; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C004509 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C004509
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPectin lyase-like superfamily protein
Genome locationchr05:27875459..27878207
RNA-Seq ExpressionMELO3C004509
SyntenyMELO3C004509
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061603.1 putative polygalacturonase [Cucumis melo var. makuwa]1.4e-13780.56Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNV+SYGAVGGSNTDSSQAIS+AWKAACNSKTKSSTVLIPKRQTVM                          
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------

Query:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL
                            INGVI+APTSPKEWAGTDKSLWLAF+GISRLSITGS IGKIDGRGTGWWNQSCRDHPSL         ATKIISCNDTNL
Subjt:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL

Query:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVED
        SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTS VNISHIKCGPGHGISIGSLGKSGNFVQVED
Subjt:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVED

Query:  ISVSNIYFKGTTNRARIKTWQVNG
        ISVSNIYFKGTTNRARIKTWQ +G
Subjt:  ISVSNIYFKGTTNRARIKTWQVNG

TYJ97813.1 putative polygalacturonase [Cucumis melo var. makuwa]3.5e-12578.48Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMS------------------------YGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMS                         G   G     S +  + W+     K+ S   ++ + +   IN
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMS------------------------YGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN

Query:  GVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTE
        GVI+APTSPKEWAGTDKSLWLAF+GISRLSITGS IGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTE
Subjt:  GVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTE

Query:  IKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV
        IKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTS VNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ 
Subjt:  IKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV

Query:  NG
        +G
Subjt:  NG

XP_016902034.1 PREDICTED: probable polygalacturonase At1g80170 isoform X1 [Cucumis melo]1.6e-15493.98Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV                  MINGVIMAP
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP

Query:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI
        TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI
Subjt:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI

Query:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK
        TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK
Subjt:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK

XP_016902035.1 PREDICTED: probable polygalacturonase At1g80170 isoform X2 [Cucumis melo]3.9e-10882.1Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM                          
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------

Query:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL
                            INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL
Subjt:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL

Query:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGT
        SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGT
Subjt:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGT

XP_022143115.1 probable polygalacturonase At1g80170 [Momordica charantia]1.7e-11672.11Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP
        MGAF  P   FGLV A+ F  GF +E +FNVMSYGAV G+  DSS AI +AWKAAC+SKT+SSTVLIPKR T+                  MI+G I+AP
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP

Query:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI
        TSP EW  TD+S WLAFEG+SRL++TG+ IGKIDGRGT WW+QSCRDHP L+G T +APTA KIISCN+T+LSN+HFINSSQ HVL+M  +R EIKNLVI
Subjt:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI

Query:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV
        TAPESSPNTDGIHIHSSHN+IIKNTTIGTGDDCVS GDYTS VNISHI+CGPGHGISIGSLG+SGNFVQVEDI VSN+YFKGTTN ARIKTWQ+
Subjt:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV

TrEMBL top hitse value%identityAlignment
A0A1S4E1D2 probable polygalacturonase At1g80170 isoform X17.7e-15593.98Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV                  MINGVIMAP
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP

Query:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI
        TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI
Subjt:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI

Query:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK
        TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK
Subjt:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK

A0A1S4E233 probable polygalacturonase At1g80170 isoform X21.9e-10882.1Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM                          
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------

Query:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL
                            INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL
Subjt:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL

Query:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGT
        SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGT
Subjt:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGT

A0A5A7V0D8 Putative polygalacturonase6.6e-13880.56Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNV+SYGAVGGSNTDSSQAIS+AWKAACNSKTKSSTVLIPKRQTVM                          
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVM--------------------------

Query:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL
                            INGVI+APTSPKEWAGTDKSLWLAF+GISRLSITGS IGKIDGRGTGWWNQSCRDHPSL         ATKIISCNDTNL
Subjt:  --------------------INGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNL

Query:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVED
        SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTS VNISHIKCGPGHGISIGSLGKSGNFVQVED
Subjt:  SNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVED

