGCTGCCGACCTCATCATCCAATTATCTGGCCGAGACTCAGATTCTGTTGGTGTCTCCAAGAGTTTGGAGGCTCTTGCTCTGAGGAAGA
GAGCTCAATGTGAGTTGGAGGACGGGAATTTCTCCCAGGCTGAGCTACTTCTTTCGCAGGCGATAGATTTAATACCATGTGGAGGTATCCATATAATATTCAAGG
ACAGGTGTTCTACTTCTAGTTCTATGTTCTATCTTATTACATATAAATCATGGCTATCTGTCCCCTCTTATACTAATTTTGGTAACTATAGTTGAACTTACGGCG
GTAAACGCCGACAATTATTGTTGCTCGTCGATTTATCCTGTATCTTTCTAGCATTTCTATATTTCTGCACTTAAAAAACTGTGTAAATGTATTTGCTAAAGCAGA
TGCATCCGGAAACTATAGTTTCACAGAACTAGTAAATTTTCAGGTCCGTCGTAAGATTGGCACTGGGGAATCACTCTGGCGCCCTTGAAGATGCAAATGAAGCTC
TAAGAGTAGCTCCTCAATATCTAGAGGCTTACATTTGCCAAGGTGACGTATTTTTAGCTATGGACAAGTTTGACTCGGCTGAGATATCATATTCAACAGCTTTAG
AAATTGATCCTTCAATTCGTCGTTCAAAGTCATTCAAGGCGCGAGTTGCTAAACTTCAGGAGAAGCTCAGTGCTGTGAGAACACAATAAACCTGAGATGTGGGTC
GAGGAAGAAAAATAATTAATGAAAAACAGTTCGAGACTCAGTCATTCCTTCAGGTTGTTTCCAGGTTTCAAATTTCTGACTCAGTTTGTCTTTGAAATCTTCATT
AGATTAAATGCATATGAATTTGATACTATTTTGGAGTTCAATGGAAATCTGAATAATTTGTATAATCTACATGAGAATGATTTTAATATGGGGGAAAATAGGTGG
AGAAAAGCATCAGACAGTAAATGTTTGAAGAAAAAGTACTGATCATAGTTCAGAAATGTTCGGATGGATTATATAGTGTCTTTGTGCTTATAAAATTCACTCCAA
AGTTTGAATGCAATAAAAATAATCTGGAGATTAATAATTTT
Protein sequenceShow/hide protein sequence
MKGSVCFLCASLPFLPNPNHTSFSSSSDSISKRSSIHAQTHHQEIRVCTNRTCRRQGSFLALEILSALAPPTIVVNPSGCLGKCGAGPNVAVLPDGFVIGHCGTP
ARAADLIIQLSGRDSDSVGVSKSLEALALRKRAQCELEDGNFSQAELLLSQAIDLIPCGGIHIIFKDRCSTSSSMFYLITYKSWLSVPSYTNFGNYS