CuGenDBv2

Gene ID	MELO3C005017
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	ATP synthase subunit alpha
Genome location	chr12:4403404..4403903
RNA-Seq Expression	MELO3C005017
Synteny	MELO3C005017
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0031090 - organelle membrane (cellular component) GO:0031967 - organelle envelope (cellular component) GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0005524 - ATP binding (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR004100 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain IPR023366 - ATP synthase subunit alpha, N-terminal domain-like superfamily IPR027417 - P-loop containing nucleoside triphosphate hydrolase IPR036121 - ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AEN56122.1 putative ATP synthase F1 subunit 1 [Cucumis melo subsp. melo]

7.2e-54

73.17

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF
        AVDS     R Q+ LII +R+T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF

KAA0051946.1 ATPase subunit 1 [Cucumis melo var. makuwa]

4.7e-53

100

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIG
        AVDSLVPIG
Subjt:  AVDSLVPIG

KAA0066857.1 putative ATP synthase F1 subunit 1 [Cucumis melo var. makuwa]

1.9e-54

71.52

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF NGVKGIALNLEN++V IVVFGSDT IKEGDLVK TGSI+D+P  K M GR+V  L APIDGR A SDHE+R ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIFF
        AVDSLVPIGR QQ LII +R+  +  + I+TILNQKQ+NSTQFKCF +NL FFLV I+P IIIFF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIFF

KAF4348348.1 hypothetical protein F8388_005380 [Cannabis sativa]

3.7e-50

76.43

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL  PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ LII +R+T + D+AI+TILNQKQ+NS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

TYJ99657.1 putative ATP synthase F1 subunit 1 [Cucumis melo var. makuwa]

7.2e-54

73.17

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF
        AVDS     R Q+ LII +R+T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF

TrEMBL top hits

e value

%identity

Alignment

A0A3S9JIG8 ATPase subunit 1

3.5e-54

73.17

Show/hide

Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF
        AVDS     R Q+ LII +R+T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF

A0A5A7UCL8 ATPase subunit 1 (Mitochondrion)

2.3e-53

100

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIG
        AVDSLVPIG
Subjt:  AVDSLVPIG

A0A5A7VI90 Putative ATP synthase F1 subunit 1 (Mitochondrion)

9.2e-55

71.52

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF NGVKGIALNLEN++V IVVFGSDT IKEGDLVK TGSI+D+P  K M GR+V  L APIDGR A SDHE+R ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIFF
        AVDSLVPIGR QQ LII +R+  +  + I+TILNQKQ+NSTQFKCF +NL FFLV I+P IIIFF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIFF

A0A5D3BKJ9 Putative ATP synthase F1 subunit 1 (Mitochondrion)

3.5e-54

73.17

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF
        AVDS     R Q+ LII +R+T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF

G3EU37 Putative ATP synthase F1 subunit 1

3.5e-54

73.17

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL APIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF
        AVDS     R Q+ LII +R+T +  +AI+TILNQKQI+STQFKCF +NL FFLVRI+P I IF
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIF

SwissProt top hits

e value

%identity

Alignment

P05494 ATP synthase subunit alpha, mitochondrial

9.1e-52

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL  PIDG+GA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ LII +R+T +  +AI+TILNQKQ+NS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

P18260 ATP synthase subunit alpha, mitochondrial

4.1e-52

75.71

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL  PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ LII +R+T +  +AI+TILNQKQ+NS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

P24459 ATP synthase subunit alpha, mitochondrial

4.1e-52

75.71

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL  PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ LII +R+T +  +AI+TILNQKQ+NS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

Q01915 ATP synthase subunit alpha, mitochondrial

4.1e-52

75.71

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL  PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ LII +R+T +  +AI+TILNQKQ+NS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

Q06735 ATP synthase subunit alpha, mitochondrial

3.1e-52

75.71

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MVEF +GVKGIALNLENE+V IVVFGSDTAIKEGDLVKRTGSI+D+PA K MLGR+V AL  PIDGRGA SDHERR ++VKA GIIERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ LII +R+T +  +AI+TILNQKQ+NS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

Arabidopsis top hits

e value

%identity

Alignment

AT2G07698.1 ATPase, F1 complex, alpha subunit protein

4.7e-51

71.43

Show/hide

Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MV F NGVKG+ALNLENE+V IVVFG DTAIKEGDLVKRTGSI+D+PA K MLGR+V A+  PIDG+GA SDHE+R ++VKA GI+ERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ L+I +R+T +  +AI+TILNQKQINS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

ATCG00120.1 ATP synthase subunit alpha

3.5e-30

48.92

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        +VEF  G  GIALNLE+ +V +V+ G    I+EG  VK TG I  IP  +  LGR++ AL  PIDGRG  S  E R I+  A GII R+S ++P++ GL 
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQIN
        A+DS++PIGR Q+ LII +R+T +  +A +TILNQ+  N
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQIN

ATMG01190.1 ATP synthase subunit 1

1.4e-50

71.43

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Query:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK
        MV F NGVKG+ALNLENE+V IVVFG DTAIKEGDLVKRTGSI+D+PA K MLGR+V A+  PIDG+GA SDHE+R ++VKA GI+ERKS H+PM+ GLK
Subjt:  MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLK

Query:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS
        AVDSLVPIGR Q+ L+I  R+T +  +AI+TILNQKQINS
Subjt:  AVDSLVPIGRSQQVLIIKERKTRRIDLAINTILNQKQINS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTAGAATTTGTCAACGGTGTCAAAGGAATAGCCTTAAATCTTGAGAATGAGAGTGTATGGATTGTTGTCTTTGGTAGTGATACCGCTATTAAAGAAGGAGATCTTGT
CAAGCGCACTGGATCGATTATGGATATTCCAGCAAGAAAGGTTATGCTTGGGCGTATGGTCGGTGCCTTGGAAGCACCTATTGATGGAAGAGGGGCTTTCAGCGATCATG
AGCGAAGATGTATCAAAGTGAAAGCCCTTGGAATTATTGAACGTAAATCAGGGCATGATCCTATGAAAATAGGGTTAAAAGCGGTGGATAGCCTGGTTCCTATAGGTAGG
AGCCAACAAGTACTGATAATCAAGGAGCGAAAAACTAGAAGAATTGATTTAGCTATTAATACCATATTAAACCAAAAGCAAATAAACTCCACTCAATTCAAATGCTTTGT
TGTGAACCTCTATTTTTTTCTTGTTCGGATTATGCCTGCTATTATAATTTTTTTTCTA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVEFVNGVKGIALNLENESVWIVVFGSDTAIKEGDLVKRTGSIMDIPARKVMLGRMVGALEAPIDGRGAFSDHERRCIKVKALGIIERKSGHDPMKIGLKAVDSLVPIGR
SQQVLIIKERKTRRIDLAINTILNQKQINSTQFKCFVVNLYFFLVRIMPAIIIFFL

MELO3C005017 (gene) of Melon (DHL92) v4 genome