Query:  ISVSNIYFKGTTNRARIKTWQVNG
        ISVSNIYFKGTTNRARIKTWQ +G
Subjt:  ISVSNIYFKGTTNRARIKTWQVNG

A0A5D3BEX0 Putative polygalacturonase1.7e-12578.48Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMS------------------------YGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN
        MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMS                         G   G     S +  + W+     K+ S   ++ + +   IN
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMS------------------------YGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN

Query:  GVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTE
        GVI+APTSPKEWAGTDKSLWLAF+GISRLSITGS IGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTE
Subjt:  GVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTE

Query:  IKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV
        IKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTS VNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ 
Subjt:  IKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV

Query:  NG
        +G
Subjt:  NG

A0A6J1CMV4 probable polygalacturonase At1g801708.4e-11772.11Show/hide
Query:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP
        MGAF  P   FGLV A+ F  GF +E +FNVMSYGAV G+  DSS AI +AWKAAC+SKT+SSTVLIPKR T+                  MI+G I+AP
Subjt:  MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTV------------------MINGVIMAP

Query:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI
        TSP EW  TD+S WLAFEG+SRL++TG+ IGKIDGRGT WW+QSCRDHP L+G T +APTA KIISCN+T+LSN+HFINSSQ HVL+M  +R EIKNLVI
Subjt:  TSPKEWAGTDKSLWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVI

Query:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV
        TAPESSPNTDGIHIHSSHN+IIKNTTIGTGDDCVS GDYTS VNISHI+CGPGHGISIGSLG+SGNFVQVEDI VSN+YFKGTTN ARIKTWQ+
Subjt:  TAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQV

SwissProt top hitse value%identityAlignment
O23147 Polygalacturonase ADPG17.4e-4638.81Show/hide
Query:  EEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN-----------------GVIMAPTSPKEWAGTDKSLWLAFEGISRLSI
        E +  +V ++GA G   TD +QA  +AWK AC S    +T L+PK +T ++                  G + A T   ++   DK+ WL  E ++ LSI
Subjt:  EEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN-----------------GVIMAPTSPKEWAGTDKSLWLAFEGISRLSI

Query:  TGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNT
         G S G I+G G  WW  SC+   S       APTA  + +  + N+ NL   N+ Q  + + +C + E+ N+ ITAP  SPNTDGIHI ++ NI + N+
Subjt:  TGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNT

Query:  TIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
         IGTGDDC+S  D T  + I  + CGPGHGISIGSLG   +   V  I+V    F  + N  RIKT+Q
Subjt:  TIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ

P35336 Polygalacturonase1.2e-4338.95Show/hide
Query:  NVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQ----------------TVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIG
        NV  +GA  G   D ++A  +AWKAAC+S T S+ +L+PK+                 T+ I G I A     ++   D   WL F+ +  L + G   G
Subjt:  NVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQ----------------TVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITGSSIG

Query:  KIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGD
         I+G G  WW  SC+ + +L  +   APTA          + NL   N+ Q HV    C   +  NL++TAPE+SPNTDGIH+  + NI I +  IGTGD
Subjt:  KIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGD

Query:  DCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNS
        DC+S  + + +V ++ I CGPGHGISIGSLG   +   V D+ V+     GTTN  RIKTWQ    S
Subjt:  DCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNS

Q94AJ5 Probable polygalacturonase At1g801702.1e-5643.07Show/hide
Query:  EAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPK-----------------RQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSIT
        E + +V ++GA G   TD ++A ++AWK AC+SK K + +L+P+                 R T+ I+G I+AP  P  W G ++  WL F G+SRL++ 
Subjt:  EAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPK-----------------RQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSIT

Query:  GSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTT
        G   G ++G G  WW +SC+ + S   R   APTA     C +  + NL+ I+S Q H+ L  CRR  I  L + AP +SPNTDGIHI  S  I+I NTT
Subjt:  GSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTT

Query:  IGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
        + TGDDC+S    +++++IS+I CGPGHGISIGSLGKS ++ +V DI+V       T N  RIKTWQ
Subjt:  IGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ

