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MELO3C005405 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C005405
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCDGSH iron-sulfur domain-containing protein NEET
Genome locationchr09:20069067..20070307
RNA-Seq ExpressionMELO3C005405
SyntenyMELO3C005405
Gene Ontology termsGO:0010506 - regulation of autophagy (biological process)
GO:0005741 - mitochondrial outer membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR018967 - Iron-binding zinc finger, CDGSH type
IPR042216 - MitoNEET, CDGSH iron-sulfur domain
IPR045131 - CDGSH iron-sulfur domain-containing protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK20722.1 CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo var. makuwa]1.1e-3183.87Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKH
        MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCR +    F         H
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKH

XP_004143713.1 CDGSH iron-sulfur domain-containing protein NEET [Cucumis sativus]5.2e-4589.91Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
        MASI+ ISSPSSSLSTR   LL R+FNDNGRRRTVVVRAE GSSGEHINPAIRKSE+KVVDSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

XP_008467263.1 PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Cucumis melo]5.2e-53100Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
        MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

XP_023534172.1 CDGSH iron-sulfur domain-containing protein NEET [Cucurbita pepo subsp. pepo]7.3e-3187.18Show/hide
Query:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        RRR VVVRAEG  GE INPAIRKSE+KVVDSV++A+L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

XP_038876467.1 CDGSH iron-sulfur domain-containing protein NEET [Benincasa hispida]1.5e-3679.09Show/hide
Query:  MASIVAISSPSS-SLSTRAGLLLPRS-FNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATG
        MASIVAIS PSS S+++R     P S F  +GRR TVVVRA+GS GE INPAIRK+E+KVVDSVLIAELSKPLTPYCRCWRS TFPLCDGSHVKHNKATG
Subjt:  MASIVAISSPSS-SLSTRAGLLLPRS-FNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATG

Query:  DNVGPLLLKK
        DNVGPLLLK+
Subjt:  DNVGPLLLKK

TrEMBL top hitse value%identityAlignment
A0A0A0KL88 ZnF_CDGSH domain-containing protein2.5e-4589.91Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
        MASI+ ISSPSSSLSTR   LL R+FNDNGRRRTVVVRAE GSSGEHINPAIRKSE+KVVDSVL+ ELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAE-GSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGD

Query:  NVGPLLLKK
        NVGPLLLKK
Subjt:  NVGPLLLKK

A0A1S3CTC1 CDGSH iron-sulfur domain-containing protein NEET2.5e-53100Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
        MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A5A7UKN7 CDGSH iron-sulfur domain-containing protein NEET2.5e-53100Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
        MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDN

Query:  VGPLLLKK
        VGPLLLKK
Subjt:  VGPLLLKK

A0A5D3DAV1 CDGSH iron-sulfur domain-containing protein NEET5.4e-3283.87Show/hide
Query:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKH
        MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCR +    F         H
Subjt:  MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKH

A0A6J1K1P5 CDGSH iron-sulfur domain-containing protein NEET3.5e-3187.18Show/hide
Query:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        RRR VVVRAEG  GE INPAIRKSE+KVVDSV++A+L+KPLTPYCRCWRS TFPLCDGSHVKHNKATGDNVGPLLLKK
Subjt:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

SwissProt top hitse value%identityAlignment
C1BI29 CDGSH iron-sulfur domain-containing protein 2A1.8e-1659.68Show/hide
Query:  INPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I +L++    YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q6AZG1 CDGSH iron-sulfur domain-containing protein 2B1.8e-1661.29Show/hide
Query:  INPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I +L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q6PCF8 CDGSH iron-sulfur domain-containing protein 2A1.4e-1651.32Show/hide
Query:  RTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        R  +++ +      IN  I+K   KVV+ + I +L      YCRCWRS TFP+CDGSH KHN+ TGDNVGPL+LKK
Subjt:  RTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q7T326 CDGSH iron-sulfur domain-containing protein 28.1e-1761.29Show/hide
Query:  INPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        IN  I+K   KVV+ + I +L  P   YCRCWRS TFP+CD SH+KHN+ TGDNVGPL+LKK
Subjt:  INPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Q9FLI7 CDGSH iron-sulfur domain-containing protein NEET1.3e-3079.49Show/hide
Query:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        ++R VVVRAEG  G  INP IRK+E+KVVDSV++ ELSK +TPYCRCWRSGTFPLCDGSHVKHNKA GDNVGPLLLKK
Subjt:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK

Arabidopsis top hitse value%identityAlignment
AT5G51720.1 2 iron, 2 sulfur cluster binding9.2e-3279.49Show/hide
Query:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK
        ++R VVVRAEG  G  INP IRK+E+KVVDSV++ ELSK +TPYCRCWRSGTFPLCDGSHVKHNKA GDNVGPLLLKK
Subjt:  RRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCATTGTAGCCATTTCTTCTCCTTCTTCTTCCCTATCAACAAGAGCCGGCCTTCTTCTTCCTCGTAGTTTCAACGACAACGGACGACGTCGTACGGTTGTCGT
GAGAGCTGAAGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGAGAAAGTGGTGGACTCTGTGCTCATTGCTGAACTTTCCAAGCCTCTCACTCCTT
ATTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAACAAAGCAACTGGAGATAACGTTGGTCCTTTACTCTTGAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
TTAGGAAATTAGGGAAGGAGACGTGTCAAATGAAGATCCACCAATTAGGATGTGGTTTGAATTCTTGTAGTTAAAAAGCGTATGGTCTCCACACGTTCATCACCCCCTCC
ATTTCATTATACTACTTCACACCACACACACATCTGAATTGAGTTAACTATGGCATCCATTGTAGCCATTTCTTCTCCTTCTTCTTCCCTATCAACAAGAGCCGGCCTTC
TTCTTCCTCGTAGTTTCAACGACAACGGACGACGTCGTACGGTTGTCGTGAGAGCTGAAGGCAGCAGCGGCGAACATATAAACCCTGCAATCAGAAAGAGTGAAGAGAAA
GTGGTGGACTCTGTGCTCATTGCTGAACTTTCCAAGCCTCTCACTCCTTATTGCAGATGTTGGAGGTCAGGGACATTTCCTCTTTGTGATGGAAGCCATGTTAAGCACAA
CAAAGCAACTGGAGATAACGTTGGTCCTTTACTCTTGAAGAAGTAGTAGACAGACACACACATTCTCATGTTTTTCTTTTATTACTTTTTCATTCTCCAACCTCTTATTC
CATTGCTTCCTGAGTTTCAAAATGTGCTTTCCTAATCTCTCTTCCTACTTAACTTCTTCTGCTGAGAAAAACCTTTGAGGTTGTTTTAGAAATAACCACTTTTGTCTCCT
CGTAGTAGACGAAAGTATGTTTGTGAATGATTTTGAATATATCAAAAAATTCCATTTCGAAGATCATTCCCAAACTAATCTTATTCTCAGTTGGAAAGTCACTTTTATAT
GATTCATGAAGTGATAATTTACCATGTATGTTGAGAAATTTCATATCACAATAGAACCGATTTTATAAGTAATACTGAACTTGCACATTTATAATAATTTTGTTACTGAA
TGGTAATACATTTGTGTAAATTTAGCTTTAGTATTTTAAAATTCATAAACATTTCATCCATATCATGAGAGATTTTCTTGATGTTTTATTGTGTGGC
Protein sequenceShow/hide protein sequence
MASIVAISSPSSSLSTRAGLLLPRSFNDNGRRRTVVVRAEGSSGEHINPAIRKSEEKVVDSVLIAELSKPLTPYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK