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MELO3C005177 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C005177
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationchr09:16985813..16986286
RNA-Seq ExpressionMELO3C005177
SyntenyMELO3C005177
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.7e-71100Show/hide
Query:  MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALL
        MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALL
Subjt:  MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALL

Query:  FEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG
        FEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG
Subjt:  FEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG

KAG6579136.1 hypothetical protein SDJN03_23584, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3153.5Show/hide
Query:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF
        M  + Q +SIDMN+  S   A +  + E                   +  NN+GK + GLTFQAVLALFI++P S PPLL +LFAAA+LIS A+S A +F
Subjt:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF

Query:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLI-HQNFAWISWLASGFSLMAFVLSFR
        LQ  FPRIAL F KIGA++AA+G CI+ASLL+ HQNF+WI WLA GF+LMAF+LSF+
Subjt:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLI-HQNFAWISWLASGFSLMAFVLSFR

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]3.5e-3454.78Show/hide
Query:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF
        M  + Q +SIDMN+ +  I   ++  P   ++P     + P P +SS+T NN+GK + GLTFQAVLALFI+ P S PPLL H+FAAA+LISFA+S A +F
Subjt:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF

Query:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLI-HQNFAWISWLASGFSLMAFVLSFR
        LQ  +PRIAL   KIGAL+AAIG C + S+L+ HQ+F+WI WLA GF+LMAF+LSF+
Subjt:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLI-HQNFAWISWLASGFSLMAFVLSFR

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]1.2e-6688.54Show/hide
Query:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF
        ME SSQQISIDMN LYS IT+INERNPEIN LPICI MQ  SPANSSKTENNVG TILGLTFQAVLALFITS  SSPPLLTHLF AAVLISFAVSF G+F
Subjt:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF

Query:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG
        LQ+GFPRIALLFEKIGALIAAIGVCI+ASLLIHQNFAWISWLA GFSLMAF+LSFRG
Subjt:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]5.4e-3555.76Show/hide
Query:  MEPSSQQISIDMNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITS-PNSSPPLLTHLFAAAVLISF
        M  +S Q S+DM+   SFI  I++RN  +       N LP+ I MQ+ SP  ++ +   +GK IL L+FQAVLALFI+S P S PPLL H FAAAV ISF
Subjt:  MEPSSQQISIDMNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITS-PNSSPPLLTHLFAAAVLISF

Query:  AVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR
        AVSFA +FL N FPR A LFEK+GAL +A GVC +AS LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  AVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein5.8e-6788.54Show/hide
Query:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF
        ME SSQQISIDMN LYS IT+INERNPEIN LPICI MQ  SPANSSKTENNVG TILGLTFQAVLALFITS  SSPPLLTHLF AAVLISFAVSF G+F
Subjt:  MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIF

Query:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG
        LQ+GFPRIALLFEKIGALIAAIGVCI+ASLLIHQNFAWISWLA GFSLMAF+LSFRG
Subjt:  LQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG

A0A0A0KJP2 Uncharacterized protein2.6e-3555.76Show/hide
Query:  MEPSSQQISIDMNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITS-PNSSPPLLTHLFAAAVLISF
        M  +S Q S+DM+   SFI  I++RN  +       N LP+ I MQ+ SP  ++ +   +GK IL L+FQAVLALFI+S P S PPLL H FAAAV ISF
Subjt:  MEPSSQQISIDMNELYSFITAINERNPEI-------NSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITS-PNSSPPLLTHLFAAAVLISF

Query:  AVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR
        AVSFA +FL N FPR A LFEK+GAL +A GVC +AS LL+HQNFAWI W+A  FS++ F LSF+
Subjt:  AVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVAS-LLIHQNFAWISWLASGFSLMAFVLSFR

A0A0A0KQ03 Uncharacterized protein2.5e-3049.4Show/hide
Query:  EPSSQQISIDMNELYSFITAINERNPEINS----------LPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFIT-SPNSSPPLLTHLFAAAVLI
        E    +IS+DMN+L S I A+  RNP I+S          LPI I MQRPSP NS +     G T L LTFQA++ LF++ +P+SS PL + LFAA +L 
Subjt:  EPSSQQISIDMNELYSFITAINERNPEINS----------LPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFIT-SPNSSPPLLTHLFAAAVLI

Query:  SFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR
        SF  S+ G+ LQ  FP+ A L +  GAL AAIG CI+ SLL++ NF WI WLA+G  L AF++SF+
Subjt:  SFAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.3e-71100Show/hide
Query:  MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALL
        MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALL
Subjt:  MNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIALL

Query:  FEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG
        FEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG
Subjt:  FEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter1.9e-3049.7Show/hide
Query:  EPSSQQISIDMNELYSFITAINERNPEINS----------LPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLIS
        E    +IS+DMNELYSFITA+  RNP I+S          LPI I MQRPSP NS +     G T +   FQA+L LF+  P S PP L+ L    +L +
Subjt:  EPSSQQISIDMNELYSFITAINERNPEINS----------LPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLIS

Query:  FAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR
        F  SF G+ LQ  FP+IA L +  GAL+AAIGVCI+ S L+H N  WI WLA G  L AF+ SF+
Subjt:  FAVSFAGIFLQNGFPRIALLFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCAAGTTCACAGCAAATTTCCATAGATATGAATGAACTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGAAATCAACAGCTTACCAATTTGCATCAC
AATGCAGAGGCCATCACCAGCCAACAGCTCTAAGACTGAGAATAATGTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTGGCTTTGTTCATTACCTCGCCCA
ATTCATCTCCTCCACTTTTGACACATCTCTTTGCGGCTGCAGTCTTGATTAGCTTTGCAGTTTCGTTTGCTGGAATTTTCCTTCAAAATGGATTCCCGAGAATCGCGCTT
CTGTTCGAAAAGATTGGTGCTCTTATTGCTGCAATTGGTGTGTGCATCGTAGCAAGTCTTCTAATCCATCAAAACTTTGCTTGGATCTCTTGGCTGGCTTCTGGCTTCTC
CTTGATGGCTTTTGTTCTATCATTTAGAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCAAGTTCACAGCAAATTTCCATAGATATGAATGAACTCTATTCCTTCATCACAGCAATTAATGAAAGAAATCCTGAAATCAACAGCTTACCAATTTGCATCAC
AATGCAGAGGCCATCACCAGCCAACAGCTCTAAGACTGAGAATAATGTTGGGAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTGGCTTTGTTCATTACCTCGCCCA
ATTCATCTCCTCCACTTTTGACACATCTCTTTGCGGCTGCAGTCTTGATTAGCTTTGCAGTTTCGTTTGCTGGAATTTTCCTTCAAAATGGATTCCCGAGAATCGCGCTT
CTGTTCGAAAAGATTGGTGCTCTTATTGCTGCAATTGGTGTGTGCATCGTAGCAAGTCTTCTAATCCATCAAAACTTTGCTTGGATCTCTTGGCTGGCTTCTGGCTTCTC
CTTGATGGCTTTTGTTCTATCATTTAGAGGGTAG
Protein sequenceShow/hide protein sequence
MEPSSQQISIDMNELYSFITAINERNPEINSLPICITMQRPSPANSSKTENNVGKTILGLTFQAVLALFITSPNSSPPLLTHLFAAAVLISFAVSFAGIFLQNGFPRIAL
LFEKIGALIAAIGVCIVASLLIHQNFAWISWLASGFSLMAFVLSFRG