Q9LW07 Probable polygalacturonase At3g157204.2e-4941.28Show/hide
Query:  LVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN------------------GVIMAPTSPKEWAGTDKS
        L +++ F++ F      +V  +GAVG   TD SQA  +AW+A C S T     ++P   T M+                   G ++AP S   W G DK 
Subjt:  LVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN------------------GVIMAPTSPKEWAGTDKS

Query:  LWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI
         W+ F  I  L I G   G+I+G+G+ WW     +H          PTA K  SCN+  LS L  ++S  AH+ + EC    I +L I APESSPNTDGI
Subjt:  LWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI

Query:  HIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
         + +S N++I++  I TGDDC++    TS ++IS I CGPGHGISIGSLGK G    VE++ V N  F+GT N ARIKTWQ
Subjt:  HIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ

Q9SFB7 Polygalacturonase QRT22.8e-4537.74Show/hide
Query:  FNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMINGV------------------IMAPTSPKEWAGTDKSLWLAFEGISRLSITGS
        FNV ++GA    N D S+A  +AW+AAC+S T    ++ PK +  M+  V                  I A  +P ++   ++  W+ FE ++ L + G 
Subjt:  FNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMINGV------------------IMAPTSPKEWAGTDKSLWLAFEGISRLSITGS

Query:  SIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIG
          G+IDG G  WW +SC+ +P L    L APTA   + CN+  +SN+   N+ Q H+   +C+  +  NL++T+P  SPNTDGIH+  + NI+I+++ + 
Subjt:  SIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIG

Query:  TGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
        TGDDC+S    +  V  + I CGPGHGISIGSLG+  +   V ++ V+     GTTN  RIKTWQ
Subjt:  TGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ

Arabidopsis top hitse value%identityAlignment
AT1G56710.1 Pectin lyase-like superfamily protein1.5e-4937.82Show/hide
Query:  IFNVMSYGAVGGSNTDSSQAISEAWKAACNSK-TKSSTVLIP-----------------KRQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITG
        +F+V S+GA+G  +TD + A   AW AAC S   KS+ +L+P                     + I+G I++P  P+ W    +  W+ F  ++ LSI G
Subjt:  IFNVMSYGAVGGSNTDSSQAISEAWKAACNSK-TKSSTVLIP-----------------KRQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSITG

Query:  SSIGKIDGRGTGWWNQSCRDHPSLEGRTLI----APTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIK
        S  G I+GRG  WWN  C+ H  L G T      +P A ++   +   +  ++F+NS+Q HV    C    + +++I AP SSPNTDGIHI ++HN+ I+
Subjt:  SSIGKIDGRGTGWWNQSCRDHPSLEGRTLI----APTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIK

Query:  NTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNS
        N+ I  GDDC+S G     V+I ++ CGP HGISIGSLG   +   V +I+V+N     + N  RIKTWQ    S
Subjt:  NTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNS

AT1G80140.1 Pectin lyase-like superfamily protein2.8e-4845.71Show/hide
Query:  IPKRQTVMINGVIMAPTSPKEWAGTDKSL--WLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQ
        IPK    +I+G ++A + P++W   +  +  WL F+ +  L+I G   G +DG+G  WW+  CRDHP         P  T   +C +  L +L F NS+Q
Subjt:  IPKRQTVMINGVIMAPTSPKEWAGTDKSL--WLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQ

Query:  AHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKG
         HVL+M  +   I ++ IT+PE+SPNTDGIHI SS  + I ++ I TGDDCVS GD  + +N++ + CGPGHG+SIGSLG+ G  V VE+I VS++ F G
Subjt:  AHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKG

Query:  TTNRARIKTW
        TTN ARIKTW
Subjt:  TTNRARIKTW

AT1G80170.1 Pectin lyase-like superfamily protein1.5e-5743.07Show/hide
Query:  EAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPK-----------------RQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSIT
        E + +V ++GA G   TD ++A ++AWK AC+SK K + +L+P+                 R T+ I+G I+AP  P  W G ++  WL F G+SRL++ 
Subjt:  EAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPK-----------------RQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRLSIT

Query:  GSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTT
        G   G ++G G  WW +SC+ + S   R   APTA     C +  + NL+ I+S Q H+ L  CRR  I  L + AP +SPNTDGIHI  S  I+I NTT
Subjt:  GSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTT

Query:  IGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
        + TGDDC+S    +++++IS+I CGPGHGISIGSLGKS ++ +V DI+V       T N  RIKTWQ
Subjt:  IGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ

AT3G15720.1 Pectin lyase-like superfamily protein3.0e-5041.28Show/hide
Query:  LVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN------------------GVIMAPTSPKEWAGTDKS
        L +++ F++ F      +V  +GAVG   TD SQA  +AW+A C S T     ++P   T M+                   G ++AP S   W G DK 
Subjt:  LVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN------------------GVIMAPTSPKEWAGTDKS

Query:  LWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI
         W+ F  I  L I G   G+I+G+G+ WW     +H          PTA K  SCN+  LS L  ++S  AH+ + EC    I +L I APESSPNTDGI
Subjt:  LWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI

Query:  HIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
         + +S N++I++  I TGDDC++    TS ++IS I CGPGHGISIGSLGK G    VE++ V N  F+GT N ARIKTWQ
Subjt:  HIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ

AT3G15720.2 Pectin lyase-like superfamily protein8.1e-4839.86Show/hide
Query:  LVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN------------------GVIMAPTSPKEWAGTDKS
        L +++ F++ F      +V  +GAVG   TD SQA  +AW+A C S T     ++P   T M+                   G ++AP S   W G DK 
Subjt:  LVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMIN------------------GVIMAPTSPKEWAGTDKS

Query:  LWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI
         W+ F  I  L I G   G+I+G+G+ WW       P+               SCN+  LS L  ++S  AH+ + EC    I +L I APESSPNTDGI
Subjt:  LWLAFEGISRLSITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGI

