CuGenDBv2

Gene ID	MELO3C004111
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	nuclear pore complex protein NUP43
Genome location	chr05:24153191..24159044
RNA-Seq Expression	MELO3C004111
Synteny	MELO3C004111
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-190

91.98

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGT FAWDLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_004144716.1 nuclear pore complex protein NUP43 [Cucumis sativus]

2.7e-199

96.56

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNPLDI PHSTW+SPSRVSSLKTSQLH+NPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_008452472.1 PREDICTED: nuclear pore complex protein NUP43 [Cucumis melo]

5.0e-206

100

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
        GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

4.5e-191

92.26

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

XP_038889924.1 nuclear pore complex protein NUP43 [Benincasa hispida]

5.4e-192

93.14

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWL  LS F+R AVIALFDSD DSSSIEIHSLTQ PLDIAPHSTW SPSRVSSLKTSQL+QNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPMEA+LDSELSVPEKMLHD PISCVDVMD GGECLTVSEDGRVNLVS+GESGLNY RIFDSNGLVSY AVKWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVH IDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
        GILTSIEQGK+PV+LLAEPCAINGFDIDR HPSEVICNLEWES+AILSRS
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJ46 Uncharacterized protein

1.3e-199

96.56

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI SPQQQPQIHRFPQFKYVDGVRWLPPLSAF+RFAVIALFDSD DSSSIEIHSLTQNPLDI PHSTW+SPSRVSSLKTSQLH+NPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPISCVDVMD GGECLTVSEDGRV+LVSVGESGL+YRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKA+WASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEG+KTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GILTSIEQGKEPVELLAEPCAINGFDI+RQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A1S3BTA6 nuclear pore complex protein NUP43

2.4e-206

100

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
        GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS

A0A5D3BAS9 Nuclear pore complex protein NUP43

2.4e-206

100

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
        GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRS

A0A6J1FCG9 nuclear pore complex protein NUP43

2.2e-191

92.26

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKYVDGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEG+KTSN SPCESEVWEVHYDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GI+TSIEQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1HYH3 nuclear pore complex protein NUP43

1.6e-189

91.12

Show/hide

Query:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV
        MAI+SPQQQPQIHRFPQFKY+DGVRWLPPLSAF RFAV+ALFDSD DSSSIEIHSLTQNPLD+AP S W SPSR+SSLKTSQ +QNPLVFASTYTGSLHV
Subjt:  MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHV

Query:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG
        LSVEPM+ASLDSELSVPEK+LHD PISCVDVMDSGGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY A KWASPTEF TGGCGFSLQWWDQRKPG
Subjt:  LSVEPMEASLDSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPG

Query:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED
        GAV QFK DWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLEG+KTSN SPCESEVWEV YDPYIKSGN+GGMSS+QILPAMICSED
Subjt:  GAVSQFKADWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSED

Query:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        GI+TSIEQGK+PVELLAEPCAINGFDID QHPSEVICNLEWESVAILSR
Subjt:  GILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

7.0e-110

58.73

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLD-------IAPHSTWVSPSRVSSLKTSQL-----HQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI SL  NP         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLD-------IAPHSTWVSPSRVSSLKTSQL-----HQNPLVFASTY

Query:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDSGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ
        +GSLHVL ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEFVTGG GF LQ
Subjt:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDSGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LSG+  ++  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS

Query:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SR
Subjt:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

4.9e-111

58.73

Show/hide

Query:  QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLD-------IAPHSTWVSPSRVSSLKTSQL-----HQNPLVFASTY
        Q   Q+HR PQ KYVDGVRWLP  SA  RF   A +D+D DSSSIEI SL  NP         I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLD-------IAPHSTWVSPSRVSSLKTSQL-----HQNPLVFASTY

Query:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDSGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ
        +GSLHVL ++ +E +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y AVKWASPTEFVTGG GF LQ
Subjt:  TGSLHVLSVEPMEASLDSELSVPE-KMLHDGPISCVDVMDSGGECLTVSEDGRVNLVS-VGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQ

Query:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS
         WDQRK G AVSQ K +W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLR  QQPI+LSG+  ++  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKADW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSS

Query:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        ++ILP M CSEDGIL  IEQG+EP+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SR
Subjt:  TQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

