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MELO3C003346 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C003346
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionDNA-directed RNA polymerase II subunit RPB2
Genome locationchr04:315510..316382
RNA-Seq ExpressionMELO3C003346
SyntenyMELO3C003346
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60447.1 hypothetical protein Csa_002577 [Cucumis sativus]5.8e-2293.33Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQT+ATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG+SK DSSSETP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
XP_004148372.3 uncharacterized protein LOC101212897 [Cucumis sativus]5.8e-2293.33Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQT+ATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG+SK DSSSETP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
XP_016903560.1 PREDICTED: uncharacterized protein LOC103503490 [Cucumis melo]2.4e-23100Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
XP_023553989.1 uncharacterized protein LOC111811404 [Cucurbita pepo subsp. pepo]7.1e-2093.22Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S SDSSS TPQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
XP_038888236.1 uncharacterized protein LOC120078095 [Benincasa hispida]1.8e-1888.71Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSD---SSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLI DLRRG S SD   SSSETPQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSD---SSSETPQ
TrEMBL top hitse value%identityAlignment
A0A0A0LIB2 Uncharacterized protein2.8e-2293.33Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQT+ATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG+SK DSSSETP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
A0A1S4E6G4 uncharacterized protein LOC1035034901.1e-23100Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
A0A5A7TAA3 Putative membrane lipoprotein1.1e-23100Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
A0A6J1F0E3 uncharacterized protein LOC1114380563.2e-1889.83Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S +DSSS  PQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
A0A6J1I859 uncharacterized protein LOC1114718138.5e-1991.53Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
        M KSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRG S +DSSS TPQ
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17085.1 Putative membrane lipoprotein3.0e-1670Show/hide
Query:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS
        M KSF+LIQT+A +G FSA+S WYGFMFGRESARK+LG LI++LRRG S SDS   TP S
Subjt:  MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAATCCTTCACTCTGATTCAGACAATTGCGACTGCCGGAGCCTTCTCTGCGATTTCATTCTGGTATGGTTTCATGTTTGGAAGAGAGTCCGCTCGTAAA
GACTTGGGAGATTTGATTCAAGATCTACGCCGAGGAGTCTCTAAATCCGATTCTTCTTCTGAAACTCCTCAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAATCCTTCACTCTGATTCAGACAATTGCGACTGCCGGAGCCTTCTCTGCGATTTCATTCTGGTATGGTTTCATGTTTGGAAGAGAGTCCGCTCGTAAA
GACTTGGGAGATTTGATTCAAGATCTACGCCGAGGAGTCTCTAAATCCGATTCTTCTTCTGAAACTCCTCAGTCTTGATTTGGTACCTTATGTCCTTTTCCTCGA
TACGCTTAGGTAATGATCTTGGATAGGACTGTGTTGGAGAAGTCTATTGTGGATTAATGAACGAGAAATTTCACCTTCTGGAACAAGGAGATCTGTAGTTTTTTA
TTTGAGGCGTTTTGTGAAGTATCGATTAACTTAGATATTTGGAACCCATATCGATTTTGTACACAGATCAAGGCGTTTTGTGGGTCACTCTTCAATCCTTCCATT
TCTTTTTTGTTATTCTCATCAAATTTGCAAATTTTATTTTAGATTTTTTCTTCACGTCGATGTCTTTTTCTATTTTGGACTCACTCTCTCTGAATTACGGTCGAT
CTTCTTCCATCTTTGATTCCAGAAAGAGACCAAACCAAGACGAATGAAATGGTTCACTTGAAACCGTGACATGATGTTATCGCTCCTCCAAGTCGTATATAAATG
TGTATGCAACACACATATCATATTCCAACAAATAGCAAAAATGTGACCCACCAATATTAGGCTACATTACACGTATATGTGCGCATAGATGATACATGTTTACGG
GTGCAACCGATCATCTTCAAAACGCGACAATTTTATAGCCGAAACTATTTAATTT
Protein sequenceShow/hide protein sequence
MGKSFTLIQTIATAGAFSAISFWYGFMFGRESARKDLGDLIQDLRRGVSKSDSSSETPQS