Query:  HIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ
         + +S N++I++  I TGDDC++    TS ++IS I CGPGHGISIGSLGK G    VE++ V N  F+GT N ARIKTWQ
Subjt:  HIHSSHNIIIKNTTIGTGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCCTTCCCTACTCCCCTGGCGGCTTTTGGGTTAGTTTACGCAATCATGTTCGTGAAAGGGTTTCCAGAAGAGGCCATCTTTAATGTCATGAGTTATGGA
GCTGTGGGAGGAAGCAACACAGATAGTTCTCAAGCAATTTCAGAAGCATGGAAGGCAGCCTGTAATTCTAAAACTAAAAGTTCTACAGTGCTAATTCCCAAGAGG
CAAACAGTTATGATAAATGGAGTGATTATGGCACCAACCTCACCGAAGGAATGGGCGGGGACTGACAAGAGTCTATGGCTAGCTTTCGAAGGGATAAGCAGGCTC
AGTATCACTGGCTCCAGCATCGGCAAGATCGATGGACGAGGCACAGGCTGGTGGAACCAATCATGTAGGGATCACCCGAGCTTGGAGGGCCGCACCTTAATAGCA
CCTACTGCGACGAAGATCATTTCATGCAACGACACCAACCTGAGCAACCTTCACTTTATTAACAGTTCACAAGCACATGTACTATTAATGGAGTGCAGAAGAACC
GAAATCAAGAACTTGGTAATCACAGCTCCTGAAAGCAGTCCAAACACTGACGGGATTCACATTCATTCTTCTCACAATATTATAATAAAGAACACGACTATAGGA
ACAGGTGATGATTGTGTATCTACAGGAGATTACACCTCCCGTGTGAATATCTCACATATTAAATGTGGACCTGGTCATGGAATAAGCATTGGAAGCTTGGGTAAA
AGTGGCAATTTTGTACAAGTGGAGGACATTAGCGTGAGTAATATCTACTTCAAAGGGACTACCAATAGAGCTCGAATTAAGACTTGGCAGGTTAATGGAAATTCT
AAATAG
mRNA sequenceShow/hide mRNA sequence
GAACTGCTTAATTTCATGTTTTCATATCTCCGTAACTGCAATTCCAAACAAAAAGTAGAGAAACCGATCAGATTTAAAACTTCATCACCATTTTAGAAAACCCAT
CATCTTGCTGGAGCCTCCTCTAACTGTCTTATCCACCAAACACCATGGGTGCCTTCCCTACTCCCCTGGCGGCTTTTGGGTTAGTTTACGCAATCATGTTCGTGA
AAGGGTTTCCAGAAGAGGCCATCTTTAATGTCATGAGTTATGGAGCTGTGGGAGGAAGCAACACAGATAGTTCTCAAGCAATTTCAGAAGCATGGAAGGCAGCCT
GTAATTCTAAAACTAAAAGTTCTACAGTGCTAATTCCCAAGAGGCAAACAGTTATGATAAATGGAGTGATTATGGCACCAACCTCACCGAAGGAATGGGCGGGGA
CTGACAAGAGTCTATGGCTAGCTTTCGAAGGGATAAGCAGGCTCAGTATCACTGGCTCCAGCATCGGCAAGATCGATGGACGAGGCACAGGCTGGTGGAACCAAT
CATGTAGGGATCACCCGAGCTTGGAGGGCCGCACCTTAATAGCACCTACTGCGACGAAGATCATTTCATGCAACGACACCAACCTGAGCAACCTTCACTTTATTA
ACAGTTCACAAGCACATGTACTATTAATGGAGTGCAGAAGAACCGAAATCAAGAACTTGGTAATCACAGCTCCTGAAAGCAGTCCAAACACTGACGGGATTCACA
TTCATTCTTCTCACAATATTATAATAAAGAACACGACTATAGGAACAGGTGATGATTGTGTATCTACAGGAGATTACACCTCCCGTGTGAATATCTCACATATTA
AATGTGGACCTGGTCATGGAATAAGCATTGGAAGCTTGGGTAAAAGTGGCAATTTTGTACAAGTGGAGGACATTAGCGTGAGTAATATCTACTTCAAAGGGACTA
CCAATAGAGCTCGAATTAAGACTTGGCAGGTTAATGGAAATTCTAAATAGTTTACATCTCAATAAAAATAAACTATAAAGCTTCCACTAACACTTCCAAAAGATT
GGTAGGTGTACCATTCAAAGGGTCACATTTGAATCTCTATTTTGGATCAGTCCATATCCCCTTAATTATAGACCAAAACTATGGTAAGGTAGAGGGATTTTGCAA
GGAAAAGGTAAGAGAAACTGAACTTCTTTGCCATACTCATTTTAAATTTTGAGCCTTTAATTATTCAGCATATAGTGCTCAGAAAATTTTTATATTTTAACAGCA
ATCAGGCGTTCGCATAGCCAATGTATCCATATAAAACCTTTTTGGACCATCAATGAGCAATGTGGCCATCAATCTCAATTGCAGTAGGTCTGTTGCTTGCACTGG
TATACTGTTGAAGTCAATTCAGCTTCAATCAGTAAACAGCGGACAAAAGGTGACCTCAAGTTGCATCAATGTCCATGGATTTGCCTTTGGAGTGGTTCAACCTAA
ACCCTGTCTTCAGATCTAAATCTGAATCCTACAAAGATCTTCCCCTCCCTATTTAGCAAGGGGTAGATGAAACTTGACTGTGATCTCTTTGGTATGATATTGGGA
GCG
Protein sequenceShow/hide protein sequence
MGAFPTPLAAFGLVYAIMFVKGFPEEAIFNVMSYGAVGGSNTDSSQAISEAWKAACNSKTKSSTVLIPKRQTVMINGVIMAPTSPKEWAGTDKSLWLAFEGISRL
SITGSSIGKIDGRGTGWWNQSCRDHPSLEGRTLIAPTATKIISCNDTNLSNLHFINSSQAHVLLMECRRTEIKNLVITAPESSPNTDGIHIHSSHNIIIKNTTIG
TGDDCVSTGDYTSRVNISHIKCGPGHGISIGSLGKSGNFVQVEDISVSNIYFKGTTNRARIKTWQVNGNSK