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MELO3C002013 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C002013
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLYR motif-containing protein 4
Genome locationchr12:25488833..25489319
RNA-Seq ExpressionMELO3C002013
SyntenyMELO3C002013
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5807263.1 putative complex 1 LYR protein [Helianthus annuus]4.7e-2875Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATPS SEIL+LFRSLLR+ARQFPDYNIREY KRRTID+FR N++LS+ SSI++A++ G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

KAG6607477.1 LYR motif-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia]8.3e-3390.8Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA PS SEIL+LFRSLLRTARQFPDYNIREY KRRTID+FRENQSLSD SSISS YAGG+AQLEVAKRQALVYSLYAPKVKSIMDVN
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

KGN64034.1 hypothetical protein Csa_014098 [Cucumis sativus]3.6e-3695.45Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATPS+SEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQ+LSDASSISS YAGGRAQLEVAKRQA+VYSLYAPKVKSIMDVNH
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

XP_022137452.1 LYR motif-containing protein 4 [Momordica charantia]2.0e-3190.7Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV
        MATPS SEILSLFRSLLRTARQF DYNIREY KRR ID+FREN+SLSD SSISSAYAGG+AQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV

XP_038894896.1 LYR motif-containing protein 4 [Benincasa hispida]1.2e-3494.25Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MATPS SE+LSLFRSLLRTARQFPDYNIREY KRRTID+FRENQSLSDASSISSAYAGG+AQLEVAKRQALVYSLYAPKVKSIMDVN
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

TrEMBL top hitse value%identityAlignment
A0A0A0LST7 Uncharacterized protein1.7e-3695.45Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATPS+SEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQ+LSDASSISS YAGGRAQLEVAKRQA+VYSLYAPKVKSIMDVNH
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

A0A1S3XFP4 LYR motif-containing protein 41.9e-2773.56Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PS  E+L+LFRSLL+TARQFPDYNIREY KRRTID FR+N+ LSD S +++A++ GRAQLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A1U7V895 LYR motif-containing protein 44.3e-2772.41Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN
        MA+PS  E+L+LFRSLL+TARQFPDYNIREY KRRTID FR+N+ LSD S +++A++ GR+QLEVAKRQA+VYSLYAPKVKS+M++N
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVN

A0A251UU63 Putative complex 1 LYR protein2.3e-2875Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        MATPS SEIL+LFRSLLR+ARQFPDYNIREY KRRTID+FR N++LS+ SSI++A++ G++QL+VAKRQA+VYSLYAPK+KSIMD+ H
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

A0A6J1C8A4 LYR motif-containing protein 49.9e-3290.7Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV
        MATPS SEILSLFRSLLRTARQF DYNIREY KRR ID+FREN+SLSD SSISSAYAGG+AQLEVAKRQALVYSLYAPKVKSIMDV
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV

SwissProt top hitse value%identityAlignment
B5X5U9 LYR motif-containing protein 4A1.4e-0635.53Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLY
        MA  S ++++SL+R L++ +++FP YN R Y  RR  DSFREN  + +  ++       R  L V +RQ  +  +Y
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLY

B5XD90 LYR motif-containing protein 4B1.2e-0735Show/hide
Query:  SSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMD
        ++++LSL+R L++ + +FP YN R Y  RR  D+FR N+S+ D   +      GR  L++ +RQ  +  +Y P  K+I++
Subjt:  SSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMD

B8JLQ0 LYR motif-containing protein 41.8e-0636.36Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA
        MA+ S ++++SL+R L++ +++FP YN R Y  RR  D FREN  + +  ++       R  L V KRQ  +  LY+
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA

Q6DCS1 LYR motif-containing protein 43.1e-0632.95Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH
        M+  S S++LSL++ +LR +++F  YN R Y  RR  D+FRE +++ D   I +     +  L V +RQ  +  +YA     I    H
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH

Q9HD34 LYR motif-containing protein 46.2e-0737.66Show/hide
Query:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA
        MA  S +++LSL+R++LR +++F  YN R Y  RR  D+FREN+++ D   I +     +  L V +RQ  +  LY+
Subjt:  MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYA

Arabidopsis top hitse value%identityAlignment
AT5G61220.1 LYR family of Fe/S cluster biogenesis protein1.3e-2060.98Show/hide
Query:  SSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV
        SSSE+LSL R+LLR  RQFPDYNIREY KRRT+D FR N++L+D S ++ AYA  + QL VA+R   VY  Y PK K+IM+V
Subjt:  SSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCCGTCGAGCTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGAACGGCCCGTCAATTTCCTGATTACAACATCAGAGAATACATCAAACGCCGTACCAT
TGATTCTTTCCGAGAAAATCAGAGTCTCTCCGACGCTTCATCCATCTCCTCCGCCTACGCTGGCGGCAGAGCTCAGCTCGAGGTTGCCAAGCGCCAGGCCCTTGTTTACT
CTCTTTACGCGCCTAAGGTCAAGAGCATCATGGATGTCAACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATCCCTAGGCTCTTCCTCCTTCACCGATGGCAACTCCGTCGAGCTCTGAGATCCTCTCGCTCTTTCGTTCTCTCCTGCGAACGGCCCGTCAATTTCCTGATTACAACATC
AGAGAATACATCAAACGCCGTACCATTGATTCTTTCCGAGAAAATCAGAGTCTCTCCGACGCTTCATCCATCTCCTCCGCCTACGCTGGCGGCAGAGCTCAGCTCGAGGT
TGCCAAGCGCCAGGCCCTTGTTTACTCTCTTTACGCGCCTAAGGTCAAGAGCATCATGGATGTCAACCATTGATTTCAATTTCTTTTTGTTTTTTTTTTTTTTTTGGTTC
GATGAATTTGTAGTATTTGAGAATTTTTGTGAGAATTGAATTGTAAACTGACATTCTGTTGTTATTAATTATGAGCAAATTTTTTTCCATCCCATCCTGAAATTCTCTTG
CGAGCTTAATTTCGAAAGTAAAATTAGGGATTTTTTCCCTTTGAGTC
Protein sequenceShow/hide protein sequence
MATPSSSEILSLFRSLLRTARQFPDYNIREYIKRRTIDSFRENQSLSDASSISSAYAGGRAQLEVAKRQALVYSLYAPKVKSIMDVNH