Sequences

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CDS sequence

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ATGGCGATCCTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTACCCGGTTTGC
CGTAATTGCCCTTTTCGACTCTGATTTTGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGGTTTCACCATCAA
GAGTATCTTCACTTAAAACCTCTCAACTCCACCAGAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAGCGTCGCTC
GACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATAGTGGAGGTGAGTGCCTGACTGTTTCGGAAGATGGACGGGT
GAATTTGGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCACCTACTGAGTTTGTGA
CTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCGATTGGGCGTCTGGTATAGTTCACTGCATTGATATC
CATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTAGAAGGGAC
CAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGATTTTACCTG
CTATGATCTGCTCTGAGGACGGGATTCTAACAAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTGACCGTCAA
CATCCATCAGAAGTAATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTCTCAAGATCTTGA

mRNA sequence

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ATGAACTTTAATAATAATAAAATACCCCTAAACCTAATATGGCCGGACCGGCGTCTCAAAAAGTTAAATTCCGACATCATTCATCATTTCAATCAAGCTCCCTTAATAAA
CCCTAACAATGGCGATCCTTAGTCCCCAACAGCAACCTCAAATCCACAGGTTCCCGCAATTCAAGTATGTTGATGGTGTTCGTTGGCTTCCACCACTCTCCGCATTTACC
CGGTTTGCCGTAATTGCCCTTTTCGACTCTGATTTTGACTCATCCTCCATTGAAATTCACTCCTTGACTCAAAATCCACTGGATATAGCTCCTCATTCGACATGGGTTTC
ACCATCAAGAGTATCTTCACTTAAAACCTCTCAACTCCACCAGAACCCTCTTGTTTTCGCTTCGACTTATACAGGTTCTCTTCATGTTTTATCTGTCGAGCCAATGGAAG
CGTCGCTCGACTCGGAGCTTTCGGTGCCGGAGAAGATGTTGCACGACGGACCTATTTCATGTGTCGATGTGATGGATAGTGGAGGTGAGTGCCTGACTGTTTCGGAAGAT
GGACGGGTGAATTTGGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTTGATAGTAATGGGTTGGTGTCGTATAACGCGGTGAAATGGGCATCACCTACTGA
GTTTGTGACTGGTGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGTGGAGCTGTTTCTCAGTTTAAGGCCGATTGGGCGTCTGGTATAGTTCACTGCA
TTGATATCCATCCATCGCGAAAGCATACTTGTTTGGCAGGGGGCTCTTTTGGTACTGTCTTTGCCTGGGATTTGAGGTCACAACAGCAGCCTATCATTCTTTCGGGTCTA
GAAGGGACCAAAACATCAAATCCTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCTTATATTAAGTCTGGCAATCTAGGTGGCATGTCATCTACACAGAT
TTTACCTGCTATGATCTGCTCTGAGGACGGGATTCTAACAAGTATTGAGCAAGGCAAGGAGCCTGTGGAACTGCTGGCAGAACCATGTGCAATTAATGGTTTCGACATTG
ACCGTCAACATCCATCAGAAGTAATATGTAACTTGGAGTGGGAATCCGTTGCCATCCTCTCAAGATCTTGATTTTCAGAATCAGAAGTCATCGTTTTTCCTAAATTCAGG
TTCCAATCCACTATATAAATTCCTTTAACAATTTAAGAAGTATCCTTAGCTTTCTATCTTCTTAGCTTTCTGTCTTCCATTGAGTGCATGCAATTTCTTAGTTTTAGGCT
CATGTAAATTTGGCTGTAGCTTTGTTTGTTTACCACATAATTGGAACTCAATTTTGATATGAATTTTCTTACTGGTCAGAGACCATATTAGGGGGATATTTATGATGTTG
TTTTGATTTGTATTTTATATGTATTTAACCTGTTCTCCATTCAACTCCTCAGCTTGTCGCTTTCACTTTTAATTTTTTATACCAAATAGAATAACTTTTTCTCCCAATAT
AATTTTACACAATGTAAAATACTTAATCTATATCGAATCTTTTTTTTATTGGGATTATTATTTGCTATTTCTGA

Protein sequence

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MAILSPQQQPQIHRFPQFKYVDGVRWLPPLSAFTRFAVIALFDSDFDSSSIEIHSLTQNPLDIAPHSTWVSPSRVSSLKTSQLHQNPLVFASTYTGSLHVLSVEPMEASL
DSELSVPEKMLHDGPISCVDVMDSGGECLTVSEDGRVNLVSVGESGLNYRRIFDSNGLVSYNAVKWASPTEFVTGGCGFSLQWWDQRKPGGAVSQFKADWASGIVHCIDI
HPSRKHTCLAGGSFGTVFAWDLRSQQQPIILSGLEGTKTSNPSPCESEVWEVHYDPYIKSGNLGGMSSTQILPAMICSEDGILTSIEQGKEPVELLAEPCAINGFDIDRQ
HPSEVICNLEWESVAILSRS

MELO3C004111 (gene) of Melon (DHL92) v4 genome