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MELO3C004701 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C004701
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMYND-type domain-containing protein
Genome locationchr12:11879377..11879684
RNA-Seq ExpressionMELO3C004701
SyntenyMELO3C004701
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002893 - Zinc finger, MYND-type
IPR044508 - F-box protein At5g50450/At1g67340-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034193.1 F-box protein [Cucumis melo var. makuwa]1.2e-5496.08Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWL+DNGD  D
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

KAA0035472.1 F-box protein [Cucumis melo var. makuwa]8.6e-58100Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

XP_004135325.1 F-box protein At1g67340 [Cucumis sativus]6.8e-5596.08Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPVERWL+DNGDG D
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

XP_008446037.1 PREDICTED: F-box protein At1g67340 [Cucumis melo]1.2e-5496.08Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWL+DNGD  D
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

XP_038893304.1 F-box protein At1g67340 [Benincasa hispida]2.2e-5394.06Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPE HPASQFLAEWFEARG SPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWL++NGDGG 
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A0A0KTC5 MYND-type domain-containing protein3.3e-5596.08Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHK+DCAPVERWL+DNGDG D
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

A0A1S3BE37 F-box protein At1g673405.6e-5596.08Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWL+DNGD  D
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

A0A5A7SUQ1 F-box protein5.6e-5596.08Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARG SPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWL+DNGD  D
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

A0A5D3E4M0 F-box protein4.2e-58100Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  DV
        DV
Subjt:  DV

A0A6J1KDE5 F-box protein At1g673401.8e-5394.06Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD
        CPLLSDFGCNIPAPEAHPASQFLAEWF ARG SPG+GLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC PVERWL+DNGDGG 
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGD

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
Q09415 SET domain-containing protein 142.6e-0440.91Show/hide
Query:  CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE
        C +  T   E ++CS C  + YCS+ CQ  DWKL HK++C  ++
Subjt:  CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE

Q2YDC9 Programmed cell death protein 22.3e-0540.74Show/hide
Query:  NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE
        +G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  +
Subjt:  NGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVE

Q9FK27 F-box protein At5g504507.1e-3159.34Show/hide
Query:  IPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD
        +P  E HP ++FL EWF +  V    GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +HK++C P++ W+    + GDD
Subjt:  IPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD

Q9FPS9 Ubiquitin carboxyl-terminal hydrolase 151.1e-0453.12Show/hide
Query:  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE
        RCS C +V YCS  CQ + W++ HK +C PVE
Subjt:  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE

Q9FYF9 F-box protein At1g673404.9e-4881.19Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVS-PGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGG
        CPLLSDFGCN+PAPE HPA++FLA+WF  RG   PG+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQALDWKLRHKMDCAPV+RWL + GDGG
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVS-PGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGG

Query:  D
        +
Subjt:  D

Arabidopsis top hitse value%identityAlignment
AT1G17110.1 ubiquitin-specific protease 158.1e-0653.12Show/hide
Query:  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE
        RCS C +V YCS  CQ + W++ HK +C PVE
Subjt:  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE

AT1G17110.2 ubiquitin-specific protease 158.1e-0653.12Show/hide
Query:  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE
        RCS C +V YCS  CQ + W++ HK +C PVE
Subjt:  RCSVCGAVNYCSRACQALDWKLRHKMDCAPVE

AT1G67340.1 HCP-like superfamily protein with MYND-type zinc finger3.5e-4981.19Show/hide
Query:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVS-PGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGG
        CPLLSDFGCN+PAPE HPA++FLA+WF  RG   PG+GLRLCSH GCGRPETR+HEFRRCSVCG VNYCSRACQALDWKLRHKMDCAPV+RWL + GDGG
Subjt:  CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVS-PGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGG

Query:  D
        +
Subjt:  D

AT2G24640.1 ubiquitin-specific protease 192.4e-0547.5Show/hide
Query:  CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC
        CG+  T     ++CS C +V YCS ACQ  DWK  HK+ C
Subjt:  CGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDC

AT5G50450.1 HCP-like superfamily protein with MYND-type zinc finger5.1e-3259.34Show/hide
Query:  IPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD
        +P  E HP ++FL EWF +  V    GLR+CSH GCGRPETR HEFRRCSVCG VNYCSR CQALDW+ +HK++C P++ W+    + GDD
Subjt:  IPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTCCGTTGTTGAGCGATTTTGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGTGTCGCCCGGG
AATGGGCTTAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACGT
GCGTGTCAGGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCAATGACAATGGTGACGGTGGGGACGATGTA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGTTGTTGAGCGATTTTGGTTGCAATATCCCGGCACCGGAGGCTCATCCAGCAAGTCAGTTTTTAGCGGAATGGTTCGAGGCACGTGGGGTGTCGCCCGG
GAATGGGCTTAGGCTATGTTCGCACGTGGGGTGTGGACGTCCGGAGACGAGACGACATGAGTTCCGTCGGTGTTCCGTTTGTGGTGCTGTTAATTACTGCTCACG
TGCGTGTCAGGCTCTTGATTGGAAACTCCGCCATAAGATGGATTGTGCGCCGGTGGAACGATGGCTCAATGACAATGGTGACGGTGGGGACGATGTAG
Protein sequenceShow/hide protein sequence
CPLLSDFGCNIPAPEAHPASQFLAEWFEARGVSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAVNYCSRACQALDWKLRHKMDCAPVERWLNDNGDGGDDV