; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C002946 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C002946
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr09:8348420..8348761
RNA-Seq ExpressionMELO3C002946
SyntenyMELO3C002946
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038868.1 uncharacterized protein E6C27_scaffold1170G00200 [Cucumis melo var. makuwa]3.1e-36100Show/hide
Query:  MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWL
        MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWL
Subjt:  MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWL

KAA0042295.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-1256.92Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ +  Q   RT      DPEK YGI+R + LGATVFEGS DPAD+E+WL M+EKCF+V+ CPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

KAA0051049.1 uncharacterized protein E6C27_scaffold678G00020 [Cucumis melo var. makuwa]4.8e-1358.46Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ + AQ   R     S DPEK YGI+R + LGATVFEGS DP D+E+WL M+EKCF+V+KCPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

KAA0066849.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.8e-1256.92Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ +  Q   RT      DPEK YGI+R + LGATVFEGS DPAD+E+WL M+EKCF+V+ CPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

TYK11538.1 uncharacterized protein E5676_scaffold1301G00020 [Cucumis melo var. makuwa]4.8e-1358.46Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ + AQ   R     S DPEK YGI+R + LGATVFEGS DP D+E+WL M+EKCF+V+KCPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

TrEMBL top hitse value%identityAlignment
A0A5A7T7M3 Uncharacterized protein1.5e-36100Show/hide
Query:  MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWL
        MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWL
Subjt:  MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWL

A0A5A7U2V7 Reverse transcriptase8.8e-1356.92Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ +  Q   RT      DPEK YGI+R + LGATVFEGS DPAD+E+WL M+EKCF+V+ CPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

A0A5A7UBY2 Retrotrans_gag domain-containing protein2.3e-1358.46Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ + AQ   R     S DPEK YGI+R + LGATVFEGS DP D+E+WL M+EKCF+V+KCPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

A0A5D3BS67 Reverse transcriptase8.8e-1356.92Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ +  Q   RT      DPEK YGI+R + LGATVFEGS DPAD+E+WL M+EKCF+V+ CPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

A0A5D3CK23 Retrotrans_gag domain-containing protein2.3e-1358.46Show/hide
Query:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE
        +Q+ + AQ   R     S DPEK YGI+R + LGATVFEGS DP D+E+WL M+EKCF+V+KCPE
Subjt:  KQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGACTCGAGGTTCTACCCAGAAACAATCTGAGGAGGAATTTAGCACTCCAATACCAAGCTGAGACTGAAGAGAAACAATATCATAAATTTGCCCAAAGA
TTTATGAGGACAATGGGACCAACATCTGGTGATCCTGAAAAAAAGTATGGTATCAAACGACATAGGAACTTGGGAGCTACAGTATTTGAGGGTTCGAGAGACCCA
GCAGATTCTGAATCATGGTTGGTAATGATAGAAAAGTGTTTTAATGTCCTAAAGTGTCCTGAGTTCGTAGCACCATGTCGCTCTAGTTGA
mRNA sequenceShow/hide mRNA sequence
GAGTCATGCCTCAGCAACGTAACAGACAGTGTAAGTGAGATCATGACGGGACTCGAGGTTCTACCCAGAAACAATCTGAGGAGGAATTTAGCACTCCAATACCAA
GCTGAGACTGAAGAGAAACAATATCATAAATTTGCCCAAAGATTTATGAGGACAATGGGACCAACATCTGGTGATCCTGAAAAAAAGTATGGTATCAAACGACAT
AGGAACTTGGGAGCTACAGTATTTGAGGGTTCGAGAGACCCAGCAGATTCTGAATCATGGTTGGTAATGATAGAAAAGTGTTTTAATGTCCTAAAGTGTCCTGAG
TTCGTAGCACCATGTCGCTCTAGTTGA
Protein sequenceShow/hide protein sequence
MTGLEVLPRNNLRRNLALQYQAETEEKQYHKFAQRFMRTMGPTSGDPEKKYGIKRHRNLGATVFEGSRDPADSESWLVMIEKCFNVLKCPEFVAPCRSS