; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C002964 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C002964
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr09:8701177..8704671
RNA-Seq ExpressionMELO3C002964
SyntenyMELO3C002964
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458679.1 PREDICTED: uncharacterized protein LOC103498007 [Cucumis melo]4.0e-3444.5Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTL-LPELH
        +L FR++  ++LL  TPVL  +G  VDI+ +P  L+LMLT+ SP F+A LQ+S+E FN++  D T   RF++ +FY  MY+MEL+ +S M FT+ +  L 
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTL-LPELH

Query:  AVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
         +FLTF+D N  ++ R   R L +L Y +D    I+Y  F SIDSKDFK +V E ++ S     SDS+A+F   +KEI+FTKEE +C+IG   E + +R+
Subjt:  AVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

XP_016903444.1 PREDICTED: uncharacterized protein LOC103503425 [Cucumis melo]6.4e-165100Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
        MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA

Query:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLR
        VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLR
Subjt:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLR

Query:  SQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITR
        SQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITR
Subjt:  SQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITR

Query:  VNVKAKLR
        VNVKAKLR
Subjt:  VNVKAKLR

XP_023006012.1 uncharacterized protein LOC111498889 [Cucurbita maxima]2.8e-2744.85Show/hide
Query:  LTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHAVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRI
        LTLM +  S RF+A+LQ+  EFF  F  DE  H    LE FY++M +ME++ ++ M+FTL   L  V LTF+   S  +P++   +LD LP ++++   I
Subjt:  LTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHAVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRI

Query:  DYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
        DY  FVSIDS+DF+R+VLE+  HS     ++S+ KFS   KEI+ TKEER+CIIG  +E K + +
Subjt:  DYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

XP_023006014.1 uncharacterized protein LOC111498891 [Cucurbita maxima]1.1e-3145.23Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
        MLMFRLD F  LL +  +L  V    +IKST  TLTL +   +  F+A LQM  EFFN FY D+  H R  L+   ++M +MEL+ +S M+F L   L  
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA

Query:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
        V LTF++   G +P +  R+LD+LP +V++  +IDY  FVSIDS DF+RV+LE++A+S     +DS+ KFS  + EI+FTKEER+ IIG   E +  ++
Subjt:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

XP_023548338.1 uncharacterized protein LOC111807006 [Cucurbita pepo subsp. pepo]2.1e-3044.22Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
        ML FRLD F+ LL +  +L  V    +IKST  TLTL +   + RF+ ALQM  EFFN F+ D+T   R  L+   ++M +MEL+ +S M+F +   L  
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA

Query:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
        V LTF++   G +P +  R+LD+LP +V+   +IDY  FVSIDS DF+RV+LE++A+S     +DS  KFS  ++EI+FTKEER+ IIG   E +  ++
Subjt:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

TrEMBL top hitse value%identityAlignment
A0A0A0K9W8 Uncharacterized protein8.8e-3545.5Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTL-LPELH
        ML FR++  + LL  TPVL  +G  VDI+ +P  L+LML + SP F+A LQM++EFFNL+  D T   RFSL KFY  MY+MELQ +S M FT+ +  L 
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTL-LPELH

Query:  AVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
        +V+LTFE+ N+ ++     R+L +L Y +D    I+Y  FVSIDS+DF+R+  E+++ S     ++S   F N+NKEI F+KEE +C+IG   E + +R+
Subjt:  AVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

A0A1S3C901 uncharacterized protein LOC1034980072.0e-3444.5Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTL-LPELH
        +L FR++  ++LL  TPVL  +G  VDI+ +P  L+LMLT+ SP F+A LQ+S+E FN++  D T   RF++ +FY  MY+MEL+ +S M FT+ +  L 
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTL-LPELH

Query:  AVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
         +FLTF+D N  ++ R   R L +L Y +D    I+Y  F SIDSKDFK +V E ++ S     SDS+A+F   +KEI+FTKEE +C+IG   E + +R+
Subjt:  AVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

A0A1S4E5E3 uncharacterized protein LOC1035034253.1e-165100Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
        MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA

Query:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLR
        VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLR
Subjt:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLR

Query:  SQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITR
        SQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITR
Subjt:  SQISVQCDYAKLVNDESCVEKSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITR

Query:  VNVKAKLR
        VNVKAKLR
Subjt:  VNVKAKLR

A0A6J1KUR4 uncharacterized protein LOC1114988891.4e-2744.85Show/hide
Query:  LTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHAVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRI
        LTLM +  S RF+A+LQ+  EFF  F  DE  H    LE FY++M +ME++ ++ M+FTL   L  V LTF+   S  +P++   +LD LP ++++   I
Subjt:  LTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHAVFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRI

Query:  DYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
        DY  FVSIDS+DF+R+VLE+  HS     ++S+ KFS   KEI+ TKEER+CIIG  +E K + +
Subjt:  DYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

