; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C003638 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C003638
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionreplication protein A 32 kDa subunit A-like
Genome locationchr04:2769302..2774239
RNA-Seq ExpressionMELO3C003638
SyntenyMELO3C003638
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0006260 - DNA replication (biological process)
GO:0006289 - nucleotide-excision repair (biological process)
GO:0000781 - chromosome, telomeric region (cellular component)
GO:0005662 - DNA replication factor A complex (cellular component)
GO:0035861 - site of double-strand break (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
IPR012340 - Nucleic acid-binding, OB-fold
IPR014646 - Replication factor A protein 2
IPR014892 - Replication protein A, C-terminal
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040260 - Replication factor A protein-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024504.1 Replication protein A 32 kDa subunit A [Cucurbita argyrosperma subsp. argyrosperma]2.1e-12882.09Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSS+QFDSGSGFTSSQT DSSSAK                         +RE+PGLVP TVKQISEASHSGEEKANF IN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTP+QNGSSGY T SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_004136317.1 replication protein A 32 kDa subunit A [Cucumis sativus]6.4e-13888.51Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSSTQFDS SGFTSSQTNDSSSAK                         SRESPGL+PVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITFTVDDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNLKG+GSTQLQTSD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTPVQNGS+GYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH+DELSQQLK+PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_008466326.1 PREDICTED: replication protein A 32 kDa subunit A-like [Cucumis melo]7.3e-14291.55Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSSTQFDSGSGFTSSQTNDSSSAK                         SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_022936562.1 replication protein A 32 kDa subunit A-like [Cucurbita moschata]8.4e-13082.77Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSS+QFDSGSGFTSSQTNDSSSAK                         +RE+PGLVP TVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTP+QNGSSGY T SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

XP_038897330.1 replication protein A 32 kDa subunit A-like [Benincasa hispida]8.1e-13385.81Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFS TQFDS SGFTSSQTNDSSSAK                         SRESPGLVPVTVKQISEASHSGEEKANFV+N VDITNV IVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLK+FQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNL GDG TQ Q+SD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTPVQNGSSG+ T SS IPSEQHTVDVKK+CDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

TrEMBL top hitse value%identityAlignment
A0A0A0LEG7 Uncharacterized protein3.1e-13888.51Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSSTQFDS SGFTSSQTNDSSSAK                         SRESPGL+PVTVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITFTVDDGTGTIGCKRWVNDTFDT QMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHF+ECIHDHLRNSKLQNLKG+GSTQLQTSD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTPVQNGS+GYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIH+DELSQQLK+PMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A1S3CR64 replication protein A 32 kDa subunit A-like3.5e-14291.55Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSSTQFDSGSGFTSSQTNDSSSAK                         SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1CUB8 replication protein A 32 kDa subunit A6.7e-11778.38Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSS+QFDSGSGFTSSQ  DS+SAK                         SRESPGLVPVTVKQISEA HSGEEKANFVIN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITF VDDGTG IGCKRWVNDTFDTKQM++IQDGMY+RVNGHLK+FQ N QIFAFSVRPVTN DEITFHF+ECIHD+LRNSKLQ L G  STQ Q+SD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        S V   VQ+GSSGY T SS + S QHTVDVKK+ D+LVLDYLQLPSSVAKE+GIHRDELSQQLKIP+EKILDSIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1F8S8 replication protein A 32 kDa subunit A-like4.1e-13082.77Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSS+QFDSGSGFTSSQTNDSSSAK                         +RE+PGLVP TVKQISEASHSGEEKANFVIN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTP+QNGSSGY T SS +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

A0A6J1IMU1 replication protein A 32 kDa subunit A-like1.9e-12781.54Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER
        MFSS+QFDSGSGFT SQTNDSSSAK                         +RE+PGLVP TVKQISEASHSGEEKANF IN VDITNVTIVGKVSEKAER
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAER

Query:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD
        NTDITF VDDGTG IGCKRWVNDTFDTKQM+EIQDGMY+RVNGHLK+FQSNKQIFAFSVRP+TNFDEITFHF+ECIH+HLRNSKLQNL G GSTQ Q+SD
Subjt:  NTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSD

Query:  SIVKTPVQNGSSGYHTTS--SAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        SIVKTP+QNGSSGY T S  S +PSEQHTVDVKK+CD+L+LDYLQLPSSVAKERGIHRDELSQQLKIPMEKIL+SIRSLEDEGLIYSTIDEFHFKSAA
Subjt:  SIVKTPVQNGSSGYHTTS--SAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

SwissProt top hitse value%identityAlignment
Q5Z8L1 Replication protein A 32 kDa subunit C1.1e-2342.75Show/hide
Query:  GLVPVTVKQISEA-----SHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS
        G VP TV  IS +     +  G     F I+ V+ TNV ++G+V     R+TD+ FT+DD TG I   RW+ D  DT+    IQ+G+YV+V  +L  FQ+
Subjt:  GLVPVTVKQISEA-----SHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS

Query:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRN--SKLQ
         KQ  A S+RP+ NF+E+  HF+EC+H HL +  SK+Q
Subjt:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRN--SKLQ

Q6H7J5 Replication protein A 32 kDa subunit B5.3e-4236.89Show/hide
Query:  SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS
        SR +  L+P+TVKQI +AS + ++K+NF +N ++++ V +VG++  K +R TD++FT+DDGTG +   RW ND+ DTK+M +IQ+G YV VNG LK FQ 
Subjt:  SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS

Query:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAK
         +Q+ A+SVR +TNF+++T HFL C+H HL  ++ ++     +     + ++ +  +    S     +S   + Q+T       D LVL+    P+ +  
Subjt:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAK

Query:  ERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKS
        + G+  D +S++L +P E +   I    D G +Y+TID+ H+KS
Subjt:  ERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKS

Q6K9U2 Replication protein A 32 kDa subunit A1.8e-4239.53Show/hide
Query:  FSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHS---GEEKANFVINDVDITNVTIVGKVSEKA
        FS     S S FTSSQ          ++DS T S               SR +   +P+TVKQISEA  S   GE+ A FV++ V+  NV +VG VS K 
Subjt:  FSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHS---GEEKANFVINDVDITNVTIVGKVSEKA

Query:  ERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQT
        ERNTD++FT+DDGTG +   RWVND  D+ +   +Q+GMYV V G LK  Q  K+  AF++RPVT+++E+T HF++C+  HL N+K Q +     T    
Subjt:  ERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQT

Query:  SDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDV----KKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKS
          S + +   NG S   T +S   +    + V    K   +  VL+  + P++V  E G+H DE+ ++ ++P  KI  +I  L D G IYSTIDE H+KS
Subjt:  SDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDV----KKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKS

Query:  A
        A
Subjt:  A

Q8LFJ8 Replication protein A 32 kDa subunit B1.5e-4440.16Show/hide
Query:  SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS
        +R+   L+P+T+KQ+S AS +GE  +NF I+ VDI  V IVG++S    R T + F VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK+FQ 
Subjt:  SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS

Query:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSS
         + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  ++  D +T + Q   S + TP +   +G    S+  P++ +  D      + VL+YL  P  
Subjt:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSS

Query:  VAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        +  E G+H D ++++L+IP+ ++ +++  L ++G IYST+DE  FKS A
Subjt:  VAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

Q9ZQ19 Replication protein A 32 kDa subunit A1.0e-6144.26Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE-
        MFSS+QF+  SGF+      S  ++   S S T                 +R+  GLVPVTVKQI+E   S  EK+  VIN + +TNV++VG V +K E 
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE-

Query:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTS
        + T++ FT+DDGTG I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH++ECIH + +NS+ Q  +    TQ    
Subjt:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTS

Query:  DSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK
           V T  Q GS+    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  DSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK

Arabidopsis top hitse value%identityAlignment
AT2G24490.1 replicon protein A27.2e-6344.26Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE-
        MFSS+QF+  SGF+      S  ++   S S T                 +R+  GLVPVTVKQI+E   S  EK+  VIN + +TNV++VG V +K E 
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE-

Query:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTS
        + T++ FT+DDGTG I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH++ECIH + +NS+ Q  +    TQ    
Subjt:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTS

Query:  DSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK
           V T  Q GS+    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  DSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK

AT2G24490.2 replicon protein A27.2e-6344.26Show/hide
Query:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE-
        MFSS+QF+  SGF+      S  ++   S S T                 +R+  GLVPVTVKQI+E   S  EK+  VIN + +TNV++VG V +K E 
Subjt:  MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE-

Query:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTS
        + T++ FT+DDGTG I CKRWV++TFD ++ME ++DG YVR++GHLK FQ   Q+  FSVRP+ +F+E+TFH++ECIH + +NS+ Q  +    TQ    
Subjt:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTS

Query:  DSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK
           V T  Q GS+    T  +  + S+ +  + +K+ D+++LDYL+ P+  A+++GIH DE++QQLKIP  K+   ++SLE +GLIYSTIDE+HFK
Subjt:  DSIVKTPVQNGSSGYHTT--SSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFK

AT3G02920.1 Replication protein A, subunit RPA321.0e-4540.16Show/hide
Query:  SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS
        +R+   L+P+T+KQ+S AS +GE  +NF I+ VDI  V IVG++S    R T + F VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK+FQ 
Subjt:  SRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQS

Query:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSS
         + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  ++  D +T + Q   S + TP +   +G    S+  P++ +  D      + VL+YL  P  
Subjt:  NKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QLQTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSS

Query:  VAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        +  E G+H D ++++L+IP+ ++ +++  L ++G IYST+DE  FKS A
Subjt:  VAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA

AT3G02920.2 Replication protein A, subunit RPA321.8e-4538.33Show/hide
Query:  SGSGFTSSQT-----NDSSSAKLESSDSKTESANLNCFQFAGTMIGTS----RESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE
        +G GF  SQ        SSS K+  SDS+         +F+G     S    R+   L+P+T+KQ+S AS +GE  +NF I+ VDI  V IVG++S    
Subjt:  SGSGFTSSQT-----NDSSSAKLESSDSKTESANLNCFQFAGTMIGTS----RESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAE

Query:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QL
        R T + F VDDGTG + C RW +   +T++ME ++ GMYVR++GHLK+FQ  + +  FSVRPVT+F+EI  HF EC++ H+ N+KL+  ++  D +T + 
Subjt:  RNTDITFTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQ--NLKGDGST-QL

