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MELO3C005192 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C005192
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionribonuclease P protein subunit p38
Genome locationchr09:17132984..17136524
RNA-Seq ExpressionMELO3C005192
SyntenyMELO3C005192
Gene Ontology termsGO:0043232 - intracellular non-membrane-bounded organelle (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008466254.1 PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo]1.6e-8590.43Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ  
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--

Query:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                       AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466263.1 PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]6.6e-8790.91Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ---
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ   
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ---

Query:  --------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                      AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  --------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466271.1 PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo]7.6e-8389.36Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLK  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ  
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--

Query:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                       AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466280.1 PREDICTED: ribonuclease P protein subunit p38 isoform X5 [Cucumis melo]9.2e-8999.42Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI

Query:  LLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        LLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  LLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

XP_008466288.1 PREDICTED: ribonuclease P protein subunit p38 isoform X6 [Cucumis melo]3.7e-90100Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAIL
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAIL
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAIL

Query:  LTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        LTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  LTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

TrEMBL top hitse value%identityAlignment
A0A1S3CQU5 uncharacterized protein LOC103503720 isoform X23.2e-8790.91Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ---
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ   
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ---

Query:  --------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                      AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  --------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CQV2 ribonuclease P protein subunit p38 isoform X54.5e-8999.42Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI

Query:  LLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        LLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  LLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CR39 ribonuclease P protein subunit p38 isoform X61.8e-90100Show/hide
Query:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAIL
        MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAIL
Subjt:  MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAIL

Query:  LTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
        LTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  LTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CS60 uncharacterized protein LOC103503720 isoform X17.9e-8690.43Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ  
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--

Query:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                       AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

A0A1S3CS63 uncharacterized protein LOC103503720 isoform X33.7e-8389.36Show/hide
Query:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--
        MGKNPKSSAHPVATLQSKPYED SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLK  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ  
Subjt:  MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ--

Query:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
                       AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Subjt:  ---------------AILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK

SwissProt top hitse value%identityAlignment
P78345 Ribonuclease P protein subunit p382.3e-0532.11Show/hide
Query:  LKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGS
        ++KQ AIGVNEVTRALER                    +L  +L+  +  P  +T+H+  L++SR VP   V     S R+  ++ LK  +A+  K N  
Subjt:  LKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGS

Query:  PVNQLIDEI
             +DE+
Subjt:  PVNQLIDEI

Q32LC1 Ribonuclease P protein subunit p383.9e-0533.04Show/hide
Query:  LKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGS
        ++KQ AIG+NEVTRALER                    +L   L   +  P  +T+H+  L++SR VP   V     S RL  ++ LK  +A+G K N +
Subjt:  LKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGS

Query:  PVNQLIDEILQR
           + +  IL R
Subjt:  PVNQLIDEILQR

Q80UU2 Ribonuclease P protein subunit p385.0e-0530.36Show/hide
Query:  LKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGS
        ++KQ  IGVNEVTRALER                    +L  +L+  +  P  +T+H+  L++SR VP   V   + S R+  ++ LK  +A+G + N  
Subjt:  LKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGS

Query:  PVNQLIDEILQR
             ++ I+ R
Subjt:  PVNQLIDEILQR

Arabidopsis top hitse value%identityAlignment
AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.6e-3856.76Show/hide
Query:  DSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSR
        D YEGERL  LL  IQR I+T++  N  SLPEK WLKKQ AIG+NEVTR LERM P   S +  NP       +LQ ++L A+C PR LT H+P LA SR
Subjt:  DSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSR

Query:  KVPLILVKD-KEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR
         VP++ V+D K  SLRLGELV LKTA+AIGIK+ G+ +N L+ +IL R
Subjt:  KVPLILVKD-KEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCA
GAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGAAACAGTTTGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAAC
GGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGCTATACTGTTAACAGCCAATTGCAACCCTCGATGGCTT
ACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAAT
TGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAA
mRNA sequenceShow/hide mRNA sequence
TACAACAGTGCTTTCGTTTAATCCTTTGTTTGTAGATTCTCTACATATTTTGAATTCTACAGTTGCAATAATACTTCACCAAAATTTCAAACAAAGCCTCGGGTTGGCAG
TGCTACTTCGTCATCGTCCCGGTTTCACTATGGTTACTTCCAATCGGAGAACGCCGCCGTTATTTCTTTCCAGACTTTGAAACTACACTTTCCACCCAAGTTTTCACTAA
TGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAG
AGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGAAACAGTTTGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACG
GATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGCTATACTGTTAACAGCCAATTGCAACCCTCGATGGCTTA
CAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATT
GCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAAAGACACGTTTCATGAGTACAACCAAGTTGTCCGGTGTT
CACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTATCTTCTTCCCTCTAGCAGTCTGAAATGTCTAGCTTGCTAATCACATGAAATGGGTTCGAGTTGATTCA
TTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGCTCGTAGATTTGGGGAATGTTGATCTTTTGAAAAAGGTTGTTTGTGGCTGGAGTTCGGAAAATTCGTAGTAAC
ATGTGTCTTGTACATTCGATTGGAGGTTATGGAGATGAAAGATTACTTGTGTTTGGTATGCCTTACATTGTTTGTGTTAGACATGAATTTATATTCCTATTAATTCCTAT
TAAATCCATCCATTTAAAATCAACCCAGCATTATCTAAATAAACTTATTTTCGA
Protein sequenceShow/hide protein sequence
MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWL
TNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK