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MELO3C003063 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C003063
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr08:27581262..27581690
RNA-Seq ExpressionMELO3C003063
SyntenyMELO3C003063
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040709.1 hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa]2.4e-3677.45Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+ LIEVRLKIRHNY   I AQINIT++K NIFTVQT+S+TEGRWFKERNANIHGSFTRQAAL+FNEFDFEA++YSFM F ATPP+K++KKPKK+ K+
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQ
        S+
Subjt:  SQ

KAA0047508.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]9.6e-4187Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+DLIEVRLKIRHNY  FIPAQINI +SKGNIFT+QTVSFTE RWFKERNANIH  FTRQAALEFNEFDFEAEKYSFMGFV TPP+KKDKK KK+LKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

KAA0063660.1 hypothetical protein E6C27_scaffold329G001750 [Cucumis melo var. makuwa]2.4e-1547.06Show/hide
Query:  SDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE
        S+LIE +LKIR+NY  F+PA + I + +GN F +QT++ +EG+W  ERN  +HG+F RQAA  F+EF+ ++E++ F G  A  P+
Subjt:  SDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE

KAA0063733.1 hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa]1.2e-4899.02Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRKSDLIEVRLKIRHNYISFIPAQINI NSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQ
        SQ
Subjt:  SQ

TYK07346.1 hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]2.0e-3884.62Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE--KKDKKPKKSL
        MRK+DLIEVR KIRHNY  FIPAQI IT+SKGNIFTVQTVSFTEGR FKERNANIHGSFTRQAALEFNEFDF+AEKY FMGFVATPPE  KK+KK KK+ 
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE--KKDKKPKKSL

Query:  KHSQ
        KHS+
Subjt:  KHSQ

TrEMBL top hitse value%identityAlignment
A0A5A7THF9 Uncharacterized protein1.2e-3677.45Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+ LIEVRLKIRHNY   I AQINIT++K NIFTVQT+S+TEGRWFKERNANIHGSFTRQAAL+FNEFDFEA++YSFM F ATPP+K++KKPKK+ K+
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQ
        S+
Subjt:  SQ

A0A5A7V6K4 Uncharacterized protein6.0e-4999.02Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRKSDLIEVRLKIRHNYISFIPAQINI NSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

Query:  SQ
        SQ
Subjt:  SQ

A0A5A7V8Z8 Uncharacterized protein1.1e-1547.06Show/hide
Query:  SDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE
        S+LIE +LKIR+NY  F+PA + I + +GN F +QT++ +EG+W  ERN  +HG+F RQAA  F+EF+ ++E++ F G  A  P+
Subjt:  SDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE

A0A5D3CAI5 Uncharacterized protein9.7e-3984.62Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE--KKDKKPKKSL
        MRK+DLIEVR KIRHNY  FIPAQI IT+SKGNIFTVQTVSFTEGR FKERNANIHGSFTRQAALEFNEFDF+AEKY FMGFVATPPE  KK+KK KK+ 
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPE--KKDKKPKKSL

Query:  KHSQ
        KHS+
Subjt:  KHSQ

A0A5D3DT94 Putative amidohydrolase ytcJ4.6e-4187Show/hide
Query:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH
        MRK+DLIEVRLKIRHNY  FIPAQINI +SKGNIFT+QTVSFTE RWFKERNANIH  FTRQAALEFNEFDFEAEKYSFMGFV TPP+KKDKK KK+LKH
Subjt:  MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAATCAGATCTTATTGAAGTCAGACTGAAGATCAGACACAACTACATAAGCTTCATACCAGCACAAATTAACATTACGAATAGTAAAGGTAACATTTTC
ACAGTCCAAACAGTTTCTTTCACTGAAGGAAGATGGTTCAAAGAAAGAAATGCAAACATACACGGATCTTTCACTAGACAAGCCGCTTTGGAATTTAATGAATTT
GATTTTGAGGCTGAAAAATACTCTTTCATGGGTTTTGTTGCCACACCACCAGAGAAGAAAGATAAGAAGCCAAAGAAATCTCTCAAACACAGCCAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACCAAGCTATAGAGGATGGAAAAGCTTCAGAGGACTACCCTTAATCGCTTGGAACATGAACTCCTACAGATAGATTGGAGACGCATGTGGAGGTTTAGTG
GAAGTTTCAAAATCAACAATGAGGAAATCAGATCTTATTGAAGTCAGACTGAAGATCAGACACAACTACATAAGCTTCATACCAGCACAAATTAACATTACGAAT
AGTAAAGGTAACATTTTCACAGTCCAAACAGTTTCTTTCACTGAAGGAAGATGGTTCAAAGAAAGAAATGCAAACATACACGGATCTTTCACTAGACAAGCCGCT
TTGGAATTTAATGAATTTGATTTTGAGGCTGAAAAATACTCTTTCATGGGTTTTGTTGCCACACCACCAGAGAAGAAAGATAAGAAGCCAAAGAAATCTCTCAAA
CACAGCCAG
Protein sequenceShow/hide protein sequence
MRKSDLIEVRLKIRHNYISFIPAQINITNSKGNIFTVQTVSFTEGRWFKERNANIHGSFTRQAALEFNEFDFEAEKYSFMGFVATPPEKKDKKPKKSLKHSQ