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MELO3C004564 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C004564
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationchr05:28341781..28344470
RNA-Seq ExpressionMELO3C004564
SyntenyMELO3C004564
Gene Ontology termsGO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061549.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]9.6e-3895.92Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAI
        MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ M  +
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAI
XP_004139345.1 uncharacterized protein LOC101209110 [Cucumis sativus]2.4e-3697.85Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
XP_008458440.1 PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]2.1e-37100Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
XP_008458447.1 PREDICTED: uncharacterized protein LOC103497847 isoform X2 [Cucumis melo]9.3e-41100Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL
        MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL
XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]2.3e-3190.32Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLK VSRLSSRLQSL+PKFNKRSS SEL   KS CQSQPS ASTSRL CTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein1.1e-3697.85Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSL+PKFNKRSSSSELFS KSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
A0A1S3C7U8 uncharacterized protein LOC103497847 isoform X11.0e-37100Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
A0A1S3C7Z3 uncharacterized protein LOC103497847 isoform X24.5e-41100Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL
        MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL
A0A5A7V7B3 Protein NUCLEAR FUSION DEFECTIVE 64.6e-3895.92Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAI
        MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ M  +
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAI
A0A6J1G399 uncharacterized protein LOC1114503809.4e-3187.1Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MASL+AVSRLSSRLQSL+PK NKRS SSEL   KS CQSQPSAASTSR+ CTSRLP+ELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein6.0e-1450.54Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MAS   + RLSS++ SL+ K +K  ++  + S  S  +S   +++TSR++ + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
AT1G55205.2 unknown protein6.0e-1450.54Show/hide
Query:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MAS   + RLSS++ SL+ K +K  ++  + S  S  +S   +++TSR++ + RLPVELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
AT3G13674.1 unknown protein1.9e-1252.13Show/hide
Query:  MASLKAVSRLSSRLQSLSPKF-NKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ
        MAS + + R SSRL+SL     NK ++ S L S   +  + PS+A++ RL+ +SRLPVELS   S++PLHSAIA++RL+SSL++ES+ WGLVPQ
Subjt:  MASLKAVSRLSSRLQSLSPKF-NKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTCAACAAAAGGTCTTCATCTTCTGAGCTATTTTCATCCAAATCTACTTG
TCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTG
CAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGTTATGCATGCAATTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ACACGGCCTCATAGCTTCACTCAGAACGAAGAAATCTCCAATGGCGTCCTTAAAAGCAGTCTCTCGGTTATCATCCCGCTTGCAATCCCTCTCTCCAAAGTTCAACAAAA
GGTCTTCATCTTCTGAGCTATTTTCATCCAAATCTACTTGTCAATCTCAGCCTTCCGCAGCTTCTACATCGCGTCTTCATTGTACTTCGCGGTTACCAGTGGAGTTGAGT
AGTCAGGGGTCATTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTAATTTCAAGTCTGACCATTGAATCCCAAGGATGGGGTTTGGTTCCTCAGGTTATGCATGC
AATTCTGTAGTTCATCATTTCAAGTAGCTTCATGCAAGACAAAAGCCCTCTTTGATGCTGTTTTATCTTTCCTGCAGGTATTTCAATGCCTTTATGACAGGCTTTGCTAT
GCAGGAACTTGTTCTTTGTAGTTTTCTTTTTATTGACAATTGGGGTCTCTTCTTACTTCTAGTTCTTTACAATCTACAAGAATGTAAACCTAAATTATTGCCTCTGGTTT
TCTTTTTGCTCCTAAATTGGATGAGGTTTAAAGTTAAATTTTCATCTTGTAATGAATCCAAGTGTCATGATTGTTGGATTTATTACCCTTGAAAAAGATGATGTAACTAT
GCTTTGAAGAACATCTTGTTGCAAATAGAATGGTTATGGATTCTTCCTCTAGGTTTCTTTTGAT
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQVMHAIL