CuGenDBv2

Gene ID	MELO3C005381
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	chromosome transmission fidelity protein 8 homolog
Genome location	chr09:19817394..19820549
RNA-Seq Expression	MELO3C005381
Synteny	MELO3C005381
Gene Ontology terms	GO:0007064 - mitotic sister chromatid cohesion (biological process) GO:0031390 - Ctf18 RFC-like complex (cellular component)
InterPro domains	IPR018607 - Chromosome transmission fidelity protein 8

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055164.1 hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa]

2.3e-69

98.57

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_004143632.1 putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus]

6.2e-67

94.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        M+IKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_008467231.1 PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo]

7.1e-71

100

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_023551664.1 putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo]

2.2e-59

84.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIK+KCNCGETKCLEWAVVELQG+VE Q +F+DR+Q LEIG+LCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK + VDEDQS D KS  AELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+P VKERSRASGSAV GQ T
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

XP_038906846.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida]

2.0e-65

93.57

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK RSVDEDQSSD KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPT4 Uncharacterized protein

3.0e-67

94.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        M+IKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYHELTGSK+SLKKPLLVLKKTRSVDEDQSSD KSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A1S3CT18 Uncharacterized protein

3.5e-71

100

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A5A7UJ36 Uncharacterized protein

1.1e-69

98.57

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVE QSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A5D3BQB7 Uncharacterized protein

3.5e-71

100

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

A0A6J1I4S6 Uncharacterized protein

1.4e-59

84.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI
        MQIK+KCNCGETKCLEWAVVELQG+VE Q +F+DR Q LEIG+LCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK + VDEDQS D KS  AELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVI

Query:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT
        GIIRQR LFKTRPKALISKP+P VKERSRASGSAV GQTT
Subjt:  GIIRQRILFKTRPKALISKPEPLVKERSRASGSAVKGQTT

SwissProt top hits

e value

%identity

Alignment

P0C6T1 Chromosome transmission fidelity protein 8 homolog

2.4e-05

31.07

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Query:  EWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  VL K     +D     +    +  V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG13 Chromosome transmission fidelity protein 8 homolog

6.4e-06

32.04

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Query:  EWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  VL K    D+D     +       V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG15 Chromosome transmission fidelity protein 8 homolog

6.4e-06

31.07

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Query:  EWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   +    +G L   + + +    VG+H L G  + L+KP  VL K     +D     +    +  V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

Q54JL4 Putative uncharacterized protein DDB_G0287975

1.1e-08

32.58

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILC-RPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTR-------------SVD-ED
        MQI +K     T   EW +++LQG +E+       ++N  +GIL  +P+ ++ ++F +G   L G +V LKKPLLV+KK++             +VD +D
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILC-RPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTR-------------SVD-ED

Query:  QSSDIKSGNAELEVIGIIRQRILFKTRPKALI
           + K    E  + GI   +I F TRP   I
Subjt:  QSSDIKSGNAELEVIGIIRQRILFKTRPKALI

Q65ZA6 Chromosome transmission fidelity protein 8

6.4e-06

39.78

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Query:  VVEHQSTFQDRIQNLEIG----ILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRP
        +VE Q+T + +  +L IG    I  + S ++  T TVG   + G   SLKKPL VL+KT +   D  S   S + EL+   IIR+RI F +RP
Subjt:  VVEHQSTFQDRIQNLEIG----ILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRP

Arabidopsis top hits

e value

%identity

Alignment

AT5G52220.1 CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

3.6e-36

64.71

Show/hide

Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  IQNLEIG LC   S+Q  YTFTVGYHEL GSKV+LKKPLLVLKK       Q  ++     ELEV
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

AT5G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607).

3.6e-36

64.71

Show/hide

Query:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  IQNLEIG LC   S+Q  YTFTVGYHEL GSKV+LKKPLLVLKK       Q  ++     ELEV
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCR-PSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTAGTTGAACATCAATCCACCTTCCAAGATCGCATTCA
AAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACAGGAAGCAAAGTTTCTTTGAAGAAGCCATTGT
TGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGATTGGGATAATCAGGCAGCGAATTCTGTTTAAG
ACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAGGCCAAACAACATGA

mRNA sequence

Show/hide mRNA sequence

AAAAGTGTCGACGTTATTTCCAAAAGAGCGGGAAGAGCTCCCTTATTTCCCGCCATTTTCCATCTTCTCGTCGGAGCTTCACAATTCTCTATGTTTTTCTCTCTCAGAGC
TGAGGAACCTTAAATCGGAAGCCGTAGAAAGATGCAGATTAAGCTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTACAAGGCGTAGTTG
AACATCAATCCACCTTCCAAGATCGCATTCAAAACCTCGAAATCGGCATTCTATGTCGGCCGTCTGCTCAGGAAATGTATACTTTTACGGTAGGGTACCATGAGCTGACA
GGAAGCAAAGTTTCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCTGTGGATGAGGATCAGAGTAGCGATATTAAATCGGGTAATGCAGAGTTGGAAGTGAT
TGGGATAATCAGGCAGCGAATTCTGTTTAAGACCAGACCAAAGGCACTCATATCCAAACCAGAGCCATTGGTTAAGGAAAGATCCCGTGCTTCAGGATCTGCAGTGAAAG
GCCAAACAACATGAGTTCTGTGTTTAAAGGAAAGAGAACCTTATCAATCTTACTCCCAAGAGTACTGTGATAATACCTTTGATCAAGTTTTATTCAGAAGTCTGAGGTTT
TGTCTTATTGATGTCGAGGTGTAGACTTTGGCTGATGATCGAGCATGAACTTGAGTTTTAATTAGTTAATTGACAAACGATTTTGTTCTCTTCCTTAATATATTATATTC
CTAAAACATTAGGAGAAATAACATATACTATAGATAACGAAAGACTATAATAGATTTTTTATAGCCTGTTTTTTTTAAAGTTCTTACGGTTCATGTTATCAAAACTATGT
GTTTTTTATAGCAATTTTTTGAAGCTATAACGAGTATTATAGTAGAGTATGAAAATATAGCTTATATACGTTACTATAAAAACATTTGATAGCGTTTTTCATTGTAGTTA
TAATAAATTTATATAGCT

Protein sequence

Show/hide protein sequence

MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYHELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFK
TRPKALISKPEPLVKERSRASGSAVKGQTT

MELO3C005381 (gene) of Melon (DHL92) v4 genome