Query:  QTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA
        Q   S + TP +   +G    S+  P++ +  D      + VL+YL  P  +  E G+H D ++++L+IP+ ++ +++  L ++G IYST+DE  FKS A
Subjt:  QTSDSIVKTPVQNGSSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCCAGCACCCAGTTTGATTCCGGCAGCGGATTTACCTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGCTAGAATCCAGTGACAGCAAAACTGAAAGC
GCAAACCTAAATTGTTTTCAGTTCGCCGGAACGATGATCGGAACGAGTCGAGAATCTCCGGGCTTGGTTCCGGTAACTGTGAAACAGATCAGTGAAGCTTCACAT
TCTGGCGAAGAGAAGGCCAACTTTGTAATCAACGACGTCGATATAACAAACGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACA
TTCACTGTAGACGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTACGTTCGG
GTGAATGGGCATTTGAAAATGTTCCAAAGCAACAAGCAAATATTTGCATTCTCCGTTAGGCCTGTTACAAACTTTGATGAAATTACCTTCCACTTTCTTGAATGC
ATACATGACCACTTGCGGAATTCCAAGTTACAGAATCTCAAAGGCGATGGATCAACACAGCTCCAAACCTCAGATTCAATTGTGAAGACTCCAGTGCAGAATGGC
TCGAGTGGATATCATACAACATCTTCAGCAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCC
TCCAGCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATACTGGATTCCATAAGGTCTCTTGAAGATGAA
GGTTTGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAG
mRNA sequenceShow/hide mRNA sequence
GAAAAGCTTCTACTTCCATATGTTCATATTTGCTCCGTAATTCTCTTCCATTTCTCCATTGTTAATTGTTCATCGCGTTATTACTCACAGGATTTTTAAGTATGT
TCTCCAGCACCCAGTTTGATTCCGGCAGCGGATTTACCTCTTCTCAGACCAATGACTCCTCTTCAGCGAAGCTAGAATCCAGTGACAGCAAAACTGAAAGCGCAA
ACCTAAATTGTTTTCAGTTCGCCGGAACGATGATCGGAACGAGTCGAGAATCTCCGGGCTTGGTTCCGGTAACTGTGAAACAGATCAGTGAAGCTTCACATTCTG
GCGAAGAGAAGGCCAACTTTGTAATCAACGACGTCGATATAACAAACGTTACAATCGTTGGAAAGGTCTCTGAGAAAGCTGAAAGGAATACGGACATCACATTCA
CTGTAGACGATGGAACAGGAACAATTGGTTGCAAAAGATGGGTAAACGACACTTTTGACACCAAGCAAATGGAGGAAATACAAGATGGAATGTACGTTCGGGTGA
ATGGGCATTTGAAAATGTTCCAAAGCAACAAGCAAATATTTGCATTCTCCGTTAGGCCTGTTACAAACTTTGATGAAATTACCTTCCACTTTCTTGAATGCATAC
ATGACCACTTGCGGAATTCCAAGTTACAGAATCTCAAAGGCGATGGATCAACACAGCTCCAAACCTCAGATTCAATTGTGAAGACTCCAGTGCAGAATGGCTCGA
GTGGATATCATACAACATCTTCAGCAATACCATCTGAGCAGCACACTGTTGATGTTAAAAAGAGCTGTGATGAATTGGTTCTCGACTATCTGCAGCTGCCCTCCA
GCGTTGCAAAAGAAAGAGGGATACACAGAGATGAACTTTCCCAACAACTGAAAATTCCAATGGAGAAAATACTGGATTCCATAAGGTCTCTTGAAGATGAAGGTT
TGATATATTCCACCATAGATGAGTTTCATTTCAAGTCTGCTGCATAGAACTAATCATGACTTTATTAGTTTCTTTTTTTTTGGTTGCATTGCTATGCGATAGGTG
TGGTTTAGACAGACATATACTGCTTTGCTTGAATTTAAGCATCTCTCTTTTACTTGCTTGTTACATGTGTATATGTATTTTGAAGCTTCTTTCTCCTAATTCTAA
TATTATTAGATTAAGCCTTAAGCACCAATTATATCCCAAACGATACACCAATTTTAACTTTTAACTTTGGTGATAGTTGTTTTGTATAATAAAATATTAGTTGTT
GATTATTTTTCATTTTTCTAAAAAAAAGATTAAATTTT
Protein sequenceShow/hide protein sequence
MFSSTQFDSGSGFTSSQTNDSSSAKLESSDSKTESANLNCFQFAGTMIGTSRESPGLVPVTVKQISEASHSGEEKANFVINDVDITNVTIVGKVSEKAERNTDIT
FTVDDGTGTIGCKRWVNDTFDTKQMEEIQDGMYVRVNGHLKMFQSNKQIFAFSVRPVTNFDEITFHFLECIHDHLRNSKLQNLKGDGSTQLQTSDSIVKTPVQNG
SSGYHTTSSAIPSEQHTVDVKKSCDELVLDYLQLPSSVAKERGIHRDELSQQLKIPMEKILDSIRSLEDEGLIYSTIDEFHFKSAA