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MELO3C004964 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C004964
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionsacsin isoform X1
Genome locationchr12:5465114..5465335
RNA-Seq ExpressionMELO3C004964
SyntenyMELO3C004964
Gene Ontology termsGO:0030544 - Hsp70 protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058573.1 sacsin isoform X1 [Cucumis melo var. makuwa]1.5e-2490.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
XP_011659424.1 sacsin isoform X2 [Cucumis sativus]1.5e-2490.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
XP_038897838.1 sacsin isoform X1 [Benincasa hispida]1.5e-2490.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
XP_038897839.1 sacsin isoform X2 [Benincasa hispida]1.5e-2490.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
XP_038897842.1 sacsin isoform X4 [Benincasa hispida]1.5e-2490.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
TrEMBL top hitse value%identityAlignment
A0A0A0K875 RING-type domain-containing protein7.4e-2590.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
A0A1S3CEI3 sacsin isoform X27.4e-2590.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
A0A1S3CEJ7 sacsin isoform X17.4e-2590.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
A0A5A7URT0 Sacsin isoform X17.4e-2590.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
A0A5D3CET3 Sacsin isoform X17.4e-2590.91Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QEKSDAAAKEADT KAAWLCRVCLTSEVEITIVPCGHVLC KCSSA+ KC F RLKVSKIMRIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73950.1 Transmembrane Fragile-X-F-associated protein4.9e-0538.3Show/hide
Query:  LCRVCLTSEVEITIVPCGH-VLCHKCSSAILKCQFFRLKVSKIMRIF
        LCRVC   E+ + ++PC H VLC  CS    KC F R+ + + + ++
Subjt:  LCRVCLTSEVEITIVPCGH-VLCHKCSSAILKCQFFRLKVSKIMRIF
AT5G23110.1 Zinc finger, C3HC4 type (RING finger) family protein2.7e-1957.58Show/hide
Query:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP
        QE+++A+ KEA+T K+ WLC++C T EVE+TIVPCGHVLC  CS+++ +C F RL+V++ +RIFRP
Subjt:  QEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGGATCGATTTTGCAGGAAAAGTCTGACGCTGCAGCCAAAGAAGCAGATACAACGAAAGCAGCTTGGCTTTGTCGAGTTTGTTTGACTTCCGAGGTA
GAAATAACCATAGTACCTTGTGGCCATGTTTTGTGCCACAAGTGTTCTTCTGCTATTTTAAAGTGCCAATTTTTTCGACTTAAAGTTTCAAAAATCATGAGAATA
TTTCGACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGGATCGATTTTGCAGGAAAAGTCTGACGCTGCAGCCAAAGAAGCAGATACAACGAAAGCAGCTTGGCTTTGTCGAGTTTGTTTGACTTCCGAGGTA
GAAATAACCATAGTACCTTGTGGCCATGTTTTGTGCCACAAGTGTTCTTCTGCTATTTTAAAGTGCCAATTTTTTCGACTTAAAGTTTCAAAAATCATGAGAATA
TTTCGACCTTGA
Protein sequenceShow/hide protein sequence
MVSGSILQEKSDAAAKEADTTKAAWLCRVCLTSEVEITIVPCGHVLCHKCSSAILKCQFFRLKVSKIMRIFRP