CuGenDBv2

Gene ID	MELO3C004479
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	phosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome location	chr05:27658094..27660692
RNA-Seq Expression	MELO3C004479
Synteny	MELO3C004479
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7030356.1 hypothetical protein SDJN02_08703 [Cucurbita argyrosperma subsp. argyrosperma]

3.6e-56

88.51

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+ V F+ERTMW  SVLEAM +ETVF TANSLACLLA  GA+LN AN TPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DDDNG+D+DDD+DE+EDE+EEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

XP_004139284.1 prostatic spermine-binding protein [Cucumis sativus]

4.7e-64

96.55

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELDCVSFVERTMW RSVLEAMAV+TVFTTANSLACLLA AGAMLNIANGTPGLAAIEERFPFSELHKKE PDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDD+D+DEDEDEDEEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

XP_008457268.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]

2.7e-67

100

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

XP_023545361.1 nucleolin-like [Cucurbita pepo subsp. pepo]

3.6e-56

88.51

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+ V F+ERTMW  SVLEAM +ETVF TANSLACLLA  GA+LN AN TPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DDDNG+D+DDD+DE+EDE+EEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

XP_038891026.1 prostatic spermine-binding protein-like [Benincasa hispida]

3.6e-56

88.51

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELD V  VERTMW RSVLEAMAVET   TANS ACLLA AGAMLN+AN TPGLAAIEERFPFSELHKK+ PDQENKDGSETEDDEDDDD+DDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEE DDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDD+D+DED+DED+ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C539 phosphopantothenoylcysteine decarboxylase subunit VHS3-like

1.3e-67

100

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

A0A6J1FIZ1 prostatic spermine-binding protein-like

3.8e-51

82.95

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL  V FV+RTMW RSVLEA+AVETVFTTANSLACLLA AGA+LN AN  PG AAIEE FPF+ELH+K+RPDQENKDGSETEDD++DDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEE--DDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDG AGGD++  D+DDDDDNGDDDDDD++E+EDED+ED+EEETPQPP KKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEE--DDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

A0A6J1G306 mitotic apparatus protein p62-like

2.1e-54

87.36

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+ V F+ERTMW  SVLEAM +ETVF TANSLACLLA  GA+LN AN TPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQ DD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DDDNG+D+DDD++E+EDE+EEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

A0A6J1HQJ4 prostatic spermine-binding protein-like

5.1e-48

80.34

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL  V FV+RTMW RSVLEA+AVETVFTTANSLACLLA AGA+LN AN  PG AAIEE FPF+ELH+K+ PDQENKDGSETEDD++DDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGD----EEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDG AGGD    +EDDDDDDDNG  DD D++E+ED+D+ED+EEETPQPP KKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGD----EEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

A0A6J1KGN6 prostatic spermine-binding protein-like

4.3e-55

86.78

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Query:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+ V F+ERTMW  SVLEAM +ETVF TANSLACLLA  GA+LN AN TPGLAAIEERFPFSELHKK+RP+QENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DDDNG+D+DDD++E+EDE+EEDEEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G11910.1 unknown protein

1.8e-05

44.24

Show/hide

Query:  WERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD
        W  SV E+     +     +LACLL VA ++L       GL A+++R    E +K+    +ENKD S+++DD+DD+D D+ +D +DD +DEDFSGG EGD
Subjt:  WERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD

Query:  DG----DPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        +G    DPEDDP  NG G  G D+EDDDD++ + DD+D+D++++E++D+E+++++  QPP+KKRK
Subjt:  DG----DPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

AT2G11910.2 unknown protein

1.8e-05

44.24

Show/hide

Query:  WERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD
        W  SV E+     +     +LACLL VA ++L       GL A+++R    E +K+    +ENKD S+++DD+DD+D D+ +D +DD +DEDFSGG EGD
Subjt:  WERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD

