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MELO3C003167.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C003167.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationchr08:31841723..31842148
RNA-Seq ExpressionMELO3C003167.jh1
SyntenyMELO3C003167.jh1
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649549.1 hypothetical protein Csa_018168, partial [Cucumis sativus]1.12e-4482.65Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVG
        MS  KDK GIY+EGGNTSTTDSNMF+GSSYGGWGWDWTFSTVGDTVNG  G NSLEVGDGNGGL GG GGGGS  SIHET CG GD GG GVS+HGVG
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVG

KAG6595345.1 hypothetical protein SDJN03_11898, partial [Cucurbita argyrosperma subsp. sororia]6.51e-1443.85Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GLAGGNGGGGSGVSI
        + R  K G Y+EGGN      D   + G++      YGGWGWDWTFS+VGDT NG G G    +VG G G               G+  GNG G +G S 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GLAGGNGGGGSGVSI

Query:  HETGCGGGD---------SGGRGVSEHGVGVSSHVDGGGHSYGGG--------GTSSNDHGGGGS-----GGGGFSDFGG-GGSSIW
        HE G GGG           GG  VS+HG G S H+DGG  ++GGG        G +S DHGGGG      GGGG  DFGG GGSS W
Subjt:  HETGCGGGD---------SGGRGVSEHGVGVSSHVDGGGHSYGGG--------GTSSNDHGGGGS-----GGGGFSDFGG-GGSSIW

XP_008450026.1 PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo]4.97e-8297.16Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MSKRKDKIGIYLEGGNTSTTDSNMFTG+SYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGG+ GGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
        SHVDGG HSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
Subjt:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW

XP_022931867.1 glycine-rich protein 23-like [Cucurbita moschata]7.10e-1241.58Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GLAGGNGGGGSGVSI
        + R  K G Y+EGGN      D   + G++      YGGWGWDWTFS+VGDT NG G G    +VG G G               G+  GNG G +G S 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GLAGGNGGGGSGVSI

Query:  HETG------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGG--------GTSSNDHGGGGS------GGGGFSDFGGGGSSIW
        HE G            CGGG   G  VS+ G G S H+DGG  ++GGG        G +S DHGGGG       GGGG+   GGGGSS W
Subjt:  HETG------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGG--------GTSSNDHGGGGS------GGGGFSDFGGGGSSIW

XP_022966633.1 loricrin-like [Cucurbita maxima]3.05e-1241.71Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGLAGGNGGGGSGVSIHET
        + R  K G Y+EGGN      D   + G++      YGGWGWDWTFS+VGDT NG         GG    EVG      G G   G   G G+G S HE 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGLAGGNGGGGSGVSIHET

Query:  G------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGGGTS--------SNDHGGGGSG-------GGGFSDFGGGGSSI
        G            CGGG   G  VS+HG G S H+DGG  ++GGG +S        S+DHGGGG G       GGG SD+GGGG   
Subjt:  G------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGGGTS--------SNDHGGGGSG-------GGGFSDFGGGGSSI

TrEMBL top hitse value%identityAlignment
A0A0A0KXB6 Uncharacterized protein1.73e-6170.76Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MS  KDK GIY+EGGNTSTTDSNMF+GSSYGGWGWDWTFSTVGDTVNG  G NSLEVGDGNGGL GG GGGGS  SIHET CG GD GG GVS+HGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGG------------------------------FSDFGGGGSSIW
        SHVDGGG SYGGGGTSSND GGGG GGGG                              FSDFGGGGSSIW
Subjt:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGG------------------------------FSDFGGGGSSIW

A0A1S3BNC1 glycine-rich cell wall structural protein 1.0-like2.40e-8297.16Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MSKRKDKIGIYLEGGNTSTTDSNMFTG+SYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGG+ GGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
        SHVDGG HSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
Subjt:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW

A0A5A7TNP5 Glycine-rich cell wall structural protein 1.0-like2.40e-8297.16Show/hide
Query:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
        MSKRKDKIGIYLEGGNTSTTDSNMFTG+SYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGG+ GGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS
Subjt:  MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVS

Query:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
        SHVDGG HSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW
Subjt:  SHVDGGGHSYGGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW

A0A6J1EUX9 glycine-rich protein 23-like3.44e-1241.58Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GLAGGNGGGGSGVSI
        + R  K G Y+EGGN      D   + G++      YGGWGWDWTFS+VGDT NG G G    +VG G G               G+  GNG G +G S 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGEG-GENSLEVGDGNG---------------GLAGGNGGGGSGVSI

Query:  HETG------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGG--------GTSSNDHGGGGS------GGGGFSDFGGGGSSIW
        HE G            CGGG   G  VS+ G G S H+DGG  ++GGG        G +S DHGGGG       GGGG+   GGGGSS W
Subjt:  HETG------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGG--------GTSSNDHGGGGS------GGGGFSDFGGGGSSIW

A0A6J1HSN5 loricrin-like1.48e-1241.71Show/hide
Query:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGLAGGNGGGGSGVSIHET
        + R  K G Y+EGGN      D   + G++      YGGWGWDWTFS+VGDT NG         GG    EVG      G G   G   G G+G S HE 
Subjt:  SKRKDKIGIYLEGGNTS--TTDSNMFTGSS------YGGWGWDWTFSTVGDTVNGE--------GGENSLEVGD-----GNGGLAGGNGGGGSGVSIHET

Query:  G------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGGGTS--------SNDHGGGGSG-------GGGFSDFGGGGSSI
        G            CGGG   G  VS+HG G S H+DGG  ++GGG +S        S+DHGGGG G       GGG SD+GGGG   
Subjt:  G------------CGGGDSGGRGVSEHGVGVSSHVDGGGHSYGGGGTS--------SNDHGGGGSG-------GGGFSDFGGGGSSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAAGAGAAAAGATAAAATTGGAATATATCTCGAAGGTGGAAATACAAGTACAACAGACAGCAATATGTTTACTGGCAGTAGTTATGGAGGTTGGGGTTGGGATTG
GACTTTCAGCACTGTCGGAGATACAGTCAACGGTGAAGGTGGCGAGAATAGTCTTGAGGTTGGAGATGGAAATGGTGGCCTTGCTGGAGGCAACGGCGGAGGTGGCAGTG
GAGTAAGTATTCATGAGACAGGTTGTGGTGGAGGTGATAGCGGAGGTAGAGGGGTTTCTGAACATGGAGTTGGTGTGAGTTCTCATGTGGATGGAGGAGGTCATAGTTAT
GGAGGCGGAGGAACAAGTTCTAATGATCACGGCGGAGGTGGAAGTGGAGGTGGAGGGTTTTCTGATTTTGGAGGGGGAGGATCATCTATTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTAAGAGAAAAGATAAAATTGGAATATATCTCGAAGGTGGAAATACAAGTACAACAGACAGCAATATGTTTACTGGCAGTAGTTATGGAGGTTGGGGTTGGGATTG
GACTTTCAGCACTGTCGGAGATACAGTCAACGGTGAAGGTGGCGAGAATAGTCTTGAGGTTGGAGATGGAAATGGTGGCCTTGCTGGAGGCAACGGCGGAGGTGGCAGTG
GAGTAAGTATTCATGAGACAGGTTGTGGTGGAGGTGATAGCGGAGGTAGAGGGGTTTCTGAACATGGAGTTGGTGTGAGTTCTCATGTGGATGGAGGAGGTCATAGTTAT
GGAGGCGGAGGAACAAGTTCTAATGATCACGGCGGAGGTGGAAGTGGAGGTGGAGGGTTTTCTGATTTTGGAGGGGGAGGATCATCTATTTGGTGA
Protein sequenceShow/hide protein sequence
MSKRKDKIGIYLEGGNTSTTDSNMFTGSSYGGWGWDWTFSTVGDTVNGEGGENSLEVGDGNGGLAGGNGGGGSGVSIHETGCGGGDSGGRGVSEHGVGVSSHVDGGGHSY
GGGGTSSNDHGGGGSGGGGFSDFGGGGSSIW