A0A6J1L0Z0 uncharacterized protein LOC1114988915.3e-3245.23Show/hide
Query:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA
        MLMFRLD F  LL +  +L  V    +IKST  TLTL +   +  F+A LQM  EFFN FY D+  H R  L+   ++M +MEL+ +S M+F L   L  
Subjt:  MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHA

Query:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW
        V LTF++   G +P +  R+LD+LP +V++  +IDY  FVSIDS DF+RV+LE++A+S     +DS+ KFS  + EI+FTKEER+ IIG   E +  ++
Subjt:  VFLTFEDYNSGQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAATGTTTAGGCTTGATGAATTTGCTCTTCTTTTGAAATCAACCCCTGTTCTTTGTCAAGTTGGTCTAACTGTTGATATCAAAAGCACACCCAAGACCTTGACTCT
AATGCTCACACACCATTCCCCTCGTTTCGTTGCTGCTCTCCAAATGTCCAATGAATTTTTCAACCTCTTTTACTGTGATGAGACTCTCCATTTAAGATTTTCCCTTGAAA
AATTTTATGTTCTTATGTACCAAATGGAACTCCAAGCTTATTCTTTAATGCACTTCACTCTTCTCCCAGAATTACACGCTGTCTTCCTTACATTTGAAGATTATAATTCA
GGTCAAAAACCAAGAATTACGACGCGCCAATTGGATATGTTACCTTACAAAGTGGACCAACAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTT
CAAACGTGTTGTTTTGGAAATAAGTGCTCATTCTTCAGATTCAGAAGCCAAGTTTTCTAATGAAAATAAGGAGATTATTTTTACCAAAGAGGAAAGAAAATGTATAATTG
GAGTGGCATCAGAGAGAAAAAGATATAGGTGGTTTGAACGAGGTCTGAGATCGCAAATATCAGTACAATGCGATTACGCAAAATTGGTGAACGATGAGTCATGCGTCGAG
AAAAGTTTTGGAGGATTGAAAAAGGCTAAGTTTCAGGTTATAGCAAGGAAGAAGAAGAAGAAGAAGAGAAGAAAAGTAGTGGAAGGTATACTAAACAGTCTAAACCTGCG
TTTAGCCAGGGATCGCATTGGAGCAAAGATCAAAAGCAAAAGTGCAATAATGGTGGCAAGAGACATTCGGGAGTTTGTATGCGAAGAAACATTATTTGTTTCCAATGCAA
CGAGATGGGGCATTACAAGAGTAAATGTCAAAGCAAAGCTAAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAATGTTTAGGCTTGATGAATTTGCTCTTCTTTTGAAATCAACCCCTGTTCTTTGTCAAGTTGGTCTAACTGTTGATATCAAAAGCACACCCAAGACCTTGACTCT
AATGCTCACACACCATTCCCCTCGTTTCGTTGCTGCTCTCCAAATGTCCAATGAATTTTTCAACCTCTTTTACTGTGATGAGACTCTCCATTTAAGATTTTCCCTTGAAA
AATTTTATGTTCTTATGTACCAAATGGAACTCCAAGCTTATTCTTTAATGCACTTCACTCTTCTCCCAGAATTACACGCTGTCTTCCTTACATTTGAAGATTATAATTCA
GGTCAAAAACCAAGAATTACGACGCGCCAATTGGATATGTTACCTTACAAAGTGGACCAACAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTT
CAAACGTGTTGTTTTGGAAATAAGTGCTCATTCTTCAGATTCAGAAGCCAAGTTTTCTAATGAAAATAAGGAGATTATTTTTACCAAAGAGGAAAGAAAATGTATAATTG
GAGTGGCATCAGAGAGAAAAAGATATAGGTGGTTTGAACGAGGTCTGAGATCGCAAATATCAGTACAATGCGATTACGCAAAATTGGTGAACGATGAGTCATGCGTCGAG
AAAAGTTTTGGAGGATTGAAAAAGGCTAAGTTTCAGGTTATAGCAAGGAAGAAGAAGAAGAAGAAGAGAAGAAAAGTAGTGGAAGGTATACTAAACAGTCTAAACCTGCG
TTTAGCCAGGGATCGCATTGGAGCAAAGATCAAAAGCAAAAGTGCAATAATGGTGGCAAGAGACATTCGGGAGTTTGTATGCGAAGAAACATTATTTGTTTCCAATGCAA
CGAGATGGGGCATTACAAGAGTAAATGTCAAAGCAAAGCTAAGGTAG
Protein sequenceShow/hide protein sequence
MLMFRLDEFALLLKSTPVLCQVGLTVDIKSTPKTLTLMLTHHSPRFVAALQMSNEFFNLFYCDETLHLRFSLEKFYVLMYQMELQAYSLMHFTLLPELHAVFLTFEDYNS
GQKPRITTRQLDMLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGVASERKRYRWFERGLRSQISVQCDYAKLVNDESCVE
KSFGGLKKAKFQVIARKKKKKKRRKVVEGILNSLNLRLARDRIGAKIKSKSAIMVARDIREFVCEETLFVSNATRWGITRVNVKAKLR