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MELO3C003796 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C003796
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr04:4458965..4462431
RNA-Seq ExpressionMELO3C003796
SyntenyMELO3C003796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.5e-3462.5Show/hide
Query:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAP--------IRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSS
        EDDL+N+A GSSS GDNTGSSSQ  +T T RR AQS+LLELE HVA+NGRIPMTIAP         RCSLQPGDR VRAKDIS    S     E+ + ++
Subjt:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAP--------IRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSS

Query:  MVTF-----RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM
           F     RHFKKY+D EEARAN PN LVGR EDWHF C+HY+
Subjt:  MVTF-----RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM

KAA0060501.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.9e-3446.46Show/hide
Query:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHV----------RAKDISIAALSGWTLAENTLR
        EDD DN+A GSSS GDN   SS   +T T RR AQSRLL+LE HVA NGRIPM IAP   + +P   HV            K   +  L    +A   + 
Subjt:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHV----------RAKDISIAALSGWTLAENTLR

Query:  SSM------VTF--------RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM---------------CIPGIIIAAGQSCFYNDSTSSLSKKGSRSI
          M       TF        RHFKKYN+ EEARANPPN LVGR EDWHFL DHY+                      ++G S FYNDS SSL +KGSRSI
Subjt:  SSM------VTF--------RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM---------------CIPGIIIAAGQSCFYNDSTSSLSKKGSRSI

Query:  VWSCFEKHMFESG-RPCRRSQRMCRI
        VW+C EKH FE G R   R    C++
Subjt:  VWSCFEKHMFESG-RPCRRSQRMCRI

KAA0062115.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.3e-3841.37Show/hide
Query:  KGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCSSSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNG
        K R E+R  S S   + +     PCR    C  S   ++   +       EDDLD N+A GSSS GDNT  SS   +T T RR AQSRLLELE HVA+NG
Subjt:  KGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCSSSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNG

Query:  RIPMTIA--------------------------PIRC-----------SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTF-----RHFKKYNDLE
        RIPMTIA                          P+RC            +  GD + +   D +  A++     E+ + ++   F     RHFKKY+D E
Subjt:  RIPMTIA--------------------------PIRC-----------SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTF-----RHFKKYNDLE

Query:  EARANPPNVLVGRHEDWHFLCDHYMC-----IPGIIIAAGQSCFYNDSTSSLS----------KKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNS
        EARANPPN LVGR EDWHFLCDHY+            AA Q   YN S+ S S          +KGSRSIVW+ F K+ FE G  CRR  RM  IKCWNS
Subjt:  EARANPPNVLVGRHEDWHFLCDHYMC-----IPGIIIAAGQSCFYNDSTSSLS----------KKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNS

Query:  SPSLLKR
        + SL +R
Subjt:  SPSLLKR

KAA0063205.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.7e-8482.18Show/hide
Query:  MLCSSSKEDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSSM
        MLCSSSKEDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAP              K IS+            +R S 
Subjt:  MLCSSSKEDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSSM

Query:  VTFRHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNSSP
            HFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMC IKCWNSSP
Subjt:  VTFRHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNSSP

Query:  SL
        SL
Subjt:  SL

TYK04508.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.0e-3542.09Show/hide
Query:  ASGKTSEIRIIPDAIMVRRERWSILDVFVSVRRSPINLFQFCESQNQNKRVRKKGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCS
        ASG TS I   P +  V R+          VR+SP+N FQFCE QN+N+  +KKG  E          VV            R IMSY  +NFM      
Subjt:  ASGKTSEIRIIPDAIMVRRERWSILDVFVSVRRSPINLFQFCESQNQNKRVRKKGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCS

Query:  SSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIA--------------------------PIRC----------
           EDDLD N+A GSSS GDNT  SS   +T T RR AQSRLLELE HVA+NGRIPMTIA                          P+RC          
Subjt:  SSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIA--------------------------PIRC----------

Query:  -SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTFR-----HFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM
          +  GD +     D +  A++     E+ + ++   FR     HFKKY+D EEARANPPN LVGR EDWHFLCDHY+
Subjt:  -SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTFR-----HFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM

TrEMBL top hitse value%identityAlignment
A0A5A7T114 CACTA en-spm transposon protein7.4e-3562.5Show/hide
Query:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAP--------IRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSS
        EDDL+N+A GSSS GDNTGSSSQ  +T T RR AQS+LLELE HVA+NGRIPMTIAP         RCSLQPGDR VRAKDIS    S     E+ + ++
Subjt:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAP--------IRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSS

Query:  MVTF-----RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM
           F     RHFKKY+D EEARAN PN LVGR EDWHF C+HY+
Subjt:  MVTF-----RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM

A0A5A7V882 CACTA en-spm transposon protein6.5e-3941.37Show/hide
Query:  KGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCSSSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNG
        K R E+R  S S   + +     PCR    C  S   ++   +       EDDLD N+A GSSS GDNT  SS   +T T RR AQSRLLELE HVA+NG
Subjt:  KGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCSSSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNG

Query:  RIPMTIA--------------------------PIRC-----------SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTF-----RHFKKYNDLE
        RIPMTIA                          P+RC            +  GD + +   D +  A++     E+ + ++   F     RHFKKY+D E
Subjt:  RIPMTIA--------------------------PIRC-----------SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTF-----RHFKKYNDLE

Query:  EARANPPNVLVGRHEDWHFLCDHYMC-----IPGIIIAAGQSCFYNDSTSSLS----------KKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNS
        EARANPPN LVGR EDWHFLCDHY+            AA Q   YN S+ S S          +KGSRSIVW+ F K+ FE G  CRR  RM  IKCWNS
Subjt:  EARANPPNVLVGRHEDWHFLCDHYMC-----IPGIIIAAGQSCFYNDSTSSLS----------KKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNS

Query:  SPSLLKR
        + SL +R
Subjt:  SPSLLKR

A0A5D3BZR1 CACTA en-spm transposon protein4.3e-3542.09Show/hide
Query:  ASGKTSEIRIIPDAIMVRRERWSILDVFVSVRRSPINLFQFCESQNQNKRVRKKGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCS
        ASG TS I   P +  V R+          VR+SP+N FQFCE QN+N+  +KKG  E          VV            R IMSY  +NFM      
Subjt:  ASGKTSEIRIIPDAIMVRRERWSILDVFVSVRRSPINLFQFCESQNQNKRVRKKGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCS

Query:  SSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIA--------------------------PIRC----------
           EDDLD N+A GSSS GDNT  SS   +T T RR AQSRLLELE HVA+NGRIPMTIA                          P+RC          
Subjt:  SSKEDDLD-NLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIA--------------------------PIRC----------

Query:  -SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTFR-----HFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM
          +  GD +     D +  A++     E+ + ++   FR     HFKKY+D EEARANPPN LVGR EDWHFLCDHY+
Subjt:  -SLQPGD-RHVRAKDISIAALSGWTLAENTLRSSMVTFR-----HFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM

A0A5D3D4W5 CACTA en-spm transposon protein4.8e-3446.46Show/hide
Query:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHV----------RAKDISIAALSGWTLAENTLR
        EDD DN+A GSSS GDN   SS   +T T RR AQSRLL+LE HVA NGRIPM IAP   + +P   HV            K   +  L    +A   + 
Subjt:  EDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHV----------RAKDISIAALSGWTLAENTLR

Query:  SSM------VTF--------RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM---------------CIPGIIIAAGQSCFYNDSTSSLSKKGSRSI
          M       TF        RHFKKYN+ EEARANPPN LVGR EDWHFL DHY+                      ++G S FYNDS SSL +KGSRSI
Subjt:  SSM------VTF--------RHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYM---------------CIPGIIIAAGQSCFYNDSTSSLSKKGSRSI

Query:  VWSCFEKHMFESG-RPCRRSQRMCRI
        VW+C EKH FE G R   R    C++
Subjt:  VWSCFEKHMFESG-RPCRRSQRMCRI

A0A5D3DJ43 CACTA en-spm transposon protein2.3e-8482.18Show/hide
Query:  MLCSSSKEDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSSM
        MLCSSSKEDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAP              K IS+            +R S 
Subjt:  MLCSSSKEDDLDNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSSM

Query:  VTFRHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNSSP
            HFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMC IKCWNSSP
Subjt:  VTFRHFKKYNDLEEARANPPNVLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNSSP

Query:  SL
        SL
Subjt:  SL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTATGCGTCAGGGAAGACGTCGGAAATAAGGATCATTCCCGACGCTATTATGGTGCGTCGAGAAAGGTGGAGCATTCTCGACGTCTTCGTGAGCGTCAGGAGATC
CCCTATAAATTTATTTCAATTCTGTGAATCACAAAACCAAAACAAAAGAGTAAGAAAGAAAGGGAGAAACGAAAGACGAACCATTTCACCGTCATGCCCTACTGTTGTGG
CCTTCGCCGCCCTCCGTCCTTGCCGCCATACATTGAGATGCATTATGTCATACCTACGTAATAATTTTATGAGAAAGATGTTATGTTCCTCGAGTAAAGAGGACGATTTA
GATAACCTTGCGAGAGGGTCATCGTCCGCGGGTGACAATACGGGGTCGTCTTCTCAACCACCTTCGACTTCAACTTCTAGAAGACATGCGCAATCTCGACTTTTAGAGTT
GGAGCATCACGTTGCAGTCAATGGGCGCATTCCGATGACGATCGCCCCTATACGTTGTTCGCTTCAGCCAGGCGATAGACATGTGCGTGCAAAAGATATTTCAATCGCTG
CCTTAAGTGGATGGACGTTGGCAGAGAATACATTGAGGTCATCAATGGTGACCTTTAGACACTTCAAAAAGTACAACGACCTCGAGGAGGCTCGTGCCAACCCACCAAAT
GTATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGTGCATTCCAGGTATAATCATAGCAGCAGGTCAAAGTTGTTTCTACAACGACAGCACAAG
CTCGCTGAGTAAAAAGGGAAGTCGATCGATCGTGTGGAGTTGTTTCGAGAAACACATGTTTGAGTCGGGACGTCCATGTCGCAGGTCGCAGAGGATGTGCAGAATTAAAT
GCTGGAACTCTAGTCCCAGCCTACTCAAAAGGCCTTGGTTAGGGACCCAAGCCGAAGGCCCGCAAGACGACGAGTGCAAGCAGCTCCACGACGTCATGGTCTCAATCGGC
CACAGAAAGAGAGATTCAAATACAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTATGCGTCAGGGAAGACGTCGGAAATAAGGATCATTCCCGACGCTATTATGGTGCGTCGAGAAAGGTGGAGCATTCTCGACGTCTTCGTGAGCGTCAGGAGATC
CCCTATAAATTTATTTCAATTCTGTGAATCACAAAACCAAAACAAAAGAGTAAGAAAGAAAGGGAGAAACGAAAGACGAACCATTTCACCGTCATGCCCTACTGTTGTGG
CCTTCGCCGCCCTCCGTCCTTGCCGCCATACATTGAGATGCATTATGTCATACCTACGTAATAATTTTATGAGAAAGATGTTATGTTCCTCGAGTAAAGAGGACGATTTA
GATAACCTTGCGAGAGGGTCATCGTCCGCGGGTGACAATACGGGGTCGTCTTCTCAACCACCTTCGACTTCAACTTCTAGAAGACATGCGCAATCTCGACTTTTAGAGTT
GGAGCATCACGTTGCAGTCAATGGGCGCATTCCGATGACGATCGCCCCTATACGTTGTTCGCTTCAGCCAGGCGATAGACATGTGCGTGCAAAAGATATTTCAATCGCTG
CCTTAAGTGGATGGACGTTGGCAGAGAATACATTGAGGTCATCAATGGTGACCTTTAGACACTTCAAAAAGTACAACGACCTCGAGGAGGCTCGTGCCAACCCACCAAAT
GTATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGTGCATTCCAGGTATAATCATAGCAGCAGGTCAAAGTTGTTTCTACAACGACAGCACAAG
CTCGCTGAGTAAAAAGGGAAGTCGATCGATCGTGTGGAGTTGTTTCGAGAAACACATGTTTGAGTCGGGACGTCCATGTCGCAGGTCGCAGAGGATGTGCAGAATTAAAT
GCTGGAACTCTAGTCCCAGCCTACTCAAAAGGCCTTGGTTAGGGACCCAAGCCGAAGGCCCGCAAGACGACGAGTGCAAGCAGCTCCACGACGTCATGGTCTCAATCGGC
CACAGAAAGAGAGATTCAAATACAAGCTAAACTTGATCAAGCTTTGGAACGGATTAAATTGCAAGATAGAAATTACCAAGCATTAGCTTCAGAAATGGAACAAATGCGGA
AGCTGATACAGGACATGACTCGAGCACAGCAAGGACCAGCACATTATCCTTAG
Protein sequenceShow/hide protein sequence
MLYASGKTSEIRIIPDAIMVRRERWSILDVFVSVRRSPINLFQFCESQNQNKRVRKKGRNERRTISPSCPTVVAFAALRPCRHTLRCIMSYLRNNFMRKMLCSSSKEDDL
DNLARGSSSAGDNTGSSSQPPSTSTSRRHAQSRLLELEHHVAVNGRIPMTIAPIRCSLQPGDRHVRAKDISIAALSGWTLAENTLRSSMVTFRHFKKYNDLEEARANPPN
VLVGRHEDWHFLCDHYMCIPGIIIAAGQSCFYNDSTSSLSKKGSRSIVWSCFEKHMFESGRPCRRSQRMCRIKCWNSSPSLLKRPWLGTQAEGPQDDECKQLHDVMVSIG
HRKRDSNTS