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MELO3C002985 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C002985
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr12:18581487..18582483
RNA-Seq ExpressionMELO3C002985
SyntenyMELO3C002985
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.6e-0778.38Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        RKNCSSGSKRK+GS+HYET+EVI+SA+EFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
KAA0063227.1 retrotransposon protein [Cucumis melo var. makuwa]7.0e-0881.08Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        RKNCSSGSKRK+GSEHYET+EVIRS +EFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-0986.49Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        R+NCSSGSKRKRGSEHYET+EVIRSAMEFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
KAA0067707.1 retrotransposon protein [Cucumis melo var. makuwa]7.0e-0881.08Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        R+NCSSGSKRKRGS+HYE +EVIRSAMEFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
TYK21967.1 RING-H2 finger protein ATL66 [Cucumis melo var. makuwa]1.6e-0778.38Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        RK CSSGSKRKRGSEHYET+E+I+SA+EFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI17.6e-0878.38Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        RKNCSSGSKRK+GS+HYET+EVI+SA+EFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
A0A5A7V8A4 Retrotransposon protein3.4e-0881.08Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        RKNCSSGSKRK+GSEHYET+EVIRS +EFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
A0A5A7VKJ5 Retrotransposon protein3.4e-0881.08Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        R+NCSSGSKRKRGS+HYE +EVIRSAMEFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
A0A5D3CT52 Retrotransposon protein3.1e-0986.49Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        R+NCSSGSKRKRGSEHYET+EVIRSAMEFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
A0A5D3DE65 RING-H2 finger protein ATL667.6e-0878.38Show/hide
Query:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
        RK CSSGSKRKRGSEHYET+E+I+SA+EFGNDQL+ +
Subjt:  RKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATGTTTGGAATACGTGCAGGACAAGCAAGTGAGAAAAAATTGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTGAACATTATGAAACCATAGAAGTGATCAGGAG
TGCAATGGAATTTGGAAATGATCAATTAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGAAACAGAGGTCGAATTGCGTGTTGAAGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATTCGTCATGAACACCGAAACACACATGGACTAAAGAGGAAGAAGCAAAACTTGTTGAGTGCTTGGTGGAATTGGTTTCAGCTGGGGGATGGAGGTCTAATAA
TGGGACATTTCGACCTGGGTACCTGGCCCAATTGCAATGAATGATGGCAGAGAAGTTTCCCGACACTAATATCCAAGGATCGCCGACAATAGATTATCGTGTGAAATCTC
TTAAAAAAACCTACCAAGCAATTGCAGAAATGAGGGGTCATCATGTAGTGGCTTTGGATGGAATGAAGAATTCCAATGCATCATCACAGAACGAGATTTGTTTGATAGTT
AGGTAAAGAGTCATCCTCCAGCCAAAGGCCTTCTACACATATCAGTTCCATATTATGATGATTTGTCCTATGTCTTCGACAAAGATCGGGCAATGGGAGCACGTTCAGAG
ACCTTTGCTGATGTAGGATCTAATGTGTCGAACATGTTTAATACATTCCAATGATGTATAGCCAAGGAGTGCATATGTCACCAGATGAGATGTTTGGAATACGTGCAGGA
CAAGCAAGTGAGAAAAAATTGTTCAAGTGGAAGTAAGAGGAAACGAGGTAGTGAACATTATGAAACCATAGAAGTGATCAGGAGTGCAATGGAATTTGGAAATGATCAAT
TAAGGCAATTGCAAATTGGCCAAAAGAGAAGCGTGAAACAGAGGTCGAATTGCGTGTTGAAGTTGTGAAACAACTGCAAGATATCCCTGAACTACAAAGCCAAGATAGGG
CAAAGCTTATGCAAATCCTATTCCGTAGTGTGGAGGCCATTGAGGGGTTCTTGTCGATTTCAACAAACTTATATTGGAGTATTGCAATATTCTCTTGCAAAATTAAGGTT
TGA
Protein sequenceShow/hide protein sequence
MRCLEYVQDKQVRKNCSSGSKRKRGSEHYETIEVIRSAMEFGNDQLRQLQIGQKRSVKQRSNCVLKL