Query:  DG----DPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK
        +G    DPEDDP  NG G  G D+EDDDD++ + DD+D+D++++E++D+E+++++  QPP+KKRK
Subjt:  DG----DPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGTTGGACTGTGTAAGCTTCGTGGAGAGAACCATGTGGGAGCGCTCTGTTTTGGAAGCTATGGCGGTGGAGACTGTTTTCACCACTGCAAACTCCCTTGCT
TGCCTTCTGGCGGTGGCAGGAGCTATGTTAAATATTGCTAATGGTACACCAGGATTGGCTGCAATTGAGGAGAGGTTTCCTTTCTCTGAACTTCACAAAAAGGAA
AGGCCTGATCAGGAAAACAAAGATGGTAGTGAAACAGAGGATGATGAAGATGATGACGATGACGATGACGCAAATGATCAGGATGACGACGACGACGACGAAGAT
TTCTCTGGAGGTGAAGAAGGTGATGATGGTGATCCAGAGGACGATCCTGAAGCAAATGGTGATGGAAGAGCTGGAGGTGATGAGGAAGATGACGATGACGATGAC
GACAATGGAGATGATGATGACGACGACGACGATGAGGACGAAGATGAGGACGAAGAAGACGAAGAGGAGGAAACACCCCAGCCACCAGCCAAGAAGAGGAAGTGA

mRNA sequence

Show/hide mRNA sequence

AGGGTTTACCCTAACTGGACTAAACCCAACTTTTCTCCCAAATCTCACAAAACCCATTCCCCTTTCTTCTTCTCTCTCTCACTGCCAGGCCCATCTCTCTCCTCG
ACCTTCCTTCCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTTCTTCTCTCTCTCTCTGCATTTCTTTTCTTCCTATTCTCTATTTCTCTTCACTTTTGAGCTCC
TTTTTCCGGCAATGGAGTTGGACTGTGTAAGCTTCGTGGAGAGAACCATGTGGGAGCGCTCTGTTTTGGAAGCTATGGCGGTGGAGACTGTTTTCACCACTGCAA
ACTCCCTTGCTTGCCTTCTGGCGGTGGCAGGAGCTATGTTAAATATTGCTAATGGTACACCAGGATTGGCTGCAATTGAGGAGAGGTTTCCTTTCTCTGAACTTC
ACAAAAAGGAAAGGCCTGATCAGGAAAACAAAGATGGTAGTGAAACAGAGGATGATGAAGATGATGACGATGACGATGACGCAAATGATCAGGATGACGACGACG
ACGACGAAGATTTCTCTGGAGGTGAAGAAGGTGATGATGGTGATCCAGAGGACGATCCTGAAGCAAATGGTGATGGAAGAGCTGGAGGTGATGAGGAAGATGACG
ATGACGATGACGACAATGGAGATGATGATGACGACGACGACGATGAGGACGAAGATGAGGACGAAGAAGACGAAGAGGAGGAAACACCCCAGCCACCAGCCAAGA
AGAGGAAGTGAGAATATCGATTGGCCCTCCAAATTGTTGAGTTTCGAGTAGCGAGGGAAGTTTAGCTAGTGTTAGCCTTTGCTTTAGGGGGTAGGAACATTGTGG
GCCTTGTTGGTAATGAACTTCTCGTCTTATGTTTGTGATGTTGTGGATCCATATTATATATAACAATTTCTTCTGCTAAATTAGTTAGTAGTCTTATGTTGTCAG
AAGCAGAGATTTTCTTGGCTTCAAGCAAAATTCCATTAAGGTAAGAATAGCAAAATTGTGATTTGATGCCATGGGGTTAAACAAGTTGGTTAGTTAAAATCAATG
TTA

Protein sequence

Show/hide protein sequence

MELDCVSFVERTMWERSVLEAMAVETVFTTANSLACLLAVAGAMLNIANGTPGLAAIEERFPFSELHKKERPDQENKDGSETEDDEDDDDDDDANDQDDDDDDED
FSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDDNGDDDDDDDDEDEDEDEEDEEEETPQPPAKKRK

MELO3C004479 (gene) of Melon (DHL